RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 PRG4Q92954 1404 aaPredicted RBP13.64□□□□□ -0.23
SMARCAL1-206ENST00000427645 JPH4Q96JJ6 628 aa13.64□□□□□ -0.23
SMARCAL1-206ENST00000427645 ERICH3Q5RHP9 1530 aa13.62□□□□□ -0.23
SMARCAL1-206ENST00000427645 SHROOM2Q13796 1616 aa13.61□□□□□ -0.23
SMARCAL1-206ENST00000427645 EEA1Q15075 1411 aa13.56□□□□□ -0.24
SMARCAL1-206ENST00000427645 FAM69CQ0P6D2 419 aa13.55□□□□□ -0.24
SMARCAL1-206ENST00000427645 NPM1P06748 294 aaKnown RBP eCLIP13.53□□□□□ -0.24
SMARCAL1-206ENST00000427645 TTBK1Q5TCY1 1321 aaPredicted RBP13.53□□□□□ -0.24
SMARCAL1-206ENST00000427645 IGF1RP08069 1367 aa13.52□□□□□ -0.25
SMARCAL1-206ENST00000427645 RUSC2Q8N2Y8 1516 aa13.52□□□□□ -0.25
SMARCAL1-206ENST00000427645 ADRA2BP18089 450 aa13.5□□□□□ -0.25
SMARCAL1-206ENST00000427645 PPP6R1Q9UPN7 881 aa13.5□□□□□ -0.25
SMARCAL1-206ENST00000427645 KIF13AQ9H1H9 1805 aa13.5□□□□□ -0.25
SMARCAL1-206ENST00000427645 KIF27Q86VH2 1401 aa13.49□□□□□ -0.25
SMARCAL1-206ENST00000427645 FAM9AQ8IZU1 332 aaPredicted RBP13.48□□□□□ -0.25
SMARCAL1-206ENST00000427645 CSRNP3Q8WYN3 585 aa13.48□□□□□ -0.25
SMARCAL1-206ENST00000427645 ABCC10Q5T3U5 1492 aa13.47□□□□□ -0.25
SMARCAL1-206ENST00000427645 KIAA0586Q9BVV6 1533 aa13.46□□□□□ -0.25
SMARCAL1-206ENST00000427645 ADCY10Q96PN6 1610 aa13.46□□□□□ -0.26
SMARCAL1-206ENST00000427645 MAPKBP1O60336 1514 aa13.42□□□□□ -0.26
SMARCAL1-206ENST00000427645 CARMIL1Q5VZK9 1371 aa13.42□□□□□ -0.26
SMARCAL1-206ENST00000427645 DIP2BQ9P265 1576 aa13.41□□□□□ -0.26
SMARCAL1-206ENST00000427645 PTPRGP23470 1445 aa13.41□□□□□ -0.26
SMARCAL1-206ENST00000427645 KDM4FA0A1W2PPD8 638 aa13.38□□□□□ -0.27
SMARCAL1-206ENST00000427645 CUL7Q14999 1698 aa13.37□□□□□ -0.27
SMARCAL1-206ENST00000427645 TNIKQ9UKE5 1360 aa13.34□□□□□ -0.27
SMARCAL1-206ENST00000427645 TSPOAP1O95153 1857 aa13.34□□□□□ -0.27
SMARCAL1-206ENST00000427645 LOC105371045A0A1W2PR82 267 aa13.34□□□□□ -0.27
SMARCAL1-206ENST00000427645 KDM6BO15054 1643 aa13.34□□□□□ -0.27
SMARCAL1-206ENST00000427645 CARMIL2Q6F5E8 1435 aa13.33□□□□□ -0.28
SMARCAL1-206ENST00000427645 KIF21BO75037 1637 aa13.31□□□□□ -0.28
SMARCAL1-206ENST00000427645 ASXL2Q76L83 1435 aa13.31□□□□□ -0.28
SMARCAL1-206ENST00000427645 ABCC2Q92887 1545 aa13.31□□□□□ -0.28
SMARCAL1-206ENST00000427645 PRXQ9BXM0 1461 aa13.3□□□□□ -0.28
SMARCAL1-206ENST00000427645 IQGAP2Q13576 1575 aa13.3□□□□□ -0.28
SMARCAL1-206ENST00000427645 GOLGA3Q08378 1498 aa13.29□□□□□ -0.28
SMARCAL1-206ENST00000427645 DISP1Q96F81 1524 aa13.29□□□□□ -0.28
SMARCAL1-206ENST00000427645 UBTFP17480 764 aaKnown RBP13.28□□□□□ -0.28
SMARCAL1-206ENST00000427645 UACAQ9BZF9 1416 aa13.27□□□□□ -0.29
SMARCAL1-206ENST00000427645 RAPGEF2Q9Y4G8 1499 aa13.27□□□□□ -0.29
SMARCAL1-206ENST00000427645 PLB1Q6P1J6 1458 aa13.25□□□□□ -0.29
SMARCAL1-206ENST00000427645 UHRF1BP1LA0JNW5 1464 aa13.24□□□□□ -0.29
SMARCAL1-206ENST00000427645 EHMT2Q96KQ7 1210 aa13.24□□□□□ -0.29
SMARCAL1-206ENST00000427645 COL17A1Q9UMD9 1497 aaPredicted RBP13.23□□□□□ -0.29
SMARCAL1-206ENST00000427645 PPRC1Q5VV67 1664 aaKnown RBP13.21□□□□□ -0.29
SMARCAL1-206ENST00000427645 EPRSP07814 1512 aaKnown RBP13.21□□□□□ -0.29
SMARCAL1-206ENST00000427645 GLI2P10070 1586 aa13.2□□□□□ -0.3
SMARCAL1-206ENST00000427645 UGGT2Q9NYU1 1516 aa13.2□□□□□ -0.3
SMARCAL1-206ENST00000427645 KDM5BQ9UGL1 1544 aa13.2□□□□□ -0.3
SMARCAL1-206ENST00000427645 KCNH8Q96L42 1107 aa13.19□□□□□ -0.3
SMARCAL1-206ENST00000427645 KIAA0556O60303 1618 aa13.18□□□□□ -0.3
SMARCAL1-206ENST00000427645 ARID3CA6NKF2 412 aa13.18□□□□□ -0.3
SMARCAL1-206ENST00000427645 ZCCHC11Q5TAX3 1644 aaKnown RBP13.17□□□□□ -0.3
SMARCAL1-206ENST00000427645 ADGRL1O94910 1474 aa13.16□□□□□ -0.3
SMARCAL1-206ENST00000427645 P3H3Q8IVL6 736 aa13.15□□□□□ -0.3
SMARCAL1-206ENST00000427645 MAP3K4Q9Y6R4 1608 aa13.14□□□□□ -0.31
SMARCAL1-206ENST00000427645 WDR7Q9Y4E6 1490 aa13.13□□□□□ -0.31
SMARCAL1-206ENST00000427645 TEX14Q8IWB6 1497 aa13.11□□□□□ -0.31
SMARCAL1-206ENST00000427645 ILDR1Q86SU0 546 aaPredicted RBP13.11□□□□□ -0.31
SMARCAL1-206ENST00000427645 CD109Q6YHK3 1445 aa13.1□□□□□ -0.31
SMARCAL1-206ENST00000427645 CEP162Q5TB80 1403 aa13.09□□□□□ -0.31
SMARCAL1-206ENST00000427645 CTTNBP2Q8WZ74 1663 aa13.08□□□□□ -0.31
SMARCAL1-206ENST00000427645 ABCA8O94911 1581 aa13.07□□□□□ -0.32
SMARCAL1-206ENST00000427645 RANGAP1P46060 587 aaPredicted RBP13.07□□□□□ -0.32
SMARCAL1-206ENST00000427645 CLIP1P30622 1438 aa13.05□□□□□ -0.32
SMARCAL1-206ENST00000427645 PIAS4Q8N2W9 510 aaPredicted RBP13.05□□□□□ -0.32
SMARCAL1-206ENST00000427645 MAGI3Q5TCQ9 1506 aa13.03□□□□□ -0.32
SMARCAL1-206ENST00000427645 ATP10BO94823 1461 aa13.02□□□□□ -0.33
SMARCAL1-206ENST00000427645 HECW2Q9P2P5 1572 aa13.02□□□□□ -0.33
SMARCAL1-206ENST00000427645 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.01□□□□□ -0.33
SMARCAL1-206ENST00000427645 HNRNPUL2Q1KMD3 747 aaKnown RBP13.01□□□□□ -0.33
SMARCAL1-206ENST00000427645 CFAP43Q8NDM7 1665 aa12.99□□□□□ -0.33
SMARCAL1-206ENST00000427645 EFCAB5A4FU69 1503 aa12.99□□□□□ -0.33
SMARCAL1-206ENST00000427645 MSH5O43196 834 aa12.99□□□□□ -0.33
SMARCAL1-206ENST00000427645 RAPGEF3O95398 923 aa12.99□□□□□ -0.33
SMARCAL1-206ENST00000427645 ARHGAP35Q9NRY4 1499 aa12.97□□□□□ -0.33
SMARCAL1-206ENST00000427645 ARAP3Q8WWN8 1544 aa12.94□□□□□ -0.34
SMARCAL1-206ENST00000427645 SAMD9Q5K651 1589 aa12.93□□□□□ -0.34
SMARCAL1-206ENST00000427645 FHOD3Q2V2M9 1422 aa12.92□□□□□ -0.34
SMARCAL1-206ENST00000427645 VPS8Q8N3P4 1428 aa12.92□□□□□ -0.34
SMARCAL1-206ENST00000427645 NUP153P49790 1475 aaKnown RBP12.91□□□□□ -0.34
SMARCAL1-206ENST00000427645 ARID4BQ4LE39 1312 aaPredicted RBP12.9□□□□□ -0.34
SMARCAL1-206ENST00000427645 FMN1Q68DA7 1419 aa12.9□□□□□ -0.34
SMARCAL1-206ENST00000427645 APLP2Q06481 763 aa12.9□□□□□ -0.34
SMARCAL1-206ENST00000427645 ABCA9Q8IUA7 1624 aa12.9□□□□□ -0.34
SMARCAL1-206ENST00000427645 RAPGEF6Q8TEU7 1601 aa12.9□□□□□ -0.34
SMARCAL1-206ENST00000427645 PLEKHD1A6NEE1 506 aa12.88□□□□□ -0.35
SMARCAL1-206ENST00000427645 PTPRMP28827 1452 aa12.87□□□□□ -0.35
SMARCAL1-206ENST00000427645 PHLDB1Q86UU1 1377 aa12.86□□□□□ -0.35
SMARCAL1-206ENST00000427645 NEO1Q92859 1461 aa12.85□□□□□ -0.35
SMARCAL1-206ENST00000427645 FRMPD1Q5SYB0 1578 aa12.85□□□□□ -0.35
SMARCAL1-206ENST00000427645 ATP1B4Q9UN42 357 aaPredicted RBP12.84□□□□□ -0.35
SMARCAL1-206ENST00000427645 ADAMTSL3P82987 1691 aa12.83□□□□□ -0.36
SMARCAL1-206ENST00000427645 CASKIN1Q8WXD9 1431 aa12.82□□□□□ -0.36
SMARCAL1-206ENST00000427645 AKNAQ7Z591 1439 aa12.81□□□□□ -0.36
SMARCAL1-206ENST00000427645 FANCAO15360 1455 aa12.8□□□□□ -0.36
SMARCAL1-206ENST00000427645 DENND4BO75064 1496 aaPredicted RBP12.8□□□□□ -0.36
SMARCAL1-206ENST00000427645 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.8□□□□□ -0.36
SMARCAL1-206ENST00000427645 HSPA2P54652 639 aa12.8□□□□□ -0.36
SMARCAL1-206ENST00000427645 MLECQ14165 292 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms