RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 PBRM1Q86U86 1689 aa13.73□□□□□ -0.21
SNX20-203ENST00000423026 EFCAB5A4FU69 1503 aa13.72□□□□□ -0.21
SNX20-203ENST00000423026 FHAD1B1AJZ9 1412 aa13.71□□□□□ -0.21
SNX20-203ENST00000423026 AQRO60306 1485 aaKnown RBP eCLIP13.71□□□□□ -0.22
SNX20-203ENST00000423026 MYT1Q01538 1121 aa13.71□□□□□ -0.22
SNX20-203ENST00000423026 GRIN2BQ13224 1484 aa13.7□□□□□ -0.22
SNX20-203ENST00000423026 P3H3Q8IVL6 736 aa13.68□□□□□ -0.22
SNX20-203ENST00000423026 THOC2Q8NI27 1593 aaKnown RBP13.67□□□□□ -0.22
SNX20-203ENST00000423026 MAP3K1Q13233 1512 aa13.66□□□□□ -0.22
SNX20-203ENST00000423026 KANK4Q5T7N3 995 aaPredicted RBP13.66□□□□□ -0.22
SNX20-203ENST00000423026 ADAMTS12P58397 1594 aa13.65□□□□□ -0.22
SNX20-203ENST00000423026 CCER1Q8TC90 406 aaPredicted RBP13.65□□□□□ -0.22
SNX20-203ENST00000423026 ZNF608Q9ULD9 1512 aaPredicted RBP13.64□□□□□ -0.23
SNX20-203ENST00000423026 FHOD3Q2V2M9 1422 aa13.64□□□□□ -0.23
SNX20-203ENST00000423026 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.64□□□□□ -0.23
SNX20-203ENST00000423026 TIAM1Q13009 1591 aa13.62□□□□□ -0.23
SNX20-203ENST00000423026 FMN1Q68DA7 1419 aa13.62□□□□□ -0.23
SNX20-203ENST00000423026 HNRNPUL2Q1KMD3 747 aaKnown RBP13.61□□□□□ -0.23
SNX20-203ENST00000423026 ATP1B4Q9UN42 357 aaPredicted RBP13.61□□□□□ -0.23
SNX20-203ENST00000423026 EIF4G3O43432 1585 aaKnown RBP13.6□□□□□ -0.23
SNX20-203ENST00000423026 PCF11O94913 1555 aaKnown RBP13.6□□□□□ -0.23
SNX20-203ENST00000423026 SAMD9Q5K651 1589 aa13.6□□□□□ -0.23
SNX20-203ENST00000423026 FYCO1Q9BQS8 1478 aa13.6□□□□□ -0.23
SNX20-203ENST00000423026 CASKIN1Q8WXD9 1431 aa13.6□□□□□ -0.23
SNX20-203ENST00000423026 SNAPC4Q5SXM2 1469 aa13.58□□□□□ -0.24
SNX20-203ENST00000423026 IQGAP2Q13576 1575 aa13.57□□□□□ -0.24
SNX20-203ENST00000423026 CFAP43Q8NDM7 1665 aa13.57□□□□□ -0.24
SNX20-203ENST00000423026 LRRC9Q6ZRR7 1453 aa13.56□□□□□ -0.24
SNX20-203ENST00000423026 RRBP1Q9P2E9 1410 aaKnown RBP13.55□□□□□ -0.24
SNX20-203ENST00000423026 MAGI1Q96QZ7 1491 aaPredicted RBP13.55□□□□□ -0.24
SNX20-203ENST00000423026 GRIN2AQ12879 1464 aa13.52□□□□□ -0.24
SNX20-203ENST00000423026 CCNB3Q8WWL7 1395 aa13.52□□□□□ -0.24
SNX20-203ENST00000423026 CHMP7Q8WUX9 453 aaPredicted RBP13.52□□□□□ -0.25
SNX20-203ENST00000423026 KIAA0586Q9BVV6 1533 aa13.51□□□□□ -0.25
SNX20-203ENST00000423026 SYNJ2O15056 1496 aa13.5□□□□□ -0.25
SNX20-203ENST00000423026 UGGT2Q9NYU1 1516 aa13.5□□□□□ -0.25
SNX20-203ENST00000423026 FBLN2P98095 1184 aa13.47□□□□□ -0.25
SNX20-203ENST00000423026 MTUS2Q5JR59 1369 aa13.46□□□□□ -0.25
SNX20-203ENST00000423026 CCDC18Q5T9S5 1454 aa13.44□□□□□ -0.26
SNX20-203ENST00000423026 PHLDB1Q86UU1 1377 aa13.44□□□□□ -0.26
SNX20-203ENST00000423026 HECW1Q76N89 1606 aa13.44□□□□□ -0.26
SNX20-203ENST00000423026 LRRIQ1Q96JM4 1722 aa13.43□□□□□ -0.26
SNX20-203ENST00000423026 ITGAEP38570 1179 aa13.42□□□□□ -0.26
SNX20-203ENST00000423026 KIAA0556O60303 1618 aa13.42□□□□□ -0.26
SNX20-203ENST00000423026 CEP170Q5SW79 1584 aa13.41□□□□□ -0.26
SNX20-203ENST00000423026 FAM50AQ14320 339 aaKnown RBP13.41□□□□□ -0.26
SNX20-203ENST00000423026 DISP1Q96F81 1524 aa13.4□□□□□ -0.26
SNX20-203ENST00000423026 NUP160Q12769 1436 aa13.4□□□□□ -0.26
SNX20-203ENST00000423026 EHBP1L1Q8N3D4 1523 aa13.39□□□□□ -0.27
SNX20-203ENST00000423026 SUPT6HQ7KZ85 1726 aaKnown RBP13.39□□□□□ -0.27
SNX20-203ENST00000423026 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.38□□□□□ -0.27
SNX20-203ENST00000423026 CARMIL2Q6F5E8 1435 aa13.37□□□□□ -0.27
SNX20-203ENST00000423026 EPRSP07814 1512 aaKnown RBP13.37□□□□□ -0.27
SNX20-203ENST00000423026 SCAF1Q9H7N4 1312 aaKnown RBP13.37□□□□□ -0.27
SNX20-203ENST00000423026 JPH4Q96JJ6 628 aa13.37□□□□□ -0.27
SNX20-203ENST00000423026 CLSPNQ9HAW4 1339 aa13.36□□□□□ -0.27
SNX20-203ENST00000423026 NCOA2Q15596 1464 aa13.35□□□□□ -0.27
SNX20-203ENST00000423026 FGD6Q6ZV73 1430 aa13.35□□□□□ -0.27
SNX20-203ENST00000423026 RAPGEF6Q8TEU7 1601 aa13.33□□□□□ -0.27
SNX20-203ENST00000423026 DHX57Q6P158 1386 aaKnown RBP13.32□□□□□ -0.28
SNX20-203ENST00000423026 MYOM3Q5VTT5 1437 aa13.32□□□□□ -0.28
SNX20-203ENST00000423026 CDK13Q14004 1512 aaKnown RBP13.32□□□□□ -0.28
SNX20-203ENST00000423026 CDK11AQ9UQ88 783 aaPredicted RBP13.31□□□□□ -0.28
SNX20-203ENST00000423026 SETD5Q9C0A6 1442 aa13.31□□□□□ -0.28
SNX20-203ENST00000423026 MAGI3Q5TCQ9 1506 aa13.31□□□□□ -0.28
SNX20-203ENST00000423026 RAB3GAP2Q9H2M9 1393 aa13.3□□□□□ -0.28
SNX20-203ENST00000423026 ARID3CA6NKF2 412 aa13.3□□□□□ -0.28
SNX20-203ENST00000423026 ARHGEF11O15085 1522 aa13.29□□□□□ -0.28
SNX20-203ENST00000423026 NUP153P49790 1475 aaKnown RBP13.29□□□□□ -0.28
SNX20-203ENST00000423026 CHD1O14646 1710 aa13.28□□□□□ -0.28
SNX20-203ENST00000423026 PTPN23Q9H3S7 1636 aa13.26□□□□□ -0.29
SNX20-203ENST00000423026 PLB1Q6P1J6 1458 aa13.25□□□□□ -0.29
SNX20-203ENST00000423026 PRG4Q92954 1404 aaPredicted RBP13.24□□□□□ -0.29
SNX20-203ENST00000423026 MIA2Q96PC5 1412 aa13.24□□□□□ -0.29
SNX20-203ENST00000423026 TCOF1Q13428 1488 aaKnown RBP13.22□□□□□ -0.29
SNX20-203ENST00000423026 TROQ12816 1431 aaPredicted RBP13.21□□□□□ -0.3
SNX20-203ENST00000423026 ABCA8O94911 1581 aa13.2□□□□□ -0.3
SNX20-203ENST00000423026 PTPRGP23470 1445 aa13.2□□□□□ -0.3
SNX20-203ENST00000423026 HFM1A2PYH4 1435 aa13.18□□□□□ -0.3
SNX20-203ENST00000423026 PLEKHD1A6NEE1 506 aa13.18□□□□□ -0.3
SNX20-203ENST00000423026 ZNF316A6NFI3 1004 aaPredicted RBP13.18□□□□□ -0.3
SNX20-203ENST00000423026 PTPRKQ15262 1439 aa13.18□□□□□ -0.3
SNX20-203ENST00000423026 SHROOM2Q13796 1616 aa13.17□□□□□ -0.3
SNX20-203ENST00000423026 ADCY10Q96PN6 1610 aa13.15□□□□□ -0.3
SNX20-203ENST00000423026 ITSN2Q9NZM3 1697 aa13.15□□□□□ -0.31
SNX20-203ENST00000423026 ATP10BO94823 1461 aa13.14□□□□□ -0.31
SNX20-203ENST00000423026 NAIPQ13075 1403 aa13.14□□□□□ -0.31
SNX20-203ENST00000423026 MAPKBP1O60336 1514 aa13.13□□□□□ -0.31
SNX20-203ENST00000423026 CHIC2Q9UKJ5 165 aa13.13□□□□□ -0.31
SNX20-203ENST00000423026 ACIN1Q9UKV3 1341 aaKnown RBP13.12□□□□□ -0.31
SNX20-203ENST00000423026 DIEXFQ68CQ4 756 aaKnown RBP13.12□□□□□ -0.31
SNX20-203ENST00000423026 CFDP1Q9UEE9 299 aaPredicted RBP13.12□□□□□ -0.31
SNX20-203ENST00000423026 AKNAQ7Z591 1439 aa13.12□□□□□ -0.31
SNX20-203ENST00000423026 UACAQ9BZF9 1416 aa13.11□□□□□ -0.31
SNX20-203ENST00000423026 KIF14Q15058 1648 aa13.11□□□□□ -0.31
SNX20-203ENST00000423026 RRP7BPQ9NSQ0 103 aa13.11□□□□□ -0.31
SNX20-203ENST00000423026 GCC2Q8IWJ2 1684 aa13.1□□□□□ -0.31
SNX20-203ENST00000423026 CLASP1Q7Z460 1538 aa13.1□□□□□ -0.31
SNX20-203ENST00000423026 GPATCH8Q9UKJ3 1502 aaKnown RBP13.1□□□□□ -0.31
SNX20-203ENST00000423026 DAPK1P53355 1430 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms