RNA–Protein interactions for RNA: ENST00000424362.5

BRPF1-203, Transcript of bromodomain and PHD finger containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene BRPF1, Length 4,712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1-203ENST00000424362 VPS8Q8N3P4 1428 aa23.53■■□□□ 1.36
BRPF1-203ENST00000424362 SIN3AQ96ST3 1273 aa23.52■■□□□ 1.36
BRPF1-203ENST00000424362 NBR1Q14596 966 aa23.5■■□□□ 1.35
BRPF1-203ENST00000424362 NEFMP07197 916 aa23.49■■□□□ 1.35
BRPF1-203ENST00000424362 TSPY4P0CV99 314 aa23.49■■□□□ 1.35
BRPF1-203ENST00000424362 TSPY10P0CW01 314 aa23.49■■□□□ 1.35
BRPF1-203ENST00000424362 KDM2AQ9Y2K7 1162 aa23.46■■□□□ 1.35
BRPF1-203ENST00000424362 ABCC8Q09428 1581 aa23.44■■□□□ 1.34
BRPF1-203ENST00000424362 TIMELESSQ9UNS1 1208 aa23.43■■□□□ 1.34
BRPF1-203ENST00000424362 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.42■■□□□ 1.34
BRPF1-203ENST00000424362 UPF2Q9HAU5 1272 aaKnown RBP23.38■■□□□ 1.33
BRPF1-203ENST00000424362 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.37■■□□□ 1.332e-7■■□□□ 13.3
BRPF1-203ENST00000424362 WDR43Q15061 677 aaKnown RBP eCLIP23.36■■□□□ 1.33
BRPF1-203ENST00000424362 BCL11AQ9H165 835 aa23.36■■□□□ 1.33
BRPF1-203ENST00000424362 WIZO95785 1651 aa23.36■■□□□ 1.33
BRPF1-203ENST00000424362 TOP2AP11388 1531 aaKnown RBP23.35■■□□□ 1.33
BRPF1-203ENST00000424362 FHAD1B1AJZ9 1412 aa23.35■■□□□ 1.33
BRPF1-203ENST00000424362 CHMP7Q8WUX9 453 aaPredicted RBP23.34■■□□□ 1.33
BRPF1-203ENST00000424362 KANK4Q5T7N3 995 aaPredicted RBP23.31■■□□□ 1.32
BRPF1-203ENST00000424362 PPP4R2Q9NY27 417 aa23.31■■□□□ 1.32
BRPF1-203ENST00000424362 CCER2I3L3R5 266 aa23.31■■□□□ 1.32
BRPF1-203ENST00000424362 CHGAP10645 457 aaKnown RBP23.29■■□□□ 1.32
BRPF1-203ENST00000424362 CARMIL1Q5VZK9 1371 aa23.29■■□□□ 1.32
BRPF1-203ENST00000424362 SETD5Q9C0A6 1442 aa23.27■■□□□ 1.32
BRPF1-203ENST00000424362 SMARCA2P51531 1590 aa23.27■■□□□ 1.32
BRPF1-203ENST00000424362 CUX2O14529 1486 aa23.26■■□□□ 1.31
BRPF1-203ENST00000424362 EIF5BO60841 1220 aaKnown RBP23.26■■□□□ 1.31
BRPF1-203ENST00000424362 HSP90AA1P07900 732 aaKnown RBP23.21■■□□□ 1.31
BRPF1-203ENST00000424362 CFDP1Q9UEE9 299 aaPredicted RBP23.2■■□□□ 1.3
BRPF1-203ENST00000424362 PLEKHD1A6NEE1 506 aa23.18■■□□□ 1.3
BRPF1-203ENST00000424362 RAB3GAP2Q9H2M9 1393 aa23.17■■□□□ 1.3
BRPF1-203ENST00000424362 CARD11Q9BXL7 1154 aa23.17■■□□□ 1.3
BRPF1-203ENST00000424362 SENP3-EIF4A1A0A087X0R7 540 aa23.16■■□□□ 1.3
BRPF1-203ENST00000424362 DDRGK1Q96HY6 314 aa23.16■■□□□ 1.3
BRPF1-203ENST00000424362 ANP32BQ92688 251 aaKnown RBP23.14■■□□□ 1.3
BRPF1-203ENST00000424362 SLC24A1O60721 1099 aa23.13■■□□□ 1.29
BRPF1-203ENST00000424362 RGL3Q3MIN7 710 aa23.13■■□□□ 1.29
BRPF1-203ENST00000424362 RBM19Q9Y4C8 960 aaKnown RBP23.12■■□□□ 1.29
BRPF1-203ENST00000424362 B4GALNT3Q6L9W6 998 aa23.11■■□□□ 1.29
BRPF1-203ENST00000424362 NPM1P06748 294 aaKnown RBP eCLIP23.1■■□□□ 1.29
BRPF1-203ENST00000424362 ARHGAP35Q9NRY4 1499 aa23.08■■□□□ 1.29
BRPF1-203ENST00000424362 SMARCA4P51532 1647 aa23.07■■□□□ 1.28
BRPF1-203ENST00000424362 HSPA5P11021 654 aaKnown RBP23.05■■□□□ 1.28
BRPF1-203ENST00000424362 PPP1R15AO75807 674 aaPredicted RBP23.05■■□□□ 1.28
BRPF1-203ENST00000424362 NOP58Q9Y2X3 529 aaKnown RBP23.05■■□□□ 1.28
BRPF1-203ENST00000424362 TSHZ2Q9NRE2 1034 aa23.04■■□□□ 1.28
BRPF1-203ENST00000424362 PPM1GO15355 546 aaPredicted RBP23.01■■□□□ 1.27
BRPF1-203ENST00000424362 CDCA8Q53HL2 280 aa23.01■■□□□ 1.27
BRPF1-203ENST00000424362 DHX57Q6P158 1386 aaKnown RBP23.01■■□□□ 1.27
BRPF1-203ENST00000424362 ERICH6BQ5W0A0 696 aa23.01■■□□□ 1.27
BRPF1-203ENST00000424362 STAG3Q9UJ98 1225 aa23.01■■□□□ 1.27
BRPF1-203ENST00000424362 KNSTRNQ9Y448 316 aa23.01■■□□□ 1.27
BRPF1-203ENST00000424362 RAPGEF2Q9Y4G8 1499 aa23.01■■□□□ 1.27
BRPF1-203ENST00000424362 BECN1Q14457 450 aa22.99■■□□□ 1.27
BRPF1-203ENST00000424362 RUSC2Q8N2Y8 1516 aa22.99■■□□□ 1.27
BRPF1-203ENST00000424362 ATAD2BQ9ULI0 1458 aa22.98■■□□□ 1.27
BRPF1-203ENST00000424362 ARXQ96QS3 562 aa22.96■■□□□ 1.27
BRPF1-203ENST00000424362 KCNH8Q96L42 1107 aa22.92■■□□□ 1.26
BRPF1-203ENST00000424362 ESF1Q9H501 851 aaKnown RBP22.91■■□□□ 1.26
BRPF1-203ENST00000424362 FMN1Q68DA7 1419 aa22.91■■□□□ 1.26
BRPF1-203ENST00000424362 EIF4G1Q04637 1599 aaKnown RBP22.89■■□□□ 1.25
BRPF1-203ENST00000424362 LAS1LQ9Y4W2 734 aaKnown RBP22.88■■□□□ 1.25
BRPF1-203ENST00000424362 DCAF11Q8TEB1 546 aa22.86■■□□□ 1.25
BRPF1-203ENST00000424362 GLIPR1L2Q4G1C9 344 aa22.86■■□□□ 1.25
BRPF1-203ENST00000424362 CADPSQ9ULU8 1353 aa22.85■■□□□ 1.25
BRPF1-203ENST00000424362 MPHOSPH9Q99550 1183 aa22.85■■□□□ 1.25
BRPF1-203ENST00000424362 CFAP53Q96M91 514 aa22.84■■□□□ 1.25
BRPF1-203ENST00000424362 FOXD1Q16676 465 aa22.83■■□□□ 1.25
BRPF1-203ENST00000424362 CC2D1BQ5T0F9 858 aaKnown RBP22.83■■□□□ 1.25
BRPF1-203ENST00000424362 MYH16Q9H6N6 1097 aa22.82■■□□□ 1.24
BRPF1-203ENST00000424362 RGS3P49796 1198 aa22.82■■□□□ 1.24
BRPF1-203ENST00000424362 PDS5BQ9NTI5 1447 aa22.79■■□□□ 1.24
BRPF1-203ENST00000424362 TMF1P82094 1093 aa22.79■■□□□ 1.24
BRPF1-203ENST00000424362 PKD2Q13563 968 aa22.78■■□□□ 1.24
BRPF1-203ENST00000424362 TDRD9Q8NDG6 1382 aaKnown RBP22.78■■□□□ 1.24
BRPF1-203ENST00000424362 DEKP35659 375 aaKnown RBP22.77■■□□□ 1.24
BRPF1-203ENST00000424362 L3MBTL2Q969R5 705 aa22.76■■□□□ 1.23
BRPF1-203ENST00000424362 ERCC6Q03468 1493 aa22.75■■□□□ 1.23
BRPF1-203ENST00000424362 NEUROD2Q15784 382 aa22.75■■□□□ 1.23
BRPF1-203ENST00000424362 FHOD3Q2V2M9 1422 aa22.74■■□□□ 1.23
BRPF1-203ENST00000424362 FTSJ3Q8IY81 847 aaKnown RBP22.72■■□□□ 1.23
BRPF1-203ENST00000424362 FRAT1Q92837 279 aaPredicted RBP22.69■■□□□ 1.22
BRPF1-203ENST00000424362 RCAN3Q9UKA8 241 aa22.68■■□□□ 1.22
BRPF1-203ENST00000424362 NUDCQ9Y266 331 aa22.68■■□□□ 1.22
BRPF1-203ENST00000424362 KTN1Q86UP2 1357 aaKnown RBP22.68■■□□□ 1.22
BRPF1-203ENST00000424362 TRIM44Q96DX7 344 aaPredicted RBP22.68■■□□□ 1.22
BRPF1-203ENST00000424362 GOLGA6L22H0YM25 854 aa22.68■■□□□ 1.22
BRPF1-203ENST00000424362 RALBP1Q15311 655 aa22.68■■□□□ 1.22
BRPF1-203ENST00000424362 TCERG1O14776 1098 aaKnown RBP22.65■■□□□ 1.22
BRPF1-203ENST00000424362 RTN4Q9NQC3 1192 aaKnown RBP22.64■■□□□ 1.21
BRPF1-203ENST00000424362 MAPK8IP3Q9UPT6 1336 aa22.62■■□□□ 1.21
BRPF1-203ENST00000424362 CARMIL2Q6F5E8 1435 aa22.62■■□□□ 1.21
BRPF1-203ENST00000424362 NUP155O75694 1391 aa22.61■■□□□ 1.21
BRPF1-203ENST00000424362 SENP3Q9H4L4 574 aaPredicted RBP22.6■■□□□ 1.21
BRPF1-203ENST00000424362 MS4A1P11836 297 aa22.59■■□□□ 1.21
BRPF1-203ENST00000424362 TNNT2P45379 298 aaPredicted RBP22.59■■□□□ 1.21
BRPF1-203ENST00000424362 ANKRD30AQ9BXX3 1397 aa22.58■■□□□ 1.21
BRPF1-203ENST00000424362 PRKRIP1Q9H875 184 aaPredicted RBP22.56■■□□□ 1.2
BRPF1-203ENST00000424362 ROCK2O75116 1388 aaKnown RBP22.56■■□□□ 1.2
BRPF1-203ENST00000424362 IPO9Q96P70 1041 aaKnown RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms