RNA–Protein interactions for RNA: ENST00000425430.5

HDAC11-210, Transcript of histone deacetylase 11, humanhuman

TSL 2

Gene HDAC11, Length 1,021 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-210ENST00000425430 JPH4Q96JJ6 628 aa26.9■■□□□ 1.9
HDAC11-210ENST00000425430 ADCY10Q96PN6 1610 aa26.76■■□□□ 1.87
HDAC11-210ENST00000425430 NPM1P06748 294 aaKnown RBP eCLIP26.76■■□□□ 1.87
HDAC11-210ENST00000425430 MAPKBP1O60336 1514 aa26.75■■□□□ 1.87
HDAC11-210ENST00000425430 ABCC10Q5T3U5 1492 aa26.75■■□□□ 1.87
HDAC11-210ENST00000425430 FAM69CQ0P6D2 419 aa26.74■■□□□ 1.87
HDAC11-210ENST00000425430 DIP2BQ9P265 1576 aa26.73■■□□□ 1.87
HDAC11-210ENST00000425430 CUL7Q14999 1698 aa26.72■■□□□ 1.87
HDAC11-210ENST00000425430 KIAA0586Q9BVV6 1533 aa26.7■■□□□ 1.86
HDAC11-210ENST00000425430 KIF27Q86VH2 1401 aa26.68■■□□□ 1.86
HDAC11-210ENST00000425430 IGF1RP08069 1367 aa26.65■■□□□ 1.86
HDAC11-210ENST00000425430 KDM6BO15054 1643 aa26.6■■□□□ 1.85
HDAC11-210ENST00000425430 TSPOAP1O95153 1857 aa26.59■■□□□ 1.85
HDAC11-210ENST00000425430 TTBK1Q5TCY1 1321 aaPredicted RBP26.55■■□□□ 1.84
HDAC11-210ENST00000425430 PTPRGP23470 1445 aa26.52■■□□□ 1.84
HDAC11-210ENST00000425430 CARMIL1Q5VZK9 1371 aa26.5■■□□□ 1.83
HDAC11-210ENST00000425430 CARMIL2Q6F5E8 1435 aa26.47■■□□□ 1.83
HDAC11-210ENST00000425430 IQGAP2Q13576 1575 aa26.46■■□□□ 1.83
HDAC11-210ENST00000425430 TNIKQ9UKE5 1360 aa26.46■■□□□ 1.83
HDAC11-210ENST00000425430 ABCC2Q92887 1545 aa26.44■■□□□ 1.82
HDAC11-210ENST00000425430 ASXL2Q76L83 1435 aa26.38■■□□□ 1.81
HDAC11-210ENST00000425430 KDM4FA0A1W2PPD8 638 aa26.36■■□□□ 1.81
HDAC11-210ENST00000425430 PLB1Q6P1J6 1458 aa26.36■■□□□ 1.81
HDAC11-210ENST00000425430 PPRC1Q5VV67 1664 aaKnown RBP26.34■■□□□ 1.81
HDAC11-210ENST00000425430 GLI2P10070 1586 aa26.33■■□□□ 1.8
HDAC11-210ENST00000425430 UHRF1BP1LA0JNW5 1464 aa26.32■■□□□ 1.8
HDAC11-210ENST00000425430 DISP1Q96F81 1524 aa26.32■■□□□ 1.8
HDAC11-210ENST00000425430 UACAQ9BZF9 1416 aa26.31■■□□□ 1.8
HDAC11-210ENST00000425430 RAPGEF2Q9Y4G8 1499 aa26.25■■□□□ 1.79
HDAC11-210ENST00000425430 UGGT2Q9NYU1 1516 aa26.24■■□□□ 1.79
HDAC11-210ENST00000425430 KIAA0556O60303 1618 aa26.23■■□□□ 1.79
HDAC11-210ENST00000425430 ZCCHC11Q5TAX3 1644 aaKnown RBP26.23■■□□□ 1.79
HDAC11-210ENST00000425430 KDM5BQ9UGL1 1544 aa26.22■■□□□ 1.79
HDAC11-210ENST00000425430 EPRSP07814 1512 aaKnown RBP26.21■■□□□ 1.79
HDAC11-210ENST00000425430 MAP3K4Q9Y6R4 1608 aa26.21■■□□□ 1.79
HDAC11-210ENST00000425430 ADGRL1O94910 1474 aa26.17■■□□□ 1.78
HDAC11-210ENST00000425430 TEX14Q8IWB6 1497 aa26.15■■□□□ 1.78
HDAC11-210ENST00000425430 CTTNBP2Q8WZ74 1663 aa26.13■■□□□ 1.77
HDAC11-210ENST00000425430 COL17A1Q9UMD9 1497 aaPredicted RBP26.12■■□□□ 1.77
HDAC11-210ENST00000425430 WDR7Q9Y4E6 1490 aa26.09■■□□□ 1.77
HDAC11-210ENST00000425430 GOLGA3Q08378 1498 aa26.02■■□□□ 1.76
HDAC11-210ENST00000425430 ABCA8O94911 1581 aa25.98■■□□□ 1.75
HDAC11-210ENST00000425430 CFAP43Q8NDM7 1665 aa25.97■■□□□ 1.75
HDAC11-210ENST00000425430 CD109Q6YHK3 1445 aa25.94■■□□□ 1.74
HDAC11-210ENST00000425430 HECW2Q9P2P5 1572 aa25.92■■□□□ 1.74
HDAC11-210ENST00000425430 KCNH8Q96L42 1107 aa25.92■■□□□ 1.74
HDAC11-210ENST00000425430 MAGI3Q5TCQ9 1506 aa25.92■■□□□ 1.74
HDAC11-210ENST00000425430 PRXQ9BXM0 1461 aa25.88■■□□□ 1.73
HDAC11-210ENST00000425430 ILDR1Q86SU0 546 aaPredicted RBP25.88■■□□□ 1.73
HDAC11-210ENST00000425430 ARID3CA6NKF2 412 aa25.83■■□□□ 1.73
HDAC11-210ENST00000425430 KIF21BO75037 1637 aa25.82■■□□□ 1.72
HDAC11-210ENST00000425430 P3H3Q8IVL6 736 aa25.77■■□□□ 1.72
HDAC11-210ENST00000425430 FAM9AQ8IZU1 332 aaPredicted RBP25.75■■□□□ 1.71
HDAC11-210ENST00000425430 ATP10BO94823 1461 aa25.73■■□□□ 1.71
HDAC11-210ENST00000425430 ARAP3Q8WWN8 1544 aa25.71■■□□□ 1.71
HDAC11-210ENST00000425430 ABCA9Q8IUA7 1624 aa25.7■■□□□ 1.71
HDAC11-210ENST00000425430 SAMD9Q5K651 1589 aa25.69■■□□□ 1.7
HDAC11-210ENST00000425430 RAPGEF6Q8TEU7 1601 aa25.68■■□□□ 1.7
HDAC11-210ENST00000425430 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.61■■□□□ 1.69
HDAC11-210ENST00000425430 HNRNPUL2Q1KMD3 747 aaKnown RBP25.61■■□□□ 1.69
HDAC11-210ENST00000425430 PHLDB1Q86UU1 1377 aa25.59■■□□□ 1.69
HDAC11-210ENST00000425430 CHIC1Q5VXU3 224 aa25.59■■□□□ 1.69
HDAC11-210ENST00000425430 CSRNP3Q8WYN3 585 aa25.58■■□□□ 1.69
HDAC11-210ENST00000425430 NEO1Q92859 1461 aa25.58■■□□□ 1.69
HDAC11-210ENST00000425430 RAPGEF3O95398 923 aa25.57■■□□□ 1.68
HDAC11-210ENST00000425430 ADAMTSL3P82987 1691 aa25.56■■□□□ 1.68
HDAC11-210ENST00000425430 RANGAP1P46060 587 aaPredicted RBP25.56■■□□□ 1.68
HDAC11-210ENST00000425430 FRMPD1Q5SYB0 1578 aa25.56■■□□□ 1.68
HDAC11-210ENST00000425430 NUP153P49790 1475 aaKnown RBP25.54■■□□□ 1.68
HDAC11-210ENST00000425430 PTPRMP28827 1452 aa25.53■■□□□ 1.68
HDAC11-210ENST00000425430 FHOD3Q2V2M9 1422 aa25.53■■□□□ 1.68
HDAC11-210ENST00000425430 BCORL1Q5H9F3 1711 aa25.5■■□□□ 1.67
HDAC11-210ENST00000425430 ARID4BQ4LE39 1312 aaPredicted RBP25.48■■□□□ 1.67
HDAC11-210ENST00000425430 MADDQ8WXG6 1647 aa25.48■■□□□ 1.67
HDAC11-210ENST00000425430 EEA1Q15075 1411 aa25.47■■□□□ 1.67
HDAC11-210ENST00000425430 ARHGEF40Q8TER5 1519 aa25.47■■□□□ 1.67
HDAC11-210ENST00000425430 CFAP74Q9C0B2 1584 aa25.43■■□□□ 1.66
HDAC11-210ENST00000425430 RICTORQ6R327 1708 aa25.43■■□□□ 1.66
HDAC11-210ENST00000425430 DENND4BO75064 1496 aaPredicted RBP25.41■■□□□ 1.66
HDAC11-210ENST00000425430 RIMS1Q86UR5 1692 aaKnown RBP25.4■■□□□ 1.66
HDAC11-210ENST00000425430 PLEKHD1A6NEE1 506 aa25.4■■□□□ 1.66
HDAC11-210ENST00000425430 FANCAO15360 1455 aa25.39■■□□□ 1.65
HDAC11-210ENST00000425430 PCF11O94913 1555 aaKnown RBP25.39■■□□□ 1.65
HDAC11-210ENST00000425430 TTC37Q6PGP7 1564 aa25.39■■□□□ 1.65
HDAC11-210ENST00000425430 EFCAB5A4FU69 1503 aa25.38■■□□□ 1.65
HDAC11-210ENST00000425430 AKNAQ7Z591 1439 aa25.37■■□□□ 1.65
HDAC11-210ENST00000425430 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.37■■□□□ 1.65
HDAC11-210ENST00000425430 LMTK3Q96Q04 1460 aa25.34■■□□□ 1.65
HDAC11-210ENST00000425430 FBXO41Q8TF61 875 aa25.33■■□□□ 1.65
HDAC11-210ENST00000425430 CDK13Q14004 1512 aaKnown RBP25.32■■□□□ 1.64
HDAC11-210ENST00000425430 ZMYM4Q5VZL5 1548 aa25.31■■□□□ 1.64
HDAC11-210ENST00000425430 ZFYVE16Q7Z3T8 1539 aa25.31■■□□□ 1.64
HDAC11-210ENST00000425430 PLPPR3Q6T4P5 718 aa25.28■■□□□ 1.64
HDAC11-210ENST00000425430 POGZQ7Z3K3 1410 aa25.28■■□□□ 1.64
HDAC11-210ENST00000425430 SIGLEC1Q9BZZ2 1709 aa25.27■■□□□ 1.64
HDAC11-210ENST00000425430 YEATS2Q9ULM3 1422 aa25.26■■□□□ 1.63
HDAC11-210ENST00000425430 HECW1Q76N89 1606 aa25.24■■□□□ 1.63
HDAC11-210ENST00000425430 EHMT2Q96KQ7 1210 aa25.22■■□□□ 1.63
HDAC11-210ENST00000425430 MAGI2Q86UL8 1455 aa25.21■■□□□ 1.63
HDAC11-210ENST00000425430 FER1L4A9Z1Z3 1794 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms