RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 DIP2BQ9P265 1576 aa12.2□□□□□ -0.46
PMS1-208ENST00000421722 NPM1P06748 294 aaKnown RBP eCLIP12.2□□□□□ -0.46
PMS1-208ENST00000421722 FAM69CQ0P6D2 419 aa12.2□□□□□ -0.46
PMS1-208ENST00000421722 TOP2BQ02880 1626 aa12.18□□□□□ -0.46
PMS1-208ENST00000421722 JPH4Q96JJ6 628 aa12.18□□□□□ -0.46
PMS1-208ENST00000421722 KDM4FA0A1W2PPD8 638 aa12.17□□□□□ -0.46
PMS1-208ENST00000421722 KDM6BO15054 1643 aa12.17□□□□□ -0.46
PMS1-208ENST00000421722 RUSC2Q8N2Y8 1516 aa12.15□□□□□ -0.47
PMS1-208ENST00000421722 ILDR1Q86SU0 546 aaPredicted RBP12.14□□□□□ -0.47
PMS1-208ENST00000421722 ADCY10Q96PN6 1610 aa12.14□□□□□ -0.47
PMS1-208ENST00000421722 KIAA0586Q9BVV6 1533 aa12.07□□□□□ -0.48
PMS1-208ENST00000421722 GLI2P10070 1586 aa12.07□□□□□ -0.48
PMS1-208ENST00000421722 TSPOAP1O95153 1857 aa12.04□□□□□ -0.48
PMS1-208ENST00000421722 PLB1Q6P1J6 1458 aa12.02□□□□□ -0.48
PMS1-208ENST00000421722 ADGRL1O94910 1474 aa12.02□□□□□ -0.49
PMS1-208ENST00000421722 CUL7Q14999 1698 aa12□□□□□ -0.49
PMS1-208ENST00000421722 PPRC1Q5VV67 1664 aaKnown RBP12□□□□□ -0.49
PMS1-208ENST00000421722 ABCC2Q92887 1545 aa12□□□□□ -0.49
PMS1-208ENST00000421722 UHRF1BP1LA0JNW5 1464 aa12□□□□□ -0.49
PMS1-208ENST00000421722 PTPRGP23470 1445 aa12□□□□□ -0.49
PMS1-208ENST00000421722 TNIKQ9UKE5 1360 aa11.97□□□□□ -0.49
PMS1-208ENST00000421722 CARMIL2Q6F5E8 1435 aa11.97□□□□□ -0.49
PMS1-208ENST00000421722 ASXL2Q76L83 1435 aa11.96□□□□□ -0.49
PMS1-208ENST00000421722 IGF1RP08069 1367 aa11.96□□□□□ -0.5
PMS1-208ENST00000421722 TEX14Q8IWB6 1497 aa11.96□□□□□ -0.5
PMS1-208ENST00000421722 HECW2Q9P2P5 1572 aa11.95□□□□□ -0.5
PMS1-208ENST00000421722 MAP3K4Q9Y6R4 1608 aa11.94□□□□□ -0.5
PMS1-208ENST00000421722 KIF27Q86VH2 1401 aa11.93□□□□□ -0.5
PMS1-208ENST00000421722 EPRSP07814 1512 aaKnown RBP11.92□□□□□ -0.5
PMS1-208ENST00000421722 UACAQ9BZF9 1416 aa11.91□□□□□ -0.5
PMS1-208ENST00000421722 KDM5BQ9UGL1 1544 aa11.9□□□□□ -0.5
PMS1-208ENST00000421722 COL17A1Q9UMD9 1497 aaPredicted RBP11.9□□□□□ -0.5
PMS1-208ENST00000421722 IQGAP2Q13576 1575 aa11.88□□□□□ -0.51
PMS1-208ENST00000421722 CARMIL1Q5VZK9 1371 aa11.87□□□□□ -0.51
PMS1-208ENST00000421722 SUPT5HO00267 1087 aaKnown RBP11.86□□□□□ -0.51
PMS1-208ENST00000421722 FBXO41Q8TF61 875 aa11.86□□□□□ -0.51
PMS1-208ENST00000421722 ZCCHC11Q5TAX3 1644 aaKnown RBP11.84□□□□□ -0.51
PMS1-208ENST00000421722 DISP1Q96F81 1524 aa11.84□□□□□ -0.51
PMS1-208ENST00000421722 UGGT2Q9NYU1 1516 aa11.84□□□□□ -0.51
PMS1-208ENST00000421722 MAGI3Q5TCQ9 1506 aa11.83□□□□□ -0.52
PMS1-208ENST00000421722 CFAP43Q8NDM7 1665 aa11.81□□□□□ -0.52
PMS1-208ENST00000421722 WDR7Q9Y4E6 1490 aa11.81□□□□□ -0.52
PMS1-208ENST00000421722 TTBK1Q5TCY1 1321 aaPredicted RBP11.78□□□□□ -0.52
PMS1-208ENST00000421722 KIAA0556O60303 1618 aa11.78□□□□□ -0.52
PMS1-208ENST00000421722 CD109Q6YHK3 1445 aa11.76□□□□□ -0.53
PMS1-208ENST00000421722 ARAP3Q8WWN8 1544 aa11.75□□□□□ -0.53
PMS1-208ENST00000421722 PHLDB1Q86UU1 1377 aa11.74□□□□□ -0.53
PMS1-208ENST00000421722 RAPGEF2Q9Y4G8 1499 aa11.74□□□□□ -0.53
PMS1-208ENST00000421722 KIF21BO75037 1637 aa11.72□□□□□ -0.53
PMS1-208ENST00000421722 ADAMTSL3P82987 1691 aa11.72□□□□□ -0.53
PMS1-208ENST00000421722 ABCA8O94911 1581 aa11.72□□□□□ -0.53
PMS1-208ENST00000421722 GOLGA3Q08378 1498 aa11.72□□□□□ -0.53
PMS1-208ENST00000421722 PTPRMP28827 1452 aa11.7□□□□□ -0.54
PMS1-208ENST00000421722 CTTNBP2Q8WZ74 1663 aa11.66□□□□□ -0.54
PMS1-208ENST00000421722 PCF11O94913 1555 aaKnown RBP11.66□□□□□ -0.54
PMS1-208ENST00000421722 BCORL1Q5H9F3 1711 aa11.65□□□□□ -0.54
PMS1-208ENST00000421722 NEO1Q92859 1461 aa11.64□□□□□ -0.55
PMS1-208ENST00000421722 KCNH8Q96L42 1107 aa11.64□□□□□ -0.55
PMS1-208ENST00000421722 ABCA9Q8IUA7 1624 aa11.64□□□□□ -0.55
PMS1-208ENST00000421722 FAM9AQ8IZU1 332 aaPredicted RBP11.62□□□□□ -0.55
PMS1-208ENST00000421722 LMTK3Q96Q04 1460 aa11.61□□□□□ -0.55
PMS1-208ENST00000421722 MADDQ8WXG6 1647 aa11.6□□□□□ -0.55
PMS1-208ENST00000421722 ATP10BO94823 1461 aa11.59□□□□□ -0.55
PMS1-208ENST00000421722 POTEDQ86YR6 584 aa11.58□□□□□ -0.55
PMS1-208ENST00000421722 FRMPD1Q5SYB0 1578 aa11.57□□□□□ -0.56
PMS1-208ENST00000421722 ARHGEF40Q8TER5 1519 aa11.56□□□□□ -0.56
PMS1-208ENST00000421722 RIMS1Q86UR5 1692 aaKnown RBP11.55□□□□□ -0.56
PMS1-208ENST00000421722 CERKQ8TCT0 537 aa11.55□□□□□ -0.56
PMS1-208ENST00000421722 POGZQ7Z3K3 1410 aa11.54□□□□□ -0.56
PMS1-208ENST00000421722 CFAP74Q9C0B2 1584 aa11.53□□□□□ -0.56
PMS1-208ENST00000421722 ARID4BQ4LE39 1312 aaPredicted RBP11.53□□□□□ -0.56
PMS1-208ENST00000421722 PRXQ9BXM0 1461 aa11.53□□□□□ -0.56
PMS1-208ENST00000421722 RAPGEF3O95398 923 aa11.53□□□□□ -0.56
PMS1-208ENST00000421722 FHOD3Q2V2M9 1422 aa11.53□□□□□ -0.56
PMS1-208ENST00000421722 FANCAO15360 1455 aa11.52□□□□□ -0.57
PMS1-208ENST00000421722 DENND4BO75064 1496 aaPredicted RBP11.52□□□□□ -0.57
PMS1-208ENST00000421722 AKNAQ7Z591 1439 aa11.51□□□□□ -0.57
PMS1-208ENST00000421722 ZMYM4Q5VZL5 1548 aa11.51□□□□□ -0.57
PMS1-208ENST00000421722 RICTORQ6R327 1708 aa11.51□□□□□ -0.57
PMS1-208ENST00000421722 RAPGEF6Q8TEU7 1601 aa11.5□□□□□ -0.57
PMS1-208ENST00000421722 MAGI2Q86UL8 1455 aa11.5□□□□□ -0.57
PMS1-208ENST00000421722 SOCS7O14512 581 aa11.49□□□□□ -0.57
PMS1-208ENST00000421722 EFCAB5A4FU69 1503 aa11.49□□□□□ -0.57
PMS1-208ENST00000421722 SAMD9Q5K651 1589 aa11.49□□□□□ -0.57
PMS1-208ENST00000421722 TTC37Q6PGP7 1564 aa11.47□□□□□ -0.57
PMS1-208ENST00000421722 ZFYVE16Q7Z3T8 1539 aa11.47□□□□□ -0.57
PMS1-208ENST00000421722 HSPA2P54652 639 aa11.46□□□□□ -0.58
PMS1-208ENST00000421722 DMRT2Q9Y5R5 561 aa11.45□□□□□ -0.58
PMS1-208ENST00000421722 FER1L4A9Z1Z3 1794 aa11.44□□□□□ -0.58
PMS1-208ENST00000421722 DISP3Q9P2K9 1392 aa11.44□□□□□ -0.58
PMS1-208ENST00000421722 PREX1Q8TCU6 1659 aa11.44□□□□□ -0.58
PMS1-208ENST00000421722 NUP153P49790 1475 aaKnown RBP11.43□□□□□ -0.58
PMS1-208ENST00000421722 ARHGEF12Q9NZN5 1544 aa11.43□□□□□ -0.58
PMS1-208ENST00000421722 YEATS2Q9ULM3 1422 aa11.42□□□□□ -0.58
PMS1-208ENST00000421722 ARID3CA6NKF2 412 aa11.42□□□□□ -0.58
PMS1-208ENST00000421722 PLEKHD1A6NEE1 506 aa11.42□□□□□ -0.58
PMS1-208ENST00000421722 ILDR2Q71H61 639 aa11.42□□□□□ -0.58
PMS1-208ENST00000421722 IQSEC2Q5JU85 1478 aa11.41□□□□□ -0.58
PMS1-208ENST00000421722 P3H3Q8IVL6 736 aa11.4□□□□□ -0.58
PMS1-208ENST00000421722 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms