RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 MAPKBP1O60336 1514 aa22.63■■□□□ 1.21
UFD1-203ENST00000421968 ABCA5Q8WWZ7 1642 aa22.6■■□□□ 1.21
UFD1-203ENST00000421968 PRG4Q92954 1404 aaPredicted RBP22.59■■□□□ 1.21
UFD1-203ENST00000421968 ABCA10Q8WWZ4 1543 aa22.54■■□□□ 1.2
UFD1-203ENST00000421968 ADAMTS12P58397 1594 aa22.52■■□□□ 1.2
UFD1-203ENST00000421968 LMTK3Q96Q04 1460 aa22.5■■□□□ 1.19
UFD1-203ENST00000421968 JPH4Q96JJ6 628 aa22.49■■□□□ 1.19
UFD1-203ENST00000421968 ADCY10Q96PN6 1610 aa22.46■■□□□ 1.19
UFD1-203ENST00000421968 FHAD1B1AJZ9 1412 aa22.44■■□□□ 1.18
UFD1-203ENST00000421968 SOCS7O14512 581 aa22.32■■□□□ 1.16
UFD1-203ENST00000421968 PPRC1Q5VV67 1664 aaKnown RBP22.29■■□□□ 1.16
UFD1-203ENST00000421968 COL17A1Q9UMD9 1497 aaPredicted RBP22.28■■□□□ 1.16
UFD1-203ENST00000421968 WRNQ14191 1432 aaPredicted RBP eCLIP22.25■■□□□ 1.15
UFD1-203ENST00000421968 ILDR2Q71H61 639 aa22.24■■□□□ 1.15
UFD1-203ENST00000421968 ERICH3Q5RHP9 1530 aa22.23■■□□□ 1.15
UFD1-203ENST00000421968 RUSC2Q8N2Y8 1516 aa22.23■■□□□ 1.15
UFD1-203ENST00000421968 TOP2BQ02880 1626 aa22.23■■□□□ 1.15
UFD1-203ENST00000421968 GLI2P10070 1586 aa22.2■■□□□ 1.14
UFD1-203ENST00000421968 ASXL2Q76L83 1435 aa22.16■■□□□ 1.14
UFD1-203ENST00000421968 DISP3Q9P2K9 1392 aa22.16■■□□□ 1.14
UFD1-203ENST00000421968 PLB1Q6P1J6 1458 aa22.15■■□□□ 1.14
UFD1-203ENST00000421968 TTBK1Q5TCY1 1321 aaPredicted RBP22.12■■□□□ 1.13
UFD1-203ENST00000421968 ABCC2Q92887 1545 aa22.1■■□□□ 1.13
UFD1-203ENST00000421968 TEX14Q8IWB6 1497 aa22.09■■□□□ 1.13
UFD1-203ENST00000421968 PTPRGP23470 1445 aa22.09■■□□□ 1.13
UFD1-203ENST00000421968 MAP3K4Q9Y6R4 1608 aa22.03■■□□□ 1.12
UFD1-203ENST00000421968 KIAA0586Q9BVV6 1533 aa22.02■■□□□ 1.12
UFD1-203ENST00000421968 CUL7Q14999 1698 aa22.01■■□□□ 1.11
UFD1-203ENST00000421968 EPRSP07814 1512 aaKnown RBP22.01■■□□□ 1.11
UFD1-203ENST00000421968 BIVM-ERCC5R4GMW8 1640 aa21.96■■□□□ 1.11
UFD1-203ENST00000421968 KIF21BO75037 1637 aa21.93■■□□□ 1.1
UFD1-203ENST00000421968 CERKQ8TCT0 537 aa21.93■■□□□ 1.1
UFD1-203ENST00000421968 TNIKQ9UKE5 1360 aa21.93■■□□□ 1.1
UFD1-203ENST00000421968 PTPRMP28827 1452 aa21.92■■□□□ 1.1
UFD1-203ENST00000421968 UHRF1BP1LA0JNW5 1464 aa21.9■■□□□ 1.1
UFD1-203ENST00000421968 PCF11O94913 1555 aaKnown RBP21.89■■□□□ 1.09
UFD1-203ENST00000421968 CARMIL2Q6F5E8 1435 aa21.88■■□□□ 1.09
UFD1-203ENST00000421968 UACAQ9BZF9 1416 aa21.86■■□□□ 1.09
UFD1-203ENST00000421968 KDM5BQ9UGL1 1544 aa21.81■■□□□ 1.08
UFD1-203ENST00000421968 SPATA31D1Q6ZQQ2 1576 aa21.81■■□□□ 1.08
UFD1-203ENST00000421968 ADAMTSL3P82987 1691 aa21.81■■□□□ 1.08
UFD1-203ENST00000421968 ZCCHC11Q5TAX3 1644 aaKnown RBP21.77■■□□□ 1.08
UFD1-203ENST00000421968 HSPA2P54652 639 aa21.77■■□□□ 1.08
UFD1-203ENST00000421968 CD109Q6YHK3 1445 aa21.76■■□□□ 1.07
UFD1-203ENST00000421968 MAGI3Q5TCQ9 1506 aa21.75■■□□□ 1.07
UFD1-203ENST00000421968 WDR7Q9Y4E6 1490 aa21.73■■□□□ 1.07
UFD1-203ENST00000421968 IGF1RP08069 1367 aa21.7■■□□□ 1.06
UFD1-203ENST00000421968 KCNH8Q96L42 1107 aa21.68■■□□□ 1.06
UFD1-203ENST00000421968 CFAP43Q8NDM7 1665 aa21.68■■□□□ 1.06
UFD1-203ENST00000421968 MADDQ8WXG6 1647 aa21.67■■□□□ 1.06
UFD1-203ENST00000421968 ARID4BQ4LE39 1312 aaPredicted RBP21.65■■□□□ 1.06
UFD1-203ENST00000421968 BCORL1Q5H9F3 1711 aa21.63■■□□□ 1.05
UFD1-203ENST00000421968 IQGAP2Q13576 1575 aa21.63■■□□□ 1.05
UFD1-203ENST00000421968 ARAP3Q8WWN8 1544 aa21.62■■□□□ 1.05
UFD1-203ENST00000421968 DISP1Q96F81 1524 aa21.62■■□□□ 1.05
UFD1-203ENST00000421968 PLPPR3Q6T4P5 718 aa21.6■■□□□ 1.05
UFD1-203ENST00000421968 RIMS1Q86UR5 1692 aaKnown RBP21.57■■□□□ 1.04
UFD1-203ENST00000421968 KIF27Q86VH2 1401 aa21.55■■□□□ 1.04
UFD1-203ENST00000421968 CARMIL1Q5VZK9 1371 aa21.54■■□□□ 1.04
UFD1-203ENST00000421968 RAPGEF3O95398 923 aa21.52■■□□□ 1.04
UFD1-203ENST00000421968 PHLDB1Q86UU1 1377 aa21.46■■□□□ 1.03
UFD1-203ENST00000421968 KIAA0556O60303 1618 aa21.44■■□□□ 1.02
UFD1-203ENST00000421968 UGGT2Q9NYU1 1516 aa21.44■■□□□ 1.02
UFD1-203ENST00000421968 DMRT2Q9Y5R5 561 aa21.42■■□□□ 1.02
UFD1-203ENST00000421968 YEATS2Q9ULM3 1422 aa21.38■■□□□ 1.01
UFD1-203ENST00000421968 POGZQ7Z3K3 1410 aa21.35■■□□□ 1.01
UFD1-203ENST00000421968 FRMPD1Q5SYB0 1578 aa21.34■■□□□ 1.01
UFD1-203ENST00000421968 SUPT5HO00267 1087 aaKnown RBP21.33■■□□□ 1.01
UFD1-203ENST00000421968 NEO1Q92859 1461 aa21.32■■□□□ 1
UFD1-203ENST00000421968 ABCA8O94911 1581 aa21.32■■□□□ 1
UFD1-203ENST00000421968 ARHGEF40Q8TER5 1519 aa21.32■■□□□ 1
UFD1-203ENST00000421968 STRCQ7RTU9 1775 aa21.31■■□□□ 1
UFD1-203ENST00000421968 MLECQ14165 292 aa21.29■■□□□ 1
UFD1-203ENST00000421968 ABCA9Q8IUA7 1624 aa21.29■■□□□ 1
UFD1-203ENST00000421968 FANCAO15360 1455 aa21.28■■□□□ 1
UFD1-203ENST00000421968 ARID3CA6NKF2 412 aa21.28■■□□□ 1
UFD1-203ENST00000421968 PREX1Q8TCU6 1659 aa21.27■■□□□ 1
UFD1-203ENST00000421968 FER1L4A9Z1Z3 1794 aa21.24■□□□□ 0.99
UFD1-203ENST00000421968 TTC37Q6PGP7 1564 aa21.23■□□□□ 0.99
UFD1-203ENST00000421968 AKNAQ7Z591 1439 aa21.22■□□□□ 0.99
UFD1-203ENST00000421968 IQSEC2Q5JU85 1478 aa21.22■□□□□ 0.99
UFD1-203ENST00000421968 LTBP4Q8N2S1 1624 aa21.2■□□□□ 0.98
UFD1-203ENST00000421968 PTPRTO14522 1441 aa21.2■□□□□ 0.98
UFD1-203ENST00000421968 DENND4BO75064 1496 aaPredicted RBP21.19■□□□□ 0.98
UFD1-203ENST00000421968 GOLGA3Q08378 1498 aa21.19■□□□□ 0.98
UFD1-203ENST00000421968 RAPGEF2Q9Y4G8 1499 aa21.19■□□□□ 0.98
UFD1-203ENST00000421968 SIGLEC1Q9BZZ2 1709 aa21.18■□□□□ 0.98
UFD1-203ENST00000421968 CEBPAP49715 358 aaPredicted RBP21.18■□□□□ 0.98
UFD1-203ENST00000421968 ATP10BO94823 1461 aa21.17■□□□□ 0.98
UFD1-203ENST00000421968 RICTORQ6R327 1708 aa21.16■□□□□ 0.98
UFD1-203ENST00000421968 UHRF1BP1Q6BDS2 1440 aa21.15■□□□□ 0.98
UFD1-203ENST00000421968 UBAP1LF5GYI3 381 aa21.15■□□□□ 0.98
UFD1-203ENST00000421968 FHOD3Q2V2M9 1422 aa21.13■□□□□ 0.97
UFD1-203ENST00000421968 ZFYVE16Q7Z3T8 1539 aa21.13■□□□□ 0.97
UFD1-203ENST00000421968 FAM9AQ8IZU1 332 aaPredicted RBP21.11■□□□□ 0.97
UFD1-203ENST00000421968 SETD1BQ9UPS6 1966 aaKnown RBP21.1■□□□□ 0.97
UFD1-203ENST00000421968 EFCAB5A4FU69 1503 aa21.1■□□□□ 0.97
UFD1-203ENST00000421968 MED1Q15648 1581 aaPredicted RBP21.08■□□□□ 0.97
UFD1-203ENST00000421968 ZMYM4Q5VZL5 1548 aa21.07■□□□□ 0.96
UFD1-203ENST00000421968 ARHGEF12Q9NZN5 1544 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms