RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 KDM6BO15054 1643 aa22.53■■□□□ 1.2
SGCE-203ENST00000425444 JPH4Q96JJ6 628 aa22.51■■□□□ 1.19
SGCE-203ENST00000425444 DIP2BQ9P265 1576 aa22.5■■□□□ 1.19
SGCE-203ENST00000425444 WRNQ14191 1432 aaPredicted RBP eCLIP22.49■■□□□ 1.19
SGCE-203ENST00000425444 MAPKBP1O60336 1514 aa22.48■■□□□ 1.19
SGCE-203ENST00000425444 TSPOAP1O95153 1857 aa22.45■■□□□ 1.18
SGCE-203ENST00000425444 ERICH3Q5RHP9 1530 aa22.39■■□□□ 1.17
SGCE-203ENST00000425444 ADCY10Q96PN6 1610 aa22.39■■□□□ 1.17
SGCE-203ENST00000425444 RUSC2Q8N2Y8 1516 aa22.31■■□□□ 1.16
SGCE-203ENST00000425444 ADGRL1O94910 1474 aa22.3■■□□□ 1.16
SGCE-203ENST00000425444 TOP2BQ02880 1626 aa22.28■■□□□ 1.16
SGCE-203ENST00000425444 BIVM-ERCC5R4GMW8 1640 aa22.27■■□□□ 1.16
SGCE-203ENST00000425444 HECW2Q9P2P5 1572 aa22.25■■□□□ 1.15
SGCE-203ENST00000425444 TTBK1Q5TCY1 1321 aaPredicted RBP22.16■■□□□ 1.14
SGCE-203ENST00000425444 KIAA0586Q9BVV6 1533 aa22.14■■□□□ 1.13
SGCE-203ENST00000425444 PTPRGP23470 1445 aa22.13■■□□□ 1.13
SGCE-203ENST00000425444 PPRC1Q5VV67 1664 aaKnown RBP22.12■■□□□ 1.13
SGCE-203ENST00000425444 ASXL2Q76L83 1435 aa22.1■■□□□ 1.13
SGCE-203ENST00000425444 PLB1Q6P1J6 1458 aa22.09■■□□□ 1.13
SGCE-203ENST00000425444 ABCC2Q92887 1545 aa22.08■■□□□ 1.13
SGCE-203ENST00000425444 COL17A1Q9UMD9 1497 aaPredicted RBP22.08■■□□□ 1.12
SGCE-203ENST00000425444 GLI2P10070 1586 aa22.08■■□□□ 1.12
SGCE-203ENST00000425444 FBXO41Q8TF61 875 aa22.06■■□□□ 1.12
SGCE-203ENST00000425444 TNIKQ9UKE5 1360 aa21.99■■□□□ 1.11
SGCE-203ENST00000425444 CUL7Q14999 1698 aa21.98■■□□□ 1.11
SGCE-203ENST00000425444 CARMIL2Q6F5E8 1435 aa21.97■■□□□ 1.11
SGCE-203ENST00000425444 TEX14Q8IWB6 1497 aa21.97■■□□□ 1.11
SGCE-203ENST00000425444 IGF1RP08069 1367 aa21.96■■□□□ 1.11
SGCE-203ENST00000425444 EPRSP07814 1512 aaKnown RBP21.95■■□□□ 1.1
SGCE-203ENST00000425444 MAP3K4Q9Y6R4 1608 aa21.93■■□□□ 1.1
SGCE-203ENST00000425444 UHRF1BP1LA0JNW5 1464 aa21.92■■□□□ 1.1
SGCE-203ENST00000425444 UACAQ9BZF9 1416 aa21.9■■□□□ 1.1
SGCE-203ENST00000425444 KIF27Q86VH2 1401 aa21.87■■□□□ 1.09
SGCE-203ENST00000425444 KDM5BQ9UGL1 1544 aa21.84■■□□□ 1.09
SGCE-203ENST00000425444 CARMIL1Q5VZK9 1371 aa21.81■■□□□ 1.08
SGCE-203ENST00000425444 IQGAP2Q13576 1575 aa21.81■■□□□ 1.08
SGCE-203ENST00000425444 ZCCHC11Q5TAX3 1644 aaKnown RBP21.8■■□□□ 1.08
SGCE-203ENST00000425444 DISP1Q96F81 1524 aa21.76■■□□□ 1.07
SGCE-203ENST00000425444 WDR7Q9Y4E6 1490 aa21.74■■□□□ 1.07
SGCE-203ENST00000425444 KIF21BO75037 1637 aa21.73■■□□□ 1.07
SGCE-203ENST00000425444 CD109Q6YHK3 1445 aa21.72■■□□□ 1.07
SGCE-203ENST00000425444 LMTK3Q96Q04 1460 aa21.72■■□□□ 1.07
SGCE-203ENST00000425444 KCNH8Q96L42 1107 aa21.7■■□□□ 1.06
SGCE-203ENST00000425444 MAGI3Q5TCQ9 1506 aa21.7■■□□□ 1.06
SGCE-203ENST00000425444 PTPRMP28827 1452 aa21.66■■□□□ 1.06
SGCE-203ENST00000425444 CFAP43Q8NDM7 1665 aa21.65■■□□□ 1.06
SGCE-203ENST00000425444 UGGT2Q9NYU1 1516 aa21.63■■□□□ 1.05
SGCE-203ENST00000425444 KIAA0556O60303 1618 aa21.61■■□□□ 1.05
SGCE-203ENST00000425444 ADAMTSL3P82987 1691 aa21.58■■□□□ 1.05
SGCE-203ENST00000425444 PCF11O94913 1555 aaKnown RBP21.57■■□□□ 1.04
SGCE-203ENST00000425444 ARAP3Q8WWN8 1544 aa21.55■■□□□ 1.04
SGCE-203ENST00000425444 ARID4BQ4LE39 1312 aaPredicted RBP21.52■■□□□ 1.03
SGCE-203ENST00000425444 RAPGEF2Q9Y4G8 1499 aa21.51■■□□□ 1.03
SGCE-203ENST00000425444 SOCS7O14512 581 aa21.49■■□□□ 1.03
SGCE-203ENST00000425444 ILDR2Q71H61 639 aa21.49■■□□□ 1.03
SGCE-203ENST00000425444 DISP3Q9P2K9 1392 aa21.48■■□□□ 1.03
SGCE-203ENST00000425444 RAPGEF3O95398 923 aa21.48■■□□□ 1.03
SGCE-203ENST00000425444 HSPA2P54652 639 aa21.47■■□□□ 1.03
SGCE-203ENST00000425444 CERKQ8TCT0 537 aa21.47■■□□□ 1.03
SGCE-203ENST00000425444 MADDQ8WXG6 1647 aa21.47■■□□□ 1.03
SGCE-203ENST00000425444 BCORL1Q5H9F3 1711 aa21.46■■□□□ 1.03
SGCE-203ENST00000425444 ABCA8O94911 1581 aa21.45■■□□□ 1.02
SGCE-203ENST00000425444 PHLDB1Q86UU1 1377 aa21.44■■□□□ 1.02
SGCE-203ENST00000425444 ARID3CA6NKF2 412 aa21.42■■□□□ 1.02
SGCE-203ENST00000425444 GOLGA3Q08378 1498 aa21.4■■□□□ 1.02
SGCE-203ENST00000425444 PLPPR3Q6T4P5 718 aa21.4■■□□□ 1.02
SGCE-203ENST00000425444 RIMS1Q86UR5 1692 aaKnown RBP21.37■■□□□ 1.01
SGCE-203ENST00000425444 PRXQ9BXM0 1461 aa21.34■■□□□ 1.01
SGCE-203ENST00000425444 ABCA9Q8IUA7 1624 aa21.33■■□□□ 1.01
SGCE-203ENST00000425444 NEO1Q92859 1461 aa21.33■■□□□ 1.01
SGCE-203ENST00000425444 CTTNBP2Q8WZ74 1663 aa21.33■■□□□ 1
SGCE-203ENST00000425444 FAM9AQ8IZU1 332 aaPredicted RBP21.32■■□□□ 1
SGCE-203ENST00000425444 ATP10BO94823 1461 aa21.31■■□□□ 1
SGCE-203ENST00000425444 FRMPD1Q5SYB0 1578 aa21.3■■□□□ 1
SGCE-203ENST00000425444 EEA1Q15075 1411 aa21.28■■□□□ 1
SGCE-203ENST00000425444 CSRNP3Q8WYN3 585 aa21.27■■□□□ 1
SGCE-203ENST00000425444 ARHGEF40Q8TER5 1519 aa21.26■□□□□ 0.99
SGCE-203ENST00000425444 POGZQ7Z3K3 1410 aa21.24■□□□□ 0.99
SGCE-203ENST00000425444 P3H3Q8IVL6 736 aa21.23■□□□□ 0.99
SGCE-203ENST00000425444 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.22■□□□□ 0.99
SGCE-203ENST00000425444 HNRNPUL2Q1KMD3 747 aaKnown RBP21.22■□□□□ 0.99
SGCE-203ENST00000425444 FANCAO15360 1455 aa21.2■□□□□ 0.98
SGCE-203ENST00000425444 SPATA31D1Q6ZQQ2 1576 aa21.2■□□□□ 0.98
SGCE-203ENST00000425444 DENND4BO75064 1496 aaPredicted RBP21.2■□□□□ 0.98
SGCE-203ENST00000425444 MLECQ14165 292 aa21.19■□□□□ 0.98
SGCE-203ENST00000425444 AKNAQ7Z591 1439 aa21.18■□□□□ 0.98
SGCE-203ENST00000425444 RICTORQ6R327 1708 aa21.16■□□□□ 0.98
SGCE-203ENST00000425444 CHIC1Q5VXU3 224 aa21.16■□□□□ 0.98
SGCE-203ENST00000425444 FHOD3Q2V2M9 1422 aa21.14■□□□□ 0.98
SGCE-203ENST00000425444 DMRT2Q9Y5R5 561 aa21.14■□□□□ 0.97
SGCE-203ENST00000425444 FER1L4A9Z1Z3 1794 aa21.13■□□□□ 0.97
SGCE-203ENST00000425444 YEATS2Q9ULM3 1422 aa21.12■□□□□ 0.97
SGCE-203ENST00000425444 SIGLEC1Q9BZZ2 1709 aa21.11■□□□□ 0.97
SGCE-203ENST00000425444 ZFYVE16Q7Z3T8 1539 aa21.1■□□□□ 0.97
SGCE-203ENST00000425444 TTC37Q6PGP7 1564 aa21.1■□□□□ 0.97
SGCE-203ENST00000425444 RAPGEF6Q8TEU7 1601 aa21.08■□□□□ 0.97
SGCE-203ENST00000425444 PREX1Q8TCU6 1659 aa21.08■□□□□ 0.96
SGCE-203ENST00000425444 EFCAB5A4FU69 1503 aa21.08■□□□□ 0.96
SGCE-203ENST00000425444 ZMYM4Q5VZL5 1548 aa21.07■□□□□ 0.96
SGCE-203ENST00000425444 CFAP74Q9C0B2 1584 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms