RNA–Protein interactions for RNA: ENST00000429162.2

CASC4-203, Transcript of cancer susceptibility 4, humanhuman

TSL 2

Gene CASC4, Length 1,918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-203ENST00000429162 MAP3K1Q13233 1512 aa30.11■■■□□ 2.41
CASC4-203ENST00000429162 ERCC6Q03468 1493 aa30.08■■■□□ 2.41
CASC4-203ENST00000429162 TIAM1Q13009 1591 aa30.06■■■□□ 2.4
CASC4-203ENST00000429162 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.05■■■□□ 2.4
CASC4-203ENST00000429162 ADAMTS12P58397 1594 aa30.05■■■□□ 2.4
CASC4-203ENST00000429162 CCER1Q8TC90 406 aaPredicted RBP30.04■■■□□ 2.4
CASC4-203ENST00000429162 PCF11O94913 1555 aaKnown RBP30.03■■■□□ 2.4
CASC4-203ENST00000429162 KANK4Q5T7N3 995 aaPredicted RBP30.02■■■□□ 2.4
CASC4-203ENST00000429162 GRIN2BQ13224 1484 aa30.02■■■□□ 2.4
CASC4-203ENST00000429162 THOC2Q8NI27 1593 aaKnown RBP30.02■■■□□ 2.4
CASC4-203ENST00000429162 CFAP43Q8NDM7 1665 aa30■■■□□ 2.39
CASC4-203ENST00000429162 AQRO60306 1485 aaKnown RBP eCLIP30■■■□□ 2.39
CASC4-203ENST00000429162 FHOD3Q2V2M9 1422 aa30■■■□□ 2.39
CASC4-203ENST00000429162 SAMD9Q5K651 1589 aa29.99■■■□□ 2.39
CASC4-203ENST00000429162 FYCO1Q9BQS8 1478 aa29.97■■■□□ 2.39
CASC4-203ENST00000429162 RRBP1Q9P2E9 1410 aaKnown RBP29.92■■■□□ 2.38
CASC4-203ENST00000429162 FMN1Q68DA7 1419 aa29.92■■■□□ 2.38
CASC4-203ENST00000429162 ZNF608Q9ULD9 1512 aaPredicted RBP29.91■■■□□ 2.38
CASC4-203ENST00000429162 CASKIN1Q8WXD9 1431 aa29.91■■■□□ 2.38
CASC4-203ENST00000429162 P3H3Q8IVL6 736 aa29.9■■■□□ 2.38
CASC4-203ENST00000429162 HNRNPUL2Q1KMD3 747 aaKnown RBP29.89■■■□□ 2.38
CASC4-203ENST00000429162 EIF4G3O43432 1585 aaKnown RBP29.89■■■□□ 2.37
CASC4-203ENST00000429162 LRRC9Q6ZRR7 1453 aa29.89■■■□□ 2.37
CASC4-203ENST00000429162 IQGAP2Q13576 1575 aa29.83■■■□□ 2.37
CASC4-203ENST00000429162 SNAPC4Q5SXM2 1469 aa29.81■■■□□ 2.36
CASC4-203ENST00000429162 CCNB3Q8WWL7 1395 aa29.78■■■□□ 2.36
CASC4-203ENST00000429162 MAGI1Q96QZ7 1491 aaPredicted RBP29.71■■■□□ 2.35
CASC4-203ENST00000429162 ATP1B4Q9UN42 357 aaPredicted RBP29.7■■■□□ 2.34
CASC4-203ENST00000429162 UGGT2Q9NYU1 1516 aa29.68■■■□□ 2.34
CASC4-203ENST00000429162 GRIN2AQ12879 1464 aa29.67■■■□□ 2.34
CASC4-203ENST00000429162 KIAA0586Q9BVV6 1533 aa29.63■■■□□ 2.33
CASC4-203ENST00000429162 LRRIQ1Q96JM4 1722 aa29.62■■■□□ 2.33
CASC4-203ENST00000429162 PHLDB1Q86UU1 1377 aa29.62■■■□□ 2.33
CASC4-203ENST00000429162 SYNJ2O15056 1496 aa29.59■■■□□ 2.33
CASC4-203ENST00000429162 HECW1Q76N89 1606 aa29.59■■■□□ 2.33
CASC4-203ENST00000429162 CCDC18Q5T9S5 1454 aa29.57■■■□□ 2.32
CASC4-203ENST00000429162 KIAA0556O60303 1618 aa29.53■■■□□ 2.32
CASC4-203ENST00000429162 EHBP1L1Q8N3D4 1523 aa29.53■■■□□ 2.32
CASC4-203ENST00000429162 MTUS2Q5JR59 1369 aa29.52■■■□□ 2.32
CASC4-203ENST00000429162 CEP170Q5SW79 1584 aa29.47■■■□□ 2.31
CASC4-203ENST00000429162 SUPT6HQ7KZ85 1726 aaKnown RBP29.47■■■□□ 2.31
CASC4-203ENST00000429162 DISP1Q96F81 1524 aa29.47■■■□□ 2.31
CASC4-203ENST00000429162 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.46■■■□□ 2.317e-7■■■■■ 52.8
CASC4-203ENST00000429162 CHMP7Q8WUX9 453 aaPredicted RBP29.45■■■□□ 2.3
CASC4-203ENST00000429162 CLSPNQ9HAW4 1339 aa29.44■■■□□ 2.3
CASC4-203ENST00000429162 DHX57Q6P158 1386 aaKnown RBP29.42■■■□□ 2.3
CASC4-203ENST00000429162 NUP160Q12769 1436 aa29.41■■■□□ 2.3
CASC4-203ENST00000429162 FGD6Q6ZV73 1430 aa29.4■■■□□ 2.3
CASC4-203ENST00000429162 EPRSP07814 1512 aaKnown RBP29.4■■■□□ 2.3
CASC4-203ENST00000429162 ITGAEP38570 1179 aa29.39■■■□□ 2.3
CASC4-203ENST00000429162 NCOA2Q15596 1464 aa29.39■■■□□ 2.3
CASC4-203ENST00000429162 FAM50AQ14320 339 aaKnown RBP29.38■■■□□ 2.29
CASC4-203ENST00000429162 MAGI3Q5TCQ9 1506 aa29.35■■■□□ 2.29
CASC4-203ENST00000429162 ARHGEF11O15085 1522 aa29.34■■■□□ 2.29
CASC4-203ENST00000429162 MYOM3Q5VTT5 1437 aa29.33■■■□□ 2.29
CASC4-203ENST00000429162 RAPGEF6Q8TEU7 1601 aa29.31■■■□□ 2.28
CASC4-203ENST00000429162 SETD5Q9C0A6 1442 aa29.31■■■□□ 2.28
CASC4-203ENST00000429162 CDK13Q14004 1512 aaKnown RBP29.3■■■□□ 2.28
CASC4-203ENST00000429162 RAB3GAP2Q9H2M9 1393 aa29.3■■■□□ 2.28
CASC4-203ENST00000429162 FBLN2P98095 1184 aa29.3■■■□□ 2.28
CASC4-203ENST00000429162 CARMIL2Q6F5E8 1435 aa29.26■■■□□ 2.27
CASC4-203ENST00000429162 NUP153P49790 1475 aaKnown RBP29.23■■■□□ 2.27
CASC4-203ENST00000429162 PTPN23Q9H3S7 1636 aa29.21■■■□□ 2.27
CASC4-203ENST00000429162 TCOF1Q13428 1488 aaKnown RBP29.16■■■□□ 2.26
CASC4-203ENST00000429162 JPH4Q96JJ6 628 aa29.16■■■□□ 2.26
CASC4-203ENST00000429162 CHD1O14646 1710 aa29.12■■■□□ 2.25
CASC4-203ENST00000429162 MIA2Q96PC5 1412 aa29.11■■■□□ 2.25
CASC4-203ENST00000429162 MAPKBP1O60336 1514 aa29.08■■■□□ 2.25
CASC4-203ENST00000429162 PLB1Q6P1J6 1458 aa29.08■■■□□ 2.25
CASC4-203ENST00000429162 CDK11AQ9UQ88 783 aaPredicted RBP29.07■■■□□ 2.24
CASC4-203ENST00000429162 ZNF316A6NFI3 1004 aaPredicted RBP29.06■■■□□ 2.24
CASC4-203ENST00000429162 ARID3CA6NKF2 412 aa29.06■■■□□ 2.24
CASC4-203ENST00000429162 HFM1A2PYH4 1435 aa29.06■■■□□ 2.24
CASC4-203ENST00000429162 PTPRKQ15262 1439 aa29.04■■■□□ 2.24
CASC4-203ENST00000429162 ABCA8O94911 1581 aa29.03■■■□□ 2.24
CASC4-203ENST00000429162 TROQ12816 1431 aaPredicted RBP29■■■□□ 2.23
CASC4-203ENST00000429162 ADCY10Q96PN6 1610 aa28.99■■■□□ 2.23
CASC4-203ENST00000429162 PRG4Q92954 1404 aaPredicted RBP28.96■■■□□ 2.23
CASC4-203ENST00000429162 SHROOM2Q13796 1616 aa28.95■■■□□ 2.23
CASC4-203ENST00000429162 NAIPQ13075 1403 aa28.95■■■□□ 2.22
CASC4-203ENST00000429162 AKNAQ7Z591 1439 aa28.95■■■□□ 2.22
CASC4-203ENST00000429162 GCC2Q8IWJ2 1684 aa28.95■■■□□ 2.22
CASC4-203ENST00000429162 DIEXFQ68CQ4 756 aaKnown RBP28.94■■■□□ 2.22
CASC4-203ENST00000429162 ITSN2Q9NZM3 1697 aa28.94■■■□□ 2.22
CASC4-203ENST00000429162 UACAQ9BZF9 1416 aa28.88■■■□□ 2.21
CASC4-203ENST00000429162 DNMT1P26358 1616 aaKnown RBP28.86■■■□□ 2.21
CASC4-203ENST00000429162 KIF14Q15058 1648 aa28.86■■■□□ 2.21
CASC4-203ENST00000429162 PTPRGP23470 1445 aa28.85■■■□□ 2.21
CASC4-203ENST00000429162 ATP10BO94823 1461 aa28.83■■■□□ 2.21
CASC4-203ENST00000429162 DAPK1P53355 1430 aa28.81■■■□□ 2.2
CASC4-203ENST00000429162 GPATCH8Q9UKJ3 1502 aaKnown RBP28.78■■■□□ 2.2
CASC4-203ENST00000429162 ROCK1Q13464 1354 aa28.77■■■□□ 2.2
CASC4-203ENST00000429162 CAMSAP2Q08AD1 1489 aa28.76■■■□□ 2.2
CASC4-203ENST00000429162 CLASP1Q7Z460 1538 aa28.76■■■□□ 2.19
CASC4-203ENST00000429162 PLEKHD1A6NEE1 506 aa28.75■■■□□ 2.19
CASC4-203ENST00000429162 ABCC5O15440 1437 aa28.74■■■□□ 2.19
CASC4-203ENST00000429162 TIMELESSQ9UNS1 1208 aa28.74■■■□□ 2.19
CASC4-203ENST00000429162 CHIC2Q9UKJ5 165 aa28.73■■■□□ 2.19
CASC4-203ENST00000429162 RRP7BPQ9NSQ0 103 aa28.73■■■□□ 2.19
CASC4-203ENST00000429162 ABCC10Q5T3U5 1492 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms