RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 TARBP1Q13395 1621 aaKnown RBP20.74■□□□□ 0.91
CDCA3-202ENST00000422785 RRBP1Q9P2E9 1410 aaKnown RBP20.74■□□□□ 0.91
CDCA3-202ENST00000422785 TIAM1Q13009 1591 aa20.73■□□□□ 0.91
CDCA3-202ENST00000422785 MRC2Q9UBG0 1479 aa20.69■□□□□ 0.9
CDCA3-202ENST00000422785 PCF11O94913 1555 aaKnown RBP20.65■□□□□ 0.9
CDCA3-202ENST00000422785 FHOD3Q2V2M9 1422 aa20.65■□□□□ 0.9
CDCA3-202ENST00000422785 P3H3Q8IVL6 736 aa20.64■□□□□ 0.89
CDCA3-202ENST00000422785 LRRC9Q6ZRR7 1453 aa20.64■□□□□ 0.89
CDCA3-202ENST00000422785 CCNB3Q8WWL7 1395 aa20.63■□□□□ 0.89
CDCA3-202ENST00000422785 CFAP43Q8NDM7 1665 aa20.63■□□□□ 0.89
CDCA3-202ENST00000422785 AQRO60306 1485 aaKnown RBP eCLIP20.63■□□□□ 0.897e-7■■■■□ 22.9
CDCA3-202ENST00000422785 FYCO1Q9BQS8 1478 aa20.62■□□□□ 0.89
CDCA3-202ENST00000422785 CASKIN1Q8WXD9 1431 aa20.6■□□□□ 0.89
CDCA3-202ENST00000422785 PBRM1Q86U86 1689 aa20.59■□□□□ 0.89
CDCA3-202ENST00000422785 SAMD9Q5K651 1589 aa20.58■□□□□ 0.88
CDCA3-202ENST00000422785 FMN1Q68DA7 1419 aa20.58■□□□□ 0.88
CDCA3-202ENST00000422785 WDR62O43379 1518 aa20.56■□□□□ 0.88
CDCA3-202ENST00000422785 IFT140Q96RY7 1462 aa20.53■□□□□ 0.88
CDCA3-202ENST00000422785 CLSPNQ9HAW4 1339 aa20.51■□□□□ 0.87
CDCA3-202ENST00000422785 GRIN2BQ13224 1484 aa20.51■□□□□ 0.87
CDCA3-202ENST00000422785 SNAPC4Q5SXM2 1469 aa20.51■□□□□ 0.87
CDCA3-202ENST00000422785 ADAMTS12P58397 1594 aa20.51■□□□□ 0.87
CDCA3-202ENST00000422785 ATP1B4Q9UN42 357 aaPredicted RBP20.5■□□□□ 0.87
CDCA3-202ENST00000422785 PHLDB1Q86UU1 1377 aa20.5■□□□□ 0.87
CDCA3-202ENST00000422785 DHX57Q6P158 1386 aaKnown RBP20.48■□□□□ 0.87
CDCA3-202ENST00000422785 ZNF608Q9ULD9 1512 aaPredicted RBP20.43■□□□□ 0.86
CDCA3-202ENST00000422785 IQGAP2Q13576 1575 aa20.42■□□□□ 0.86
CDCA3-202ENST00000422785 THOC2Q8NI27 1593 aaKnown RBP20.42■□□□□ 0.86
CDCA3-202ENST00000422785 ERCC6Q03468 1493 aa20.41■□□□□ 0.86
CDCA3-202ENST00000422785 ITGAEP38570 1179 aa20.4■□□□□ 0.86
CDCA3-202ENST00000422785 ZNF316A6NFI3 1004 aaPredicted RBP20.39■□□□□ 0.85
CDCA3-202ENST00000422785 LRRIQ1Q96JM4 1722 aa20.38■□□□□ 0.85
CDCA3-202ENST00000422785 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.37■□□□□ 0.85
CDCA3-202ENST00000422785 DIEXFQ68CQ4 756 aaKnown RBP20.37■□□□□ 0.85
CDCA3-202ENST00000422785 FAM50AQ14320 339 aaKnown RBP20.35■□□□□ 0.85
CDCA3-202ENST00000422785 EIF4G3O43432 1585 aaKnown RBP20.35■□□□□ 0.85
CDCA3-202ENST00000422785 MTUS2Q5JR59 1369 aa20.34■□□□□ 0.85
CDCA3-202ENST00000422785 RAB3GAP2Q9H2M9 1393 aa20.34■□□□□ 0.85
CDCA3-202ENST00000422785 SETD5Q9C0A6 1442 aa20.33■□□□□ 0.84
CDCA3-202ENST00000422785 UGGT2Q9NYU1 1516 aa20.32■□□□□ 0.84
CDCA3-202ENST00000422785 CCDC18Q5T9S5 1454 aa20.3■□□□□ 0.84
CDCA3-202ENST00000422785 FGD6Q6ZV73 1430 aa20.3■□□□□ 0.84
CDCA3-202ENST00000422785 EHBP1L1Q8N3D4 1523 aa20.29■□□□□ 0.84
CDCA3-202ENST00000422785 KIAA0586Q9BVV6 1533 aa20.29■□□□□ 0.84
CDCA3-202ENST00000422785 HECW1Q76N89 1606 aa20.28■□□□□ 0.84
CDCA3-202ENST00000422785 GRIN2AQ12879 1464 aa20.28■□□□□ 0.84
CDCA3-202ENST00000422785 SUPT6HQ7KZ85 1726 aaKnown RBP20.26■□□□□ 0.83
CDCA3-202ENST00000422785 NCOA2Q15596 1464 aa20.26■□□□□ 0.83
CDCA3-202ENST00000422785 MAGI1Q96QZ7 1491 aaPredicted RBP20.26■□□□□ 0.83
CDCA3-202ENST00000422785 MYOM3Q5VTT5 1437 aa20.23■□□□□ 0.83
CDCA3-202ENST00000422785 ARHGEF11O15085 1522 aa20.22■□□□□ 0.83
CDCA3-202ENST00000422785 EPRSP07814 1512 aaKnown RBP20.21■□□□□ 0.83
CDCA3-202ENST00000422785 MAGI3Q5TCQ9 1506 aa20.21■□□□□ 0.83
CDCA3-202ENST00000422785 MAPKBP1O60336 1514 aa20.21■□□□□ 0.83
CDCA3-202ENST00000422785 KIAA0556O60303 1618 aa20.2■□□□□ 0.82
CDCA3-202ENST00000422785 DISP1Q96F81 1524 aa20.2■□□□□ 0.82
CDCA3-202ENST00000422785 SYNJ2O15056 1496 aa20.19■□□□□ 0.82
CDCA3-202ENST00000422785 CHMP7Q8WUX9 453 aaPredicted RBP20.15■□□□□ 0.82
CDCA3-202ENST00000422785 CDK13Q14004 1512 aaKnown RBP20.14■□□□□ 0.81
CDCA3-202ENST00000422785 PTPN23Q9H3S7 1636 aa20.13■□□□□ 0.81
CDCA3-202ENST00000422785 CEP170Q5SW79 1584 aa20.13■□□□□ 0.81
CDCA3-202ENST00000422785 PTPRKQ15262 1439 aa20.11■□□□□ 0.81
CDCA3-202ENST00000422785 HFM1A2PYH4 1435 aa20.11■□□□□ 0.81
CDCA3-202ENST00000422785 TCOF1Q13428 1488 aaKnown RBP20.1■□□□□ 0.81
CDCA3-202ENST00000422785 NUP160Q12769 1436 aa20.09■□□□□ 0.81
CDCA3-202ENST00000422785 RAPGEF6Q8TEU7 1601 aa20.08■□□□□ 0.8
CDCA3-202ENST00000422785 NUP153P49790 1475 aaKnown RBP20.07■□□□□ 0.8
CDCA3-202ENST00000422785 MIA2Q96PC5 1412 aa20.06■□□□□ 0.8
CDCA3-202ENST00000422785 FBLN2P98095 1184 aa20.05■□□□□ 0.8
CDCA3-202ENST00000422785 NAIPQ13075 1403 aa20.04■□□□□ 0.8
CDCA3-202ENST00000422785 PELP1Q8IZL8 1130 aaKnown RBP20.02■□□□□ 0.8
CDCA3-202ENST00000422785 ARID3CA6NKF2 412 aa20.01■□□□□ 0.79
CDCA3-202ENST00000422785 CARMIL2Q6F5E8 1435 aa20.01■□□□□ 0.79
CDCA3-202ENST00000422785 TIMELESSQ9UNS1 1208 aa20■□□□□ 0.79
CDCA3-202ENST00000422785 UACAQ9BZF9 1416 aa20■□□□□ 0.79
CDCA3-202ENST00000422785 JPH4Q96JJ6 628 aa20■□□□□ 0.79
CDCA3-202ENST00000422785 CDK11AQ9UQ88 783 aaPredicted RBP19.99■□□□□ 0.79
CDCA3-202ENST00000422785 SIN3AQ96ST3 1273 aa19.98■□□□□ 0.79
CDCA3-202ENST00000422785 AKNAQ7Z591 1439 aa19.97■□□□□ 0.79
CDCA3-202ENST00000422785 MIER1Q8N108 512 aa19.96■□□□□ 0.79
CDCA3-202ENST00000422785 GCC2Q8IWJ2 1684 aa19.95■□□□□ 0.78
CDCA3-202ENST00000422785 PLB1Q6P1J6 1458 aa19.95■□□□□ 0.78
CDCA3-202ENST00000422785 NEUROD1Q13562 356 aa19.95■□□□□ 0.78
CDCA3-202ENST00000422785 TROQ12816 1431 aaPredicted RBP19.92■□□□□ 0.78
CDCA3-202ENST00000422785 CENPBP07199 599 aaPredicted RBP19.92■□□□□ 0.78
CDCA3-202ENST00000422785 ACIN1Q9UKV3 1341 aaKnown RBP19.91■□□□□ 0.78
CDCA3-202ENST00000422785 RRP7BPQ9NSQ0 103 aa19.89■□□□□ 0.77
CDCA3-202ENST00000422785 CHIC2Q9UKJ5 165 aa19.89■□□□□ 0.77
CDCA3-202ENST00000422785 PRG4Q92954 1404 aaPredicted RBP19.88■□□□□ 0.77
CDCA3-202ENST00000422785 ADCY10Q96PN6 1610 aa19.87■□□□□ 0.77
CDCA3-202ENST00000422785 ABCA8O94911 1581 aa19.87■□□□□ 0.77
CDCA3-202ENST00000422785 DAPK1P53355 1430 aa19.86■□□□□ 0.77
CDCA3-202ENST00000422785 SCAF1Q9H7N4 1312 aaKnown RBP19.86■□□□□ 0.77
CDCA3-202ENST00000422785 DNMT1P26358 1616 aaKnown RBP19.86■□□□□ 0.77
CDCA3-202ENST00000422785 ROCK1Q13464 1354 aa19.85■□□□□ 0.77
CDCA3-202ENST00000422785 PPP1R15AO75807 674 aaPredicted RBP19.84■□□□□ 0.77
CDCA3-202ENST00000422785 ITSN2Q9NZM3 1697 aa19.83■□□□□ 0.77
CDCA3-202ENST00000422785 ABCC5O15440 1437 aa19.83■□□□□ 0.77
CDCA3-202ENST00000422785 KDM6BO15054 1643 aa19.82■□□□□ 0.76
CDCA3-202ENST00000422785 ZNF644Q9H582 1327 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms