RNA–Protein interactions for RNA: ENST00000424089.5

POLR1A-204, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-204ENST00000424089 PRG4Q92954 1404 aaPredicted RBP16.21■□□□□ 0.19
POLR1A-204ENST00000424089 KDM4FA0A1W2PPD8 638 aa16.21■□□□□ 0.19
POLR1A-204ENST00000424089 FAM69CQ0P6D2 419 aa16.21■□□□□ 0.19
POLR1A-204ENST00000424089 NPM1P06748 294 aaKnown RBP eCLIP16.2■□□□□ 0.18
POLR1A-204ENST00000424089 LOC105371045A0A1W2PR82 267 aa16.18■□□□□ 0.18
POLR1A-204ENST00000424089 JPH4Q96JJ6 628 aa16.17■□□□□ 0.18
POLR1A-204ENST00000424089 ABCC10Q5T3U5 1492 aa16.15■□□□□ 0.18
POLR1A-204ENST00000424089 MAPKBP1O60336 1514 aa16.14■□□□□ 0.17
POLR1A-204ENST00000424089 RUSC2Q8N2Y8 1516 aa16.12■□□□□ 0.17
POLR1A-204ENST00000424089 DIP2BQ9P265 1576 aa16.11■□□□□ 0.17
POLR1A-204ENST00000424089 KDM6BO15054 1643 aa16.09■□□□□ 0.17
POLR1A-204ENST00000424089 EEA1Q15075 1411 aa16.09■□□□□ 0.17
POLR1A-204ENST00000424089 ADCY10Q96PN6 1610 aa16.08■□□□□ 0.16
POLR1A-204ENST00000424089 TSPOAP1O95153 1857 aa16.06■□□□□ 0.16
POLR1A-204ENST00000424089 FAM9AQ8IZU1 332 aaPredicted RBP16.04■□□□□ 0.16
POLR1A-204ENST00000424089 KIAA0586Q9BVV6 1533 aa16■□□□□ 0.15
POLR1A-204ENST00000424089 CUL7Q14999 1698 aa15.99■□□□□ 0.15
POLR1A-204ENST00000424089 PTPRGP23470 1445 aa15.93■□□□□ 0.14
POLR1A-204ENST00000424089 CSRNP3Q8WYN3 585 aa15.92■□□□□ 0.14
POLR1A-204ENST00000424089 KIF27Q86VH2 1401 aa15.92■□□□□ 0.14
POLR1A-204ENST00000424089 ADGRL1O94910 1474 aa15.91■□□□□ 0.14
POLR1A-204ENST00000424089 CARMIL2Q6F5E8 1435 aa15.91■□□□□ 0.14
POLR1A-204ENST00000424089 IGF1RP08069 1367 aa15.89■□□□□ 0.13
POLR1A-204ENST00000424089 TTBK1Q5TCY1 1321 aaPredicted RBP15.89■□□□□ 0.13
POLR1A-204ENST00000424089 ABCC2Q92887 1545 aa15.89■□□□□ 0.13
POLR1A-204ENST00000424089 PLB1Q6P1J6 1458 aa15.88■□□□□ 0.13
POLR1A-204ENST00000424089 TNIKQ9UKE5 1360 aa15.87■□□□□ 0.13
POLR1A-204ENST00000424089 GLI2P10070 1586 aa15.87■□□□□ 0.13
POLR1A-204ENST00000424089 HECW2Q9P2P5 1572 aa15.87■□□□□ 0.13
POLR1A-204ENST00000424089 ASXL2Q76L83 1435 aa15.85■□□□□ 0.13
POLR1A-204ENST00000424089 PPRC1Q5VV67 1664 aaKnown RBP15.85■□□□□ 0.13
POLR1A-204ENST00000424089 IQGAP2Q13576 1575 aa15.83■□□□□ 0.13
POLR1A-204ENST00000424089 FBXO41Q8TF61 875 aa15.82■□□□□ 0.12
POLR1A-204ENST00000424089 CARMIL1Q5VZK9 1371 aa15.82■□□□□ 0.12
POLR1A-204ENST00000424089 UHRF1BP1LA0JNW5 1464 aa15.82■□□□□ 0.12
POLR1A-204ENST00000424089 TEX14Q8IWB6 1497 aa15.8■□□□□ 0.12
POLR1A-204ENST00000424089 TRIM26Q12899 539 aaPredicted RBP15.8■□□□□ 0.12
POLR1A-204ENST00000424089 GOLGA3Q08378 1498 aa15.79■□□□□ 0.12
POLR1A-204ENST00000424089 UACAQ9BZF9 1416 aa15.79■□□□□ 0.12
POLR1A-204ENST00000424089 MAP3K4Q9Y6R4 1608 aa15.77■□□□□ 0.12
POLR1A-204ENST00000424089 PCGF6Q9BYE7 350 aa15.76■□□□□ 0.11
POLR1A-204ENST00000424089 EPRSP07814 1512 aaKnown RBP15.75■□□□□ 0.11
POLR1A-204ENST00000424089 KIF21BO75037 1637 aa15.74■□□□□ 0.11
POLR1A-204ENST00000424089 KDM5BQ9UGL1 1544 aa15.73■□□□□ 0.11
POLR1A-204ENST00000424089 ZCCHC11Q5TAX3 1644 aaKnown RBP15.73■□□□□ 0.11
POLR1A-204ENST00000424089 DISP1Q96F81 1524 aa15.72■□□□□ 0.11
POLR1A-204ENST00000424089 EHMT2Q96KQ7 1210 aa15.71■□□□□ 0.11
POLR1A-204ENST00000424089 COL17A1Q9UMD9 1497 aaPredicted RBP15.71■□□□□ 0.1
POLR1A-204ENST00000424089 UBTFP17480 764 aaKnown RBP15.7■□□□□ 0.1
POLR1A-204ENST00000424089 CEP162Q5TB80 1403 aa15.69■□□□□ 0.1
POLR1A-204ENST00000424089 UGGT2Q9NYU1 1516 aa15.68■□□□□ 0.1
POLR1A-204ENST00000424089 KIAA0556O60303 1618 aa15.68■□□□□ 0.1
POLR1A-204ENST00000424089 WDR7Q9Y4E6 1490 aa15.66■□□□□ 0.1
POLR1A-204ENST00000424089 RAPGEF2Q9Y4G8 1499 aa15.66■□□□□ 0.1
POLR1A-204ENST00000424089 CFAP43Q8NDM7 1665 aa15.64■□□□□ 0.09
POLR1A-204ENST00000424089 PRXQ9BXM0 1461 aa15.62■□□□□ 0.09
POLR1A-204ENST00000424089 CTTNBP2Q8WZ74 1663 aa15.6■□□□□ 0.09
POLR1A-204ENST00000424089 CD109Q6YHK3 1445 aa15.6■□□□□ 0.09
POLR1A-204ENST00000424089 MAGI3Q5TCQ9 1506 aa15.6■□□□□ 0.09
POLR1A-204ENST00000424089 HRCP23327 699 aa15.6■□□□□ 0.09
POLR1A-204ENST00000424089 LMTK3Q96Q04 1460 aa15.59■□□□□ 0.09
POLR1A-204ENST00000424089 KCNH8Q96L42 1107 aa15.56■□□□□ 0.08
POLR1A-204ENST00000424089 CLIP1P30622 1438 aa15.53■□□□□ 0.08
POLR1A-204ENST00000424089 ABCA8O94911 1581 aa15.53■□□□□ 0.08
POLR1A-204ENST00000424089 ARAP3Q8WWN8 1544 aa15.48■□□□□ 0.07
POLR1A-204ENST00000424089 PHLDB1Q86UU1 1377 aa15.46■□□□□ 0.07
POLR1A-204ENST00000424089 VPS8Q8N3P4 1428 aa15.45■□□□□ 0.06
POLR1A-204ENST00000424089 SOCS7O14512 581 aa15.44■□□□□ 0.06
POLR1A-204ENST00000424089 PTPRMP28827 1452 aa15.44■□□□□ 0.06
POLR1A-204ENST00000424089 DISP3Q9P2K9 1392 aa15.43■□□□□ 0.06
POLR1A-204ENST00000424089 ADAMTSL3P82987 1691 aa15.43■□□□□ 0.06
POLR1A-204ENST00000424089 ABCA9Q8IUA7 1624 aa15.43■□□□□ 0.06
POLR1A-204ENST00000424089 ZEB1P37275 1124 aaPredicted RBP15.42■□□□□ 0.06
POLR1A-204ENST00000424089 ILDR2Q71H61 639 aa15.41■□□□□ 0.06
POLR1A-204ENST00000424089 ARID4BQ4LE39 1312 aaPredicted RBP15.41■□□□□ 0.06
POLR1A-204ENST00000424089 ARID3CA6NKF2 412 aa15.39■□□□□ 0.05
POLR1A-204ENST00000424089 BCORL1Q5H9F3 1711 aa15.39■□□□□ 0.05
POLR1A-204ENST00000424089 ATP10BO94823 1461 aa15.39■□□□□ 0.05
POLR1A-204ENST00000424089 NEO1Q92859 1461 aa15.39■□□□□ 0.05
POLR1A-204ENST00000424089 APLP2Q06481 763 aa15.38■□□□□ 0.05
POLR1A-204ENST00000424089 CERKQ8TCT0 537 aa15.38■□□□□ 0.05
POLR1A-204ENST00000424089 PCF11O94913 1555 aaKnown RBP15.37■□□□□ 0.05
POLR1A-204ENST00000424089 PLPPR3Q6T4P5 718 aa15.36■□□□□ 0.05
POLR1A-204ENST00000424089 MADDQ8WXG6 1647 aa15.35■□□□□ 0.05
POLR1A-204ENST00000424089 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.35■□□□□ 0.05
POLR1A-204ENST00000424089 RAPGEF3O95398 923 aa15.35■□□□□ 0.05
POLR1A-204ENST00000424089 HSPA2P54652 639 aa15.35■□□□□ 0.05
POLR1A-204ENST00000424089 HNRNPUL2Q1KMD3 747 aaKnown RBP15.35■□□□□ 0.05
POLR1A-204ENST00000424089 P3H3Q8IVL6 736 aa15.35■□□□□ 0.05
POLR1A-204ENST00000424089 RAPGEF6Q8TEU7 1601 aa15.35■□□□□ 0.05
POLR1A-204ENST00000424089 PPARGC1BQ86YN6 1023 aaKnown RBP15.33■□□□□ 0.04
POLR1A-204ENST00000424089 RIMS1Q86UR5 1692 aaKnown RBP15.32■□□□□ 0.04
POLR1A-204ENST00000424089 FRMPD1Q5SYB0 1578 aa15.31■□□□□ 0.04
POLR1A-204ENST00000424089 SAMD9Q5K651 1589 aa15.3■□□□□ 0.04
POLR1A-204ENST00000424089 ARHGEF40Q8TER5 1519 aa15.3■□□□□ 0.04
POLR1A-204ENST00000424089 CFAP74Q9C0B2 1584 aa15.29■□□□□ 0.04
POLR1A-204ENST00000424089 POGZQ7Z3K3 1410 aa15.28■□□□□ 0.04
POLR1A-204ENST00000424089 DENND4BO75064 1496 aaPredicted RBP15.27■□□□□ 0.04
POLR1A-204ENST00000424089 RICTORQ6R327 1708 aa15.26■□□□□ 0.03
POLR1A-204ENST00000424089 FANCAO15360 1455 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms