RNA–Protein interactions for RNA: ENST00000422029.6

NDUFA3-208, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-208ENST00000422029 KIF27Q86VH2 1401 aa19.72■□□□□ 0.75
NDUFA3-208ENST00000422029 RUSC2Q8N2Y8 1516 aa19.7■□□□□ 0.74
NDUFA3-208ENST00000422029 CARMIL1Q5VZK9 1371 aa19.63■□□□□ 0.73
NDUFA3-208ENST00000422029 NPM1P06748 294 aaKnown RBP eCLIP19.62■□□□□ 0.73
NDUFA3-208ENST00000422029 KIAA0586Q9BVV6 1533 aa19.61■□□□□ 0.73
NDUFA3-208ENST00000422029 CUL7Q14999 1698 aa19.59■□□□□ 0.73
NDUFA3-208ENST00000422029 FAM69CQ0P6D2 419 aa19.59■□□□□ 0.73
NDUFA3-208ENST00000422029 AEBP2Q6ZN18 517 aaPredicted RBP19.58■□□□□ 0.72
NDUFA3-208ENST00000422029 KIF13AQ9H1H9 1805 aa19.55■□□□□ 0.72
NDUFA3-208ENST00000422029 ADCY10Q96PN6 1610 aa19.54■□□□□ 0.72
NDUFA3-208ENST00000422029 PTPRGP23470 1445 aa19.51■□□□□ 0.71
NDUFA3-208ENST00000422029 ABCC10Q5T3U5 1492 aa19.47■□□□□ 0.71
NDUFA3-208ENST00000422029 IQGAP2Q13576 1575 aa19.44■□□□□ 0.7
NDUFA3-208ENST00000422029 TNIKQ9UKE5 1360 aa19.44■□□□□ 0.7
NDUFA3-208ENST00000422029 CARMIL2Q6F5E8 1435 aa19.43■□□□□ 0.7
NDUFA3-208ENST00000422029 MAPKBP1O60336 1514 aa19.41■□□□□ 0.7
NDUFA3-208ENST00000422029 DIP2BQ9P265 1576 aa19.41■□□□□ 0.7
NDUFA3-208ENST00000422029 TSPOAP1O95153 1857 aa19.41■□□□□ 0.7
NDUFA3-208ENST00000422029 RAPGEF2Q9Y4G8 1499 aa19.41■□□□□ 0.7
NDUFA3-208ENST00000422029 DISP1Q96F81 1524 aa19.38■□□□□ 0.69
NDUFA3-208ENST00000422029 ASXL2Q76L83 1435 aa19.33■□□□□ 0.68
NDUFA3-208ENST00000422029 UACAQ9BZF9 1416 aa19.33■□□□□ 0.68
NDUFA3-208ENST00000422029 ABCC2Q92887 1545 aa19.32■□□□□ 0.68
NDUFA3-208ENST00000422029 UGGT2Q9NYU1 1516 aa19.29■□□□□ 0.68
NDUFA3-208ENST00000422029 P3H3Q8IVL6 736 aa19.28■□□□□ 0.68
NDUFA3-208ENST00000422029 KDM6BO15054 1643 aa19.27■□□□□ 0.68
NDUFA3-208ENST00000422029 ARID3CA6NKF2 412 aa19.27■□□□□ 0.68
NDUFA3-208ENST00000422029 KIAA0556O60303 1618 aa19.26■□□□□ 0.67
NDUFA3-208ENST00000422029 UHRF1BP1LA0JNW5 1464 aa19.24■□□□□ 0.67
NDUFA3-208ENST00000422029 PLB1Q6P1J6 1458 aa19.23■□□□□ 0.67
NDUFA3-208ENST00000422029 RANGAP1P46060 587 aaPredicted RBP19.23■□□□□ 0.67
NDUFA3-208ENST00000422029 FAM9AQ8IZU1 332 aaPredicted RBP19.23■□□□□ 0.67
NDUFA3-208ENST00000422029 KCNH8Q96L42 1107 aa19.21■□□□□ 0.67
NDUFA3-208ENST00000422029 CTTNBP2Q8WZ74 1663 aa19.2■□□□□ 0.66
NDUFA3-208ENST00000422029 ZCCHC11Q5TAX3 1644 aaKnown RBP19.2■□□□□ 0.66
NDUFA3-208ENST00000422029 KDM4FA0A1W2PPD8 638 aa19.19■□□□□ 0.66
NDUFA3-208ENST00000422029 PRXQ9BXM0 1461 aa19.19■□□□□ 0.66
NDUFA3-208ENST00000422029 KDM5BQ9UGL1 1544 aa19.19■□□□□ 0.66
NDUFA3-208ENST00000422029 EPRSP07814 1512 aaKnown RBP19.17■□□□□ 0.66
NDUFA3-208ENST00000422029 PPRC1Q5VV67 1664 aaKnown RBP19.17■□□□□ 0.66
NDUFA3-208ENST00000422029 CSRNP3Q8WYN3 585 aa19.16■□□□□ 0.66
NDUFA3-208ENST00000422029 EHMT2Q96KQ7 1210 aa19.15■□□□□ 0.66
NDUFA3-208ENST00000422029 GLI2P10070 1586 aa19.15■□□□□ 0.66
NDUFA3-208ENST00000422029 COL17A1Q9UMD9 1497 aaPredicted RBP19.14■□□□□ 0.65
NDUFA3-208ENST00000422029 GOLGA3Q08378 1498 aa19.12■□□□□ 0.65
NDUFA3-208ENST00000422029 ABCA8O94911 1581 aa19.09■□□□□ 0.65
NDUFA3-208ENST00000422029 WDR7Q9Y4E6 1490 aa19.09■□□□□ 0.65
NDUFA3-208ENST00000422029 MAP3K4Q9Y6R4 1608 aa19.08■□□□□ 0.65
NDUFA3-208ENST00000422029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.03■□□□□ 0.64
NDUFA3-208ENST00000422029 HNRNPUL2Q1KMD3 747 aaKnown RBP19.03■□□□□ 0.64
NDUFA3-208ENST00000422029 CD109Q6YHK3 1445 aa19.02■□□□□ 0.64
NDUFA3-208ENST00000422029 TEX14Q8IWB6 1497 aa19.01■□□□□ 0.63
NDUFA3-208ENST00000422029 ATP10BO94823 1461 aa18.99■□□□□ 0.63
NDUFA3-208ENST00000422029 ADGRL1O94910 1474 aa18.97■□□□□ 0.63
NDUFA3-208ENST00000422029 FHOD3Q2V2M9 1422 aa18.96■□□□□ 0.63
NDUFA3-208ENST00000422029 SAMD9Q5K651 1589 aa18.93■□□□□ 0.62
NDUFA3-208ENST00000422029 CFAP43Q8NDM7 1665 aa18.92■□□□□ 0.62
NDUFA3-208ENST00000422029 MAGI3Q5TCQ9 1506 aa18.91■□□□□ 0.62
NDUFA3-208ENST00000422029 EEA1Q15075 1411 aa18.9■□□□□ 0.62
NDUFA3-208ENST00000422029 RAPGEF6Q8TEU7 1601 aa18.89■□□□□ 0.62
NDUFA3-208ENST00000422029 UBTFP17480 764 aaKnown RBP18.88■□□□□ 0.61
NDUFA3-208ENST00000422029 CHIC1Q5VXU3 224 aa18.88■□□□□ 0.61
NDUFA3-208ENST00000422029 ATP1B4Q9UN42 357 aaPredicted RBP18.87■□□□□ 0.61
NDUFA3-208ENST00000422029 RAPGEF3O95398 923 aa18.86■□□□□ 0.61
NDUFA3-208ENST00000422029 NUP153P49790 1475 aaKnown RBP18.85■□□□□ 0.61
NDUFA3-208ENST00000422029 PLEKHD1A6NEE1 506 aa18.82■□□□□ 0.6
NDUFA3-208ENST00000422029 KIF21BO75037 1637 aa18.79■□□□□ 0.6
NDUFA3-208ENST00000422029 ABCA9Q8IUA7 1624 aa18.79■□□□□ 0.6
NDUFA3-208ENST00000422029 ARAP3Q8WWN8 1544 aa18.76■□□□□ 0.59
NDUFA3-208ENST00000422029 CDK13Q14004 1512 aaKnown RBP18.75■□□□□ 0.59
NDUFA3-208ENST00000422029 ARID4BQ4LE39 1312 aaPredicted RBP18.73■□□□□ 0.59
NDUFA3-208ENST00000422029 EFCAB5A4FU69 1503 aa18.71■□□□□ 0.59
NDUFA3-208ENST00000422029 HECW2Q9P2P5 1572 aa18.69■□□□□ 0.58
NDUFA3-208ENST00000422029 PLPPR3Q6T4P5 718 aa18.69■□□□□ 0.58
NDUFA3-208ENST00000422029 NEO1Q92859 1461 aa18.68■□□□□ 0.58
NDUFA3-208ENST00000422029 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.68■□□□□ 0.58
NDUFA3-208ENST00000422029 ARHGAP35Q9NRY4 1499 aa18.67■□□□□ 0.58
NDUFA3-208ENST00000422029 FRMPD1Q5SYB0 1578 aa18.67■□□□□ 0.58
NDUFA3-208ENST00000422029 PHLDB1Q86UU1 1377 aa18.67■□□□□ 0.58
NDUFA3-208ENST00000422029 TTC37Q6PGP7 1564 aa18.66■□□□□ 0.58
NDUFA3-208ENST00000422029 AKNAQ7Z591 1439 aa18.66■□□□□ 0.58
NDUFA3-208ENST00000422029 FANCAO15360 1455 aa18.65■□□□□ 0.58
NDUFA3-208ENST00000422029 ILDR1Q86SU0 546 aaPredicted RBP18.63■□□□□ 0.57
NDUFA3-208ENST00000422029 DENND4BO75064 1496 aaPredicted RBP18.62■□□□□ 0.57
NDUFA3-208ENST00000422029 MLECQ14165 292 aa18.61■□□□□ 0.57
NDUFA3-208ENST00000422029 FMN1Q68DA7 1419 aa18.58■□□□□ 0.57
NDUFA3-208ENST00000422029 PTPRMP28827 1452 aa18.58■□□□□ 0.56
NDUFA3-208ENST00000422029 YEATS2Q9ULM3 1422 aa18.57■□□□□ 0.56
NDUFA3-208ENST00000422029 RICTORQ6R327 1708 aa18.57■□□□□ 0.56
NDUFA3-208ENST00000422029 HECW1Q76N89 1606 aa18.56■□□□□ 0.56
NDUFA3-208ENST00000422029 ADAMTSL3P82987 1691 aa18.56■□□□□ 0.56
NDUFA3-208ENST00000422029 SCAPERQ9BY12 1400 aa18.56■□□□□ 0.56
NDUFA3-208ENST00000422029 KIF14Q15058 1648 aa18.55■□□□□ 0.56
NDUFA3-208ENST00000422029 PLCH2O75038 1416 aa18.55■□□□□ 0.56
NDUFA3-208ENST00000422029 MADDQ8WXG6 1647 aa18.54■□□□□ 0.56
NDUFA3-208ENST00000422029 CDK11AQ9UQ88 783 aaPredicted RBP18.54■□□□□ 0.56
NDUFA3-208ENST00000422029 BCORL1Q5H9F3 1711 aa18.53■□□□□ 0.56
NDUFA3-208ENST00000422029 EFCAB2Q5VUJ9 269 aa18.53■□□□□ 0.56
NDUFA3-208ENST00000422029 MYT1LQ9UL68 1186 aa18.53■□□□□ 0.56
NDUFA3-208ENST00000422029 LRRIQ1Q96JM4 1722 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms