RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 RUSC2Q8N2Y8 1516 aa32.51■■■□□ 2.79
UPK3BP1-201ENST00000428678 NPM1P06748 294 aaKnown RBP eCLIP32.37■■■□□ 2.77
UPK3BP1-201ENST00000428678 FAM69CQ0P6D2 419 aa32.33■■■□□ 2.77
UPK3BP1-201ENST00000428678 ABCC10Q5T3U5 1492 aa32.31■■■□□ 2.76
UPK3BP1-201ENST00000428678 ADCY10Q96PN6 1610 aa32.3■■■□□ 2.76
UPK3BP1-201ENST00000428678 MAPKBP1O60336 1514 aa32.29■■■□□ 2.76
UPK3BP1-201ENST00000428678 KIAA0586Q9BVV6 1533 aa32.29■■■□□ 2.76
UPK3BP1-201ENST00000428678 IGF1RP08069 1367 aa32.28■■■□□ 2.76
UPK3BP1-201ENST00000428678 KIF27Q86VH2 1401 aa32.27■■■□□ 2.76
UPK3BP1-201ENST00000428678 CUL7Q14999 1698 aa32.26■■■□□ 2.75
UPK3BP1-201ENST00000428678 DIP2BQ9P265 1576 aa32.24■■■□□ 2.75
UPK3BP1-201ENST00000428678 CARMIL1Q5VZK9 1371 aa32.08■■■□□ 2.73
UPK3BP1-201ENST00000428678 TSPOAP1O95153 1857 aa32.08■■■□□ 2.73
UPK3BP1-201ENST00000428678 TTBK1Q5TCY1 1321 aaPredicted RBP32.08■■■□□ 2.73
UPK3BP1-201ENST00000428678 PTPRGP23470 1445 aa32.08■■■□□ 2.73
UPK3BP1-201ENST00000428678 KDM6BO15054 1643 aa32.06■■■□□ 2.72
UPK3BP1-201ENST00000428678 CARMIL2Q6F5E8 1435 aa32■■■□□ 2.71
UPK3BP1-201ENST00000428678 TNIKQ9UKE5 1360 aa31.98■■■□□ 2.71
UPK3BP1-201ENST00000428678 IQGAP2Q13576 1575 aa31.96■■■□□ 2.71
UPK3BP1-201ENST00000428678 ABCC2Q92887 1545 aa31.94■■■□□ 2.7
UPK3BP1-201ENST00000428678 ASXL2Q76L83 1435 aa31.87■■■□□ 2.69
UPK3BP1-201ENST00000428678 PLB1Q6P1J6 1458 aa31.85■■■□□ 2.69
UPK3BP1-201ENST00000428678 KDM4FA0A1W2PPD8 638 aa31.85■■■□□ 2.69
UPK3BP1-201ENST00000428678 UHRF1BP1LA0JNW5 1464 aa31.83■■■□□ 2.69
UPK3BP1-201ENST00000428678 DISP1Q96F81 1524 aa31.81■■■□□ 2.68
UPK3BP1-201ENST00000428678 UACAQ9BZF9 1416 aa31.81■■■□□ 2.68
UPK3BP1-201ENST00000428678 GLI2P10070 1586 aa31.79■■■□□ 2.68
UPK3BP1-201ENST00000428678 PPRC1Q5VV67 1664 aaKnown RBP31.76■■■□□ 2.68
UPK3BP1-201ENST00000428678 RAPGEF2Q9Y4G8 1499 aa31.75■■■□□ 2.67
UPK3BP1-201ENST00000428678 UGGT2Q9NYU1 1516 aa31.72■■■□□ 2.67
UPK3BP1-201ENST00000428678 KDM5BQ9UGL1 1544 aa31.69■■■□□ 2.66
UPK3BP1-201ENST00000428678 EPRSP07814 1512 aaKnown RBP31.67■■■□□ 2.66
UPK3BP1-201ENST00000428678 KIAA0556O60303 1618 aa31.67■■■□□ 2.66
UPK3BP1-201ENST00000428678 ZCCHC11Q5TAX3 1644 aaKnown RBP31.65■■■□□ 2.66
UPK3BP1-201ENST00000428678 MAP3K4Q9Y6R4 1608 aa31.62■■■□□ 2.65
UPK3BP1-201ENST00000428678 TEX14Q8IWB6 1497 aa31.58■■■□□ 2.65
UPK3BP1-201ENST00000428678 COL17A1Q9UMD9 1497 aaPredicted RBP31.57■■■□□ 2.64
UPK3BP1-201ENST00000428678 ADGRL1O94910 1474 aa31.55■■■□□ 2.64
UPK3BP1-201ENST00000428678 CTTNBP2Q8WZ74 1663 aa31.53■■■□□ 2.64
UPK3BP1-201ENST00000428678 WDR7Q9Y4E6 1490 aa31.51■■■□□ 2.63
UPK3BP1-201ENST00000428678 GOLGA3Q08378 1498 aa31.46■■■□□ 2.63
UPK3BP1-201ENST00000428678 ABCA8O94911 1581 aa31.39■■■□□ 2.61
UPK3BP1-201ENST00000428678 KCNH8Q96L42 1107 aa31.37■■■□□ 2.61
UPK3BP1-201ENST00000428678 CD109Q6YHK3 1445 aa31.35■■■□□ 2.61
UPK3BP1-201ENST00000428678 CFAP43Q8NDM7 1665 aa31.35■■■□□ 2.61
UPK3BP1-201ENST00000428678 PRXQ9BXM0 1461 aa31.33■■■□□ 2.61
UPK3BP1-201ENST00000428678 MAGI3Q5TCQ9 1506 aa31.32■■■□□ 2.6
UPK3BP1-201ENST00000428678 ILDR1Q86SU0 546 aaPredicted RBP31.23■■■□□ 2.59
UPK3BP1-201ENST00000428678 HECW2Q9P2P5 1572 aa31.22■■■□□ 2.59
UPK3BP1-201ENST00000428678 ARID3CA6NKF2 412 aa31.21■■■□□ 2.59
UPK3BP1-201ENST00000428678 FAM9AQ8IZU1 332 aaPredicted RBP31.21■■■□□ 2.59
UPK3BP1-201ENST00000428678 P3H3Q8IVL6 736 aa31.19■■■□□ 2.58
UPK3BP1-201ENST00000428678 ATP10BO94823 1461 aa31.13■■■□□ 2.57
UPK3BP1-201ENST00000428678 KIF21BO75037 1637 aa31.11■■■□□ 2.57
UPK3BP1-201ENST00000428678 ARAP3Q8WWN8 1544 aa31.08■■■□□ 2.57
UPK3BP1-201ENST00000428678 ABCA9Q8IUA7 1624 aa31.04■■■□□ 2.56
UPK3BP1-201ENST00000428678 SAMD9Q5K651 1589 aa31.04■■■□□ 2.56
UPK3BP1-201ENST00000428678 CSRNP3Q8WYN3 585 aa31.02■■■□□ 2.56
UPK3BP1-201ENST00000428678 RAPGEF6Q8TEU7 1601 aa31.01■■■□□ 2.55
UPK3BP1-201ENST00000428678 PHLDB1Q86UU1 1377 aa30.98■■■□□ 2.55
UPK3BP1-201ENST00000428678 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.98■■■□□ 2.55
UPK3BP1-201ENST00000428678 HNRNPUL2Q1KMD3 747 aaKnown RBP30.98■■■□□ 2.55
UPK3BP1-201ENST00000428678 RAPGEF3O95398 923 aa30.92■■■□□ 2.54
UPK3BP1-201ENST00000428678 NEO1Q92859 1461 aa30.91■■■□□ 2.54
UPK3BP1-201ENST00000428678 RANGAP1P46060 587 aaPredicted RBP30.91■■■□□ 2.54
UPK3BP1-201ENST00000428678 NUP153P49790 1475 aaKnown RBP30.88■■■□□ 2.53
UPK3BP1-201ENST00000428678 FHOD3Q2V2M9 1422 aa30.85■■■□□ 2.53
UPK3BP1-201ENST00000428678 ADAMTSL3P82987 1691 aa30.84■■■□□ 2.53
UPK3BP1-201ENST00000428678 FRMPD1Q5SYB0 1578 aa30.83■■■□□ 2.53
UPK3BP1-201ENST00000428678 PTPRMP28827 1452 aa30.82■■■□□ 2.53
UPK3BP1-201ENST00000428678 EEA1Q15075 1411 aa30.81■■■□□ 2.52
UPK3BP1-201ENST00000428678 ARID4BQ4LE39 1312 aaPredicted RBP30.79■■■□□ 2.52
UPK3BP1-201ENST00000428678 BCORL1Q5H9F3 1711 aa30.76■■■□□ 2.52
UPK3BP1-201ENST00000428678 PLEKHD1A6NEE1 506 aa30.76■■■□□ 2.51
UPK3BP1-201ENST00000428678 MADDQ8WXG6 1647 aa30.73■■■□□ 2.51
UPK3BP1-201ENST00000428678 DENND4BO75064 1496 aaPredicted RBP30.71■■■□□ 2.51
UPK3BP1-201ENST00000428678 ARHGEF40Q8TER5 1519 aa30.7■■■□□ 2.51
UPK3BP1-201ENST00000428678 RICTORQ6R327 1708 aa30.68■■■□□ 2.5
UPK3BP1-201ENST00000428678 AKNAQ7Z591 1439 aa30.68■■■□□ 2.5
UPK3BP1-201ENST00000428678 FANCAO15360 1455 aa30.68■■■□□ 2.5
UPK3BP1-201ENST00000428678 EFCAB5A4FU69 1503 aa30.68■■■□□ 2.5
UPK3BP1-201ENST00000428678 CFAP74Q9C0B2 1584 aa30.67■■■□□ 2.5
UPK3BP1-201ENST00000428678 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.66■■■□□ 2.5
UPK3BP1-201ENST00000428678 TTC37Q6PGP7 1564 aa30.63■■■□□ 2.49
UPK3BP1-201ENST00000428678 PCF11O94913 1555 aaKnown RBP30.62■■■□□ 2.49
UPK3BP1-201ENST00000428678 RIMS1Q86UR5 1692 aaKnown RBP30.62■■■□□ 2.49
UPK3BP1-201ENST00000428678 FBXO41Q8TF61 875 aa30.59■■■□□ 2.49
UPK3BP1-201ENST00000428678 CDK13Q14004 1512 aaKnown RBP30.58■■■□□ 2.49
UPK3BP1-201ENST00000428678 LMTK3Q96Q04 1460 aa30.57■■■□□ 2.48
UPK3BP1-201ENST00000428678 ZMYM4Q5VZL5 1548 aa30.56■■■□□ 2.48
UPK3BP1-201ENST00000428678 ZFYVE16Q7Z3T8 1539 aa30.54■■■□□ 2.48
UPK3BP1-201ENST00000428678 POGZQ7Z3K3 1410 aa30.54■■■□□ 2.48
UPK3BP1-201ENST00000428678 YEATS2Q9ULM3 1422 aa30.52■■■□□ 2.48
UPK3BP1-201ENST00000428678 PLPPR3Q6T4P5 718 aa30.51■■■□□ 2.47
UPK3BP1-201ENST00000428678 EHMT2Q96KQ7 1210 aa30.49■■■□□ 2.47
UPK3BP1-201ENST00000428678 MAGI2Q86UL8 1455 aa30.48■■■□□ 2.47
UPK3BP1-201ENST00000428678 SIGLEC1Q9BZZ2 1709 aa30.47■■■□□ 2.47
UPK3BP1-201ENST00000428678 ATP1B4Q9UN42 357 aaPredicted RBP30.47■■■□□ 2.47
UPK3BP1-201ENST00000428678 HECW1Q76N89 1606 aa30.47■■■□□ 2.47
UPK3BP1-201ENST00000428678 PLCH2O75038 1416 aa30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms