RNA–Protein interactions for RNA: ENST00000421503.6

CCDC117-202, Transcript of coiled-coil domain containing 117, humanhuman

TSL 2 BASIC

Gene CCDC117, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-202ENST00000421503 CUX2O14529 1486 aa19.89■□□□□ 0.77
CCDC117-202ENST00000421503 CDK11AQ9UQ88 783 aaPredicted RBP19.89■□□□□ 0.77
CCDC117-202ENST00000421503 ANP32EQ9BTT0 268 aa19.87■□□□□ 0.77
CCDC117-202ENST00000421503 EIF4G1Q04637 1599 aaKnown RBP19.86■□□□□ 0.77
CCDC117-202ENST00000421503 CARMIL1Q5VZK9 1371 aa19.86■□□□□ 0.77
CCDC117-202ENST00000421503 ARAP1Q96P48 1450 aa19.84■□□□□ 0.77
CCDC117-202ENST00000421503 MTUS2Q5JR59 1369 aa19.84■□□□□ 0.77
CCDC117-202ENST00000421503 SETD5Q9C0A6 1442 aa19.83■□□□□ 0.77
CCDC117-202ENST00000421503 PPP1R15AO75807 674 aaPredicted RBP19.78■□□□□ 0.76
CCDC117-202ENST00000421503 RBM19Q9Y4C8 960 aaKnown RBP19.78■□□□□ 0.76
CCDC117-202ENST00000421503 FOXD1Q16676 465 aa19.76■□□□□ 0.75
CCDC117-202ENST00000421503 ZNF777Q9ULD5 760 aaPredicted RBP19.74■□□□□ 0.75
CCDC117-202ENST00000421503 MRS2Q9HD23 443 aa19.74■□□□□ 0.75
CCDC117-202ENST00000421503 SALL2Q9Y467 1007 aaPredicted RBP19.71■□□□□ 0.75
CCDC117-202ENST00000421503 FHOD3Q2V2M9 1422 aa19.7■□□□□ 0.74
CCDC117-202ENST00000421503 PHLDB1Q86UU1 1377 aa19.7■□□□□ 0.74
CCDC117-202ENST00000421503 IGF1RP08069 1367 aa19.66■□□□□ 0.74
CCDC117-202ENST00000421503 EIF4G2P78344 907 aaKnown RBP eCLIP19.66■□□□□ 0.74
CCDC117-202ENST00000421503 FBLN2P98095 1184 aa19.66■□□□□ 0.74
CCDC117-202ENST00000421503 ARHGAP35Q9NRY4 1499 aa19.65■□□□□ 0.74
CCDC117-202ENST00000421503 PRXQ9BXM0 1461 aa19.65■□□□□ 0.74
CCDC117-202ENST00000421503 B4GALNT3Q6L9W6 998 aa19.64■□□□□ 0.74
CCDC117-202ENST00000421503 HSPA5P11021 654 aaKnown RBP19.62■□□□□ 0.73
CCDC117-202ENST00000421503 RRBP1Q9P2E9 1410 aaKnown RBP19.61■□□□□ 0.73
CCDC117-202ENST00000421503 CCER2I3L3R5 266 aa19.6■□□□□ 0.73
CCDC117-202ENST00000421503 BICRAQ9NZM4 1560 aa19.59■□□□□ 0.73
CCDC117-202ENST00000421503 NBR1Q14596 966 aa19.59■□□□□ 0.73
CCDC117-202ENST00000421503 FHAD1B1AJZ9 1412 aa19.59■□□□□ 0.73
CCDC117-202ENST00000421503 SLC4A1APQ9BWU0 796 aaKnown RBP19.57■□□□□ 0.72
CCDC117-202ENST00000421503 TDRD9Q8NDG6 1382 aaKnown RBP19.56■□□□□ 0.72
CCDC117-202ENST00000421503 NPM2Q86SE8 214 aaKnown RBP19.56■□□□□ 0.72
CCDC117-202ENST00000421503 KDM2AQ9Y2K7 1162 aa19.55■□□□□ 0.72
CCDC117-202ENST00000421503 TIMELESSQ9UNS1 1208 aa19.53■□□□□ 0.72
CCDC117-202ENST00000421503 CUX1P39880 1505 aa19.53■□□□□ 0.72
CCDC117-202ENST00000421503 TOP2BQ02880 1626 aa19.51■□□□□ 0.71
CCDC117-202ENST00000421503 UNC13AQ9UPW8 1703 aa19.5■□□□□ 0.71
CCDC117-202ENST00000421503 WDR97A6NE52 1622 aa19.5■□□□□ 0.71
CCDC117-202ENST00000421503 L3MBTL2Q969R5 705 aa19.48■□□□□ 0.71
CCDC117-202ENST00000421503 BCL11AQ9H165 835 aa19.48■□□□□ 0.71
CCDC117-202ENST00000421503 CCDC136Q96JN2 1154 aa19.48■□□□□ 0.71
CCDC117-202ENST00000421503 CADPSQ9ULU8 1353 aa19.48■□□□□ 0.71
CCDC117-202ENST00000421503 LRRC9Q6ZRR7 1453 aa19.47■□□□□ 0.71
CCDC117-202ENST00000421503 TMC1Q8TDI8 760 aa19.45■□□□□ 0.7
CCDC117-202ENST00000421503 ERICH3Q5RHP9 1530 aa19.45■□□□□ 0.7
CCDC117-202ENST00000421503 RAD54L2Q9Y4B4 1467 aa19.44■□□□□ 0.7
CCDC117-202ENST00000421503 CCDC184Q52MB2 194 aa19.43■□□□□ 0.7
CCDC117-202ENST00000421503 RTL5Q5HYW3 569 aaPredicted RBP19.43■□□□□ 0.7
CCDC117-202ENST00000421503 FGD5Q6ZNL6 1462 aa19.43■□□□□ 0.7
CCDC117-202ENST00000421503 MPHOSPH9Q99550 1183 aa19.42■□□□□ 0.7
CCDC117-202ENST00000421503 PPP4R2Q9NY27 417 aa19.42■□□□□ 0.7
CCDC117-202ENST00000421503 NCAPD3P42695 1498 aa19.36■□□□□ 0.69
CCDC117-202ENST00000421503 ANP32AP39687 249 aaKnown RBP19.36■□□□□ 0.69
CCDC117-202ENST00000421503 WASHC2AQ641Q2 1341 aa19.35■□□□□ 0.69
CCDC117-202ENST00000421503 CCDC18Q5T9S5 1454 aa19.35■□□□□ 0.69
CCDC117-202ENST00000421503 CFTRP13569 1480 aa19.34■□□□□ 0.69
CCDC117-202ENST00000421503 MYT1LQ9UL68 1186 aa19.33■□□□□ 0.68
CCDC117-202ENST00000421503 RGL3Q3MIN7 710 aa19.33■□□□□ 0.68
CCDC117-202ENST00000421503 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.32■□□□□ 0.685e-6■□□□□ 8.1
CCDC117-202ENST00000421503 MAPKBP1O60336 1514 aa19.31■□□□□ 0.68
CCDC117-202ENST00000421503 FGD6Q6ZV73 1430 aa19.3■□□□□ 0.68
CCDC117-202ENST00000421503 PRKRIP1Q9H875 184 aaPredicted RBP19.3■□□□□ 0.68
CCDC117-202ENST00000421503 CFDP1Q9UEE9 299 aaPredicted RBP19.3■□□□□ 0.68
CCDC117-202ENST00000421503 FMN1Q68DA7 1419 aa19.3■□□□□ 0.68
CCDC117-202ENST00000421503 PEG3Q9GZU2 1588 aa19.29■□□□□ 0.68
CCDC117-202ENST00000421503 TIAM1Q13009 1591 aa19.29■□□□□ 0.68
CCDC117-202ENST00000421503 DAXXQ9UER7 740 aaPredicted RBP19.27■□□□□ 0.68
CCDC117-202ENST00000421503 ZNF644Q9H582 1327 aaPredicted RBP19.27■□□□□ 0.68
CCDC117-202ENST00000421503 FANCD2Q9BXW9 1451 aa19.27■□□□□ 0.68
CCDC117-202ENST00000421503 CARD11Q9BXL7 1154 aa19.26■□□□□ 0.67
CCDC117-202ENST00000421503 ZBTB47Q9UFB7 747 aaPredicted RBP19.25■□□□□ 0.67
CCDC117-202ENST00000421503 C11orf95C9JLR9 678 aaPredicted RBP19.25■□□□□ 0.67
CCDC117-202ENST00000421503 MSH5O43196 834 aa19.25■□□□□ 0.67
CCDC117-202ENST00000421503 PKD2Q13563 968 aa19.21■□□□□ 0.67
CCDC117-202ENST00000421503 UACAQ9BZF9 1416 aa19.2■□□□□ 0.66
CCDC117-202ENST00000421503 NBPF8Q3BBV2 869 aa19.19■□□□□ 0.66
CCDC117-202ENST00000421503 NESP48681 1621 aa19.18■□□□□ 0.66
CCDC117-202ENST00000421503 TSPY4P0CV99 314 aa19.18■□□□□ 0.66
CCDC117-202ENST00000421503 TSPY10P0CW01 314 aa19.18■□□□□ 0.66
CCDC117-202ENST00000421503 NOP58Q9Y2X3 529 aaKnown RBP19.18■□□□□ 0.66
CCDC117-202ENST00000421503 DCAF11Q8TEB1 546 aa19.17■□□□□ 0.66
CCDC117-202ENST00000421503 CHMP7Q8WUX9 453 aaPredicted RBP19.17■□□□□ 0.66
CCDC117-202ENST00000421503 DEKP35659 375 aaKnown RBP19.16■□□□□ 0.66
CCDC117-202ENST00000421503 DNAJC5BQ9UF47 199 aa19.16■□□□□ 0.66
CCDC117-202ENST00000421503 LAS1LQ9Y4W2 734 aaKnown RBP19.16■□□□□ 0.66
CCDC117-202ENST00000421503 CASKIN1Q8WXD9 1431 aa19.15■□□□□ 0.66
CCDC117-202ENST00000421503 NCOA2Q15596 1464 aa19.14■□□□□ 0.65
CCDC117-202ENST00000421503 PTPRKQ15262 1439 aa19.14■□□□□ 0.65
CCDC117-202ENST00000421503 CC2D1BQ5T0F9 858 aaKnown RBP19.14■□□□□ 0.65
CCDC117-202ENST00000421503 KIF7Q2M1P5 1343 aa19.14■□□□□ 0.65
CCDC117-202ENST00000421503 BIVM-ERCC5R4GMW8 1640 aa19.14■□□□□ 0.65
CCDC117-202ENST00000421503 PCF11O94913 1555 aaKnown RBP19.13■□□□□ 0.65
CCDC117-202ENST00000421503 MYOM3Q5VTT5 1437 aa19.13■□□□□ 0.65
CCDC117-202ENST00000421503 CCDC7Q96M83 1385 aa19.1■□□□□ 0.65
CCDC117-202ENST00000421503 NAIPQ13075 1403 aa19.1■□□□□ 0.65
CCDC117-202ENST00000421503 RTN4Q9NQC3 1192 aaKnown RBP19.09■□□□□ 0.65
CCDC117-202ENST00000421503 AQRO60306 1485 aaKnown RBP eCLIP19.07■□□□□ 0.646e-7■■■□□ 15.2
CCDC117-202ENST00000421503 PLEKHD1A6NEE1 506 aa19.07■□□□□ 0.64
CCDC117-202ENST00000421503 HFM1A2PYH4 1435 aa19.07■□□□□ 0.64
CCDC117-202ENST00000421503 ZBED9Q6R2W3 1325 aa19.06■□□□□ 0.64
CCDC117-202ENST00000421503 NUDCQ9Y266 331 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms