RNA–Protein interactions for RNA: ENST00000427234.5

ITSN2-207, Transcript of intersectin 2, humanhuman

TSL 3

Gene ITSN2, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-207ENST00000427234 ADRA2BP18089 450 aa19.04■□□□□ 0.64
ITSN2-207ENST00000427234 KIF27Q86VH2 1401 aa19.01■□□□□ 0.63
ITSN2-207ENST00000427234 IGF1RP08069 1367 aa19■□□□□ 0.63
ITSN2-207ENST00000427234 CEP170Q5SW79 1584 aa18.98■□□□□ 0.63
ITSN2-207ENST00000427234 JPH4Q96JJ6 628 aa18.9■□□□□ 0.62
ITSN2-207ENST00000427234 SHROOM2Q13796 1616 aa18.87■□□□□ 0.61
ITSN2-207ENST00000427234 CARMIL1Q5VZK9 1371 aa18.87■□□□□ 0.61
ITSN2-207ENST00000427234 ERCC6L2Q5T890 1561 aa18.86■□□□□ 0.61
ITSN2-207ENST00000427234 CUL7Q14999 1698 aa18.85■□□□□ 0.61
ITSN2-207ENST00000427234 PRG4Q92954 1404 aaPredicted RBP18.84■□□□□ 0.61
ITSN2-207ENST00000427234 TRHP20396 242 aaPredicted RBP18.83■□□□□ 0.6
ITSN2-207ENST00000427234 KIAA0586Q9BVV6 1533 aa18.81■□□□□ 0.6
ITSN2-207ENST00000427234 RUSC2Q8N2Y8 1516 aa18.8■□□□□ 0.6
ITSN2-207ENST00000427234 RAPGEF2Q9Y4G8 1499 aa18.7■□□□□ 0.58
ITSN2-207ENST00000427234 PIAS4Q8N2W9 510 aaPredicted RBP18.68■□□□□ 0.58
ITSN2-207ENST00000427234 CARMIL2Q6F5E8 1435 aa18.63■□□□□ 0.57
ITSN2-207ENST00000427234 IQGAP2Q13576 1575 aa18.62■□□□□ 0.57
ITSN2-207ENST00000427234 PTPRGP23470 1445 aa18.6■□□□□ 0.57
ITSN2-207ENST00000427234 NPM1P06748 294 aaKnown RBP eCLIP18.6■□□□□ 0.57
ITSN2-207ENST00000427234 TNIKQ9UKE5 1360 aa18.59■□□□□ 0.57
ITSN2-207ENST00000427234 PRXQ9BXM0 1461 aa18.58■□□□□ 0.57
ITSN2-207ENST00000427234 UGGT2Q9NYU1 1516 aa18.54■□□□□ 0.56
ITSN2-207ENST00000427234 CSRNP3Q8WYN3 585 aa18.54■□□□□ 0.56
ITSN2-207ENST00000427234 DISP1Q96F81 1524 aa18.54■□□□□ 0.56
ITSN2-207ENST00000427234 ADCY10Q96PN6 1610 aa18.53■□□□□ 0.56
ITSN2-207ENST00000427234 TTBK1Q5TCY1 1321 aaPredicted RBP18.52■□□□□ 0.56
ITSN2-207ENST00000427234 EEA1Q15075 1411 aa18.49■□□□□ 0.55
ITSN2-207ENST00000427234 MAPKBP1O60336 1514 aa18.49■□□□□ 0.55
ITSN2-207ENST00000427234 FAM69CQ0P6D2 419 aa18.47■□□□□ 0.55
ITSN2-207ENST00000427234 UACAQ9BZF9 1416 aa18.47■□□□□ 0.55
ITSN2-207ENST00000427234 ABCC10Q5T3U5 1492 aa18.46■□□□□ 0.55
ITSN2-207ENST00000427234 UHRF1BP1LA0JNW5 1464 aa18.46■□□□□ 0.54
ITSN2-207ENST00000427234 ABCC2Q92887 1545 aa18.44■□□□□ 0.54
ITSN2-207ENST00000427234 KIAA0556O60303 1618 aa18.44■□□□□ 0.54
ITSN2-207ENST00000427234 GOLGA3Q08378 1498 aa18.43■□□□□ 0.54
ITSN2-207ENST00000427234 CTTNBP2Q8WZ74 1663 aa18.43■□□□□ 0.54
ITSN2-207ENST00000427234 KIF13AQ9H1H9 1805 aa18.4■□□□□ 0.54
ITSN2-207ENST00000427234 FAM9AQ8IZU1 332 aaPredicted RBP18.39■□□□□ 0.53
ITSN2-207ENST00000427234 DIP2BQ9P265 1576 aa18.37■□□□□ 0.53
ITSN2-207ENST00000427234 PLB1Q6P1J6 1458 aa18.36■□□□□ 0.53
ITSN2-207ENST00000427234 ASXL2Q76L83 1435 aa18.36■□□□□ 0.53
ITSN2-207ENST00000427234 KDM5BQ9UGL1 1544 aa18.35■□□□□ 0.53
ITSN2-207ENST00000427234 MSH5O43196 834 aa18.33■□□□□ 0.52
ITSN2-207ENST00000427234 P3H3Q8IVL6 736 aa18.3■□□□□ 0.52
ITSN2-207ENST00000427234 ABCA8O94911 1581 aa18.27■□□□□ 0.52
ITSN2-207ENST00000427234 GLI2P10070 1586 aa18.25■□□□□ 0.51
ITSN2-207ENST00000427234 KIF21BO75037 1637 aa18.25■□□□□ 0.51
ITSN2-207ENST00000427234 ZCCHC11Q5TAX3 1644 aaKnown RBP18.25■□□□□ 0.51
ITSN2-207ENST00000427234 EPRSP07814 1512 aaKnown RBP18.24■□□□□ 0.51
ITSN2-207ENST00000427234 SAMD9Q5K651 1589 aa18.24■□□□□ 0.51
ITSN2-207ENST00000427234 RANGAP1P46060 587 aaPredicted RBP18.22■□□□□ 0.51
ITSN2-207ENST00000427234 WDR7Q9Y4E6 1490 aa18.21■□□□□ 0.51
ITSN2-207ENST00000427234 TSPOAP1O95153 1857 aa18.19■□□□□ 0.5
ITSN2-207ENST00000427234 UBTFP17480 764 aaKnown RBP18.19■□□□□ 0.5
ITSN2-207ENST00000427234 ATP10BO94823 1461 aa18.16■□□□□ 0.5
ITSN2-207ENST00000427234 KCNH8Q96L42 1107 aa18.16■□□□□ 0.5
ITSN2-207ENST00000427234 FHOD3Q2V2M9 1422 aa18.15■□□□□ 0.5
ITSN2-207ENST00000427234 EHMT2Q96KQ7 1210 aa18.15■□□□□ 0.5
ITSN2-207ENST00000427234 ARID3CA6NKF2 412 aa18.14■□□□□ 0.49
ITSN2-207ENST00000427234 KDM6BO15054 1643 aa18.13■□□□□ 0.49
ITSN2-207ENST00000427234 EFCAB5A4FU69 1503 aa18.13■□□□□ 0.49
ITSN2-207ENST00000427234 MAP3K4Q9Y6R4 1608 aa18.12■□□□□ 0.49
ITSN2-207ENST00000427234 PPRC1Q5VV67 1664 aaKnown RBP18.12■□□□□ 0.49
ITSN2-207ENST00000427234 TEX14Q8IWB6 1497 aa18.11■□□□□ 0.49
ITSN2-207ENST00000427234 RAPGEF6Q8TEU7 1601 aa18.1■□□□□ 0.49
ITSN2-207ENST00000427234 CD109Q6YHK3 1445 aa18.1■□□□□ 0.49
ITSN2-207ENST00000427234 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.08■□□□□ 0.48
ITSN2-207ENST00000427234 HNRNPUL2Q1KMD3 747 aaKnown RBP18.08■□□□□ 0.48
ITSN2-207ENST00000427234 NUP153P49790 1475 aaKnown RBP18.07■□□□□ 0.48
ITSN2-207ENST00000427234 MAGI3Q5TCQ9 1506 aa18.06■□□□□ 0.48
ITSN2-207ENST00000427234 COL17A1Q9UMD9 1497 aaPredicted RBP18.04■□□□□ 0.48
ITSN2-207ENST00000427234 CFAP43Q8NDM7 1665 aa18.03■□□□□ 0.48
ITSN2-207ENST00000427234 PLEKHD1A6NEE1 506 aa18.02■□□□□ 0.48
ITSN2-207ENST00000427234 ARHGAP35Q9NRY4 1499 aa18.01■□□□□ 0.47
ITSN2-207ENST00000427234 FMN1Q68DA7 1419 aa18■□□□□ 0.47
ITSN2-207ENST00000427234 PHLDB1Q86UU1 1377 aa17.96■□□□□ 0.47
ITSN2-207ENST00000427234 ABCA9Q8IUA7 1624 aa17.96■□□□□ 0.47
ITSN2-207ENST00000427234 ATP1B4Q9UN42 357 aaPredicted RBP17.94■□□□□ 0.46
ITSN2-207ENST00000427234 KDM4FA0A1W2PPD8 638 aa17.92■□□□□ 0.46
ITSN2-207ENST00000427234 ARAP3Q8WWN8 1544 aa17.92■□□□□ 0.46
ITSN2-207ENST00000427234 CDK13Q14004 1512 aaKnown RBP17.9■□□□□ 0.46
ITSN2-207ENST00000427234 CDK11AQ9UQ88 783 aaPredicted RBP17.9■□□□□ 0.46
ITSN2-207ENST00000427234 NEO1Q92859 1461 aa17.89■□□□□ 0.45
ITSN2-207ENST00000427234 HECW1Q76N89 1606 aa17.88■□□□□ 0.45
ITSN2-207ENST00000427234 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.85■□□□□ 0.45
ITSN2-207ENST00000427234 CLIP1P30622 1438 aa17.84■□□□□ 0.45
ITSN2-207ENST00000427234 CASKIN1Q8WXD9 1431 aa17.83■□□□□ 0.45
ITSN2-207ENST00000427234 RAPGEF3O95398 923 aa17.83■□□□□ 0.44
ITSN2-207ENST00000427234 AKNAQ7Z591 1439 aa17.81■□□□□ 0.44
ITSN2-207ENST00000427234 FANCAO15360 1455 aa17.8■□□□□ 0.44
ITSN2-207ENST00000427234 PLCH2O75038 1416 aa17.8■□□□□ 0.44
ITSN2-207ENST00000427234 TROQ12816 1431 aaPredicted RBP17.8■□□□□ 0.44
ITSN2-207ENST00000427234 TTC37Q6PGP7 1564 aa17.79■□□□□ 0.44
ITSN2-207ENST00000427234 ADGRL1O94910 1474 aa17.79■□□□□ 0.44
ITSN2-207ENST00000427234 DENND4BO75064 1496 aaPredicted RBP17.76■□□□□ 0.43
ITSN2-207ENST00000427234 CCDC18Q5T9S5 1454 aa17.76■□□□□ 0.43
ITSN2-207ENST00000427234 FYCO1Q9BQS8 1478 aa17.75■□□□□ 0.43
ITSN2-207ENST00000427234 PCF11O94913 1555 aaKnown RBP17.75■□□□□ 0.43
ITSN2-207ENST00000427234 EFCAB2Q5VUJ9 269 aa17.75■□□□□ 0.43
ITSN2-207ENST00000427234 CFAP74Q9C0B2 1584 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms