RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 PRG4Q92954 1404 aaPredicted RBP17.02■□□□□ 0.31
TRIM39-206ENST00000420746 FHAD1B1AJZ9 1412 aa17■□□□□ 0.31
TRIM39-206ENST00000420746 HECW2Q9P2P5 1572 aa16.99■□□□□ 0.31
TRIM39-206ENST00000420746 ADGRL1O94910 1474 aa16.99■□□□□ 0.31
TRIM39-206ENST00000420746 FBXO41Q8TF61 875 aa16.94■□□□□ 0.3
TRIM39-206ENST00000420746 JPH4Q96JJ6 628 aa16.94■□□□□ 0.3
TRIM39-206ENST00000420746 ADCY10Q96PN6 1610 aa16.92■□□□□ 0.3
TRIM39-206ENST00000420746 ERICH3Q5RHP9 1530 aa16.9■□□□□ 0.3
TRIM39-206ENST00000420746 WRNQ14191 1432 aaPredicted RBP eCLIP16.88■□□□□ 0.29
TRIM39-206ENST00000420746 TSPOAP1O95153 1857 aa16.86■□□□□ 0.29
TRIM39-206ENST00000420746 RUSC2Q8N2Y8 1516 aa16.83■□□□□ 0.28
TRIM39-206ENST00000420746 GLI2P10070 1586 aa16.79■□□□□ 0.28
TRIM39-206ENST00000420746 PPRC1Q5VV67 1664 aaKnown RBP16.77■□□□□ 0.28
TRIM39-206ENST00000420746 PLB1Q6P1J6 1458 aa16.73■□□□□ 0.27
TRIM39-206ENST00000420746 COL17A1Q9UMD9 1497 aaPredicted RBP16.73■□□□□ 0.27
TRIM39-206ENST00000420746 TOP2BQ02880 1626 aa16.72■□□□□ 0.27
TRIM39-206ENST00000420746 ABCC2Q92887 1545 aa16.7■□□□□ 0.26
TRIM39-206ENST00000420746 BIVM-ERCC5R4GMW8 1640 aa16.7■□□□□ 0.26
TRIM39-206ENST00000420746 LMTK3Q96Q04 1460 aa16.7■□□□□ 0.26
TRIM39-206ENST00000420746 KIAA0586Q9BVV6 1533 aa16.7■□□□□ 0.26
TRIM39-206ENST00000420746 ASXL2Q76L83 1435 aa16.7■□□□□ 0.26
TRIM39-206ENST00000420746 TEX14Q8IWB6 1497 aa16.68■□□□□ 0.26
TRIM39-206ENST00000420746 PTPRGP23470 1445 aa16.66■□□□□ 0.26
TRIM39-206ENST00000420746 CHIC1Q5VXU3 224 aa16.63■□□□□ 0.25
TRIM39-206ENST00000420746 MAP3K4Q9Y6R4 1608 aa16.63■□□□□ 0.25
TRIM39-206ENST00000420746 UHRF1BP1LA0JNW5 1464 aa16.61■□□□□ 0.25
TRIM39-206ENST00000420746 EPRSP07814 1512 aaKnown RBP16.6■□□□□ 0.25
TRIM39-206ENST00000420746 TNIKQ9UKE5 1360 aa16.58■□□□□ 0.24
TRIM39-206ENST00000420746 SOCS7O14512 581 aa16.57■□□□□ 0.24
TRIM39-206ENST00000420746 CARMIL2Q6F5E8 1435 aa16.55■□□□□ 0.24
TRIM39-206ENST00000420746 CUL7Q14999 1698 aa16.53■□□□□ 0.24
TRIM39-206ENST00000420746 KDM5BQ9UGL1 1544 aa16.53■□□□□ 0.24
TRIM39-206ENST00000420746 UACAQ9BZF9 1416 aa16.53■□□□□ 0.24
TRIM39-206ENST00000420746 PTPRMP28827 1452 aa16.47■□□□□ 0.23
TRIM39-206ENST00000420746 MAGI3Q5TCQ9 1506 aa16.46■□□□□ 0.23
TRIM39-206ENST00000420746 IGF1RP08069 1367 aa16.46■□□□□ 0.23
TRIM39-206ENST00000420746 ILDR2Q71H61 639 aa16.45■□□□□ 0.22
TRIM39-206ENST00000420746 PCF11O94913 1555 aaKnown RBP16.45■□□□□ 0.22
TRIM39-206ENST00000420746 WDR7Q9Y4E6 1490 aa16.43■□□□□ 0.22
TRIM39-206ENST00000420746 KIF21BO75037 1637 aa16.43■□□□□ 0.22
TRIM39-206ENST00000420746 TTBK1Q5TCY1 1321 aaPredicted RBP16.43■□□□□ 0.22
TRIM39-206ENST00000420746 ZCCHC11Q5TAX3 1644 aaKnown RBP16.42■□□□□ 0.22
TRIM39-206ENST00000420746 DISP3Q9P2K9 1392 aa16.42■□□□□ 0.22
TRIM39-206ENST00000420746 ADAMTSL3P82987 1691 aa16.41■□□□□ 0.22
TRIM39-206ENST00000420746 IQGAP2Q13576 1575 aa16.39■□□□□ 0.21
TRIM39-206ENST00000420746 CD109Q6YHK3 1445 aa16.39■□□□□ 0.21
TRIM39-206ENST00000420746 CFAP43Q8NDM7 1665 aa16.38■□□□□ 0.21
TRIM39-206ENST00000420746 DISP1Q96F81 1524 aa16.38■□□□□ 0.21
TRIM39-206ENST00000420746 KIF27Q86VH2 1401 aa16.37■□□□□ 0.21
TRIM39-206ENST00000420746 ARAP3Q8WWN8 1544 aa16.36■□□□□ 0.21
TRIM39-206ENST00000420746 CERKQ8TCT0 537 aa16.36■□□□□ 0.21
TRIM39-206ENST00000420746 CARMIL1Q5VZK9 1371 aa16.32■□□□□ 0.2
TRIM39-206ENST00000420746 UGGT2Q9NYU1 1516 aa16.29■□□□□ 0.2
TRIM39-206ENST00000420746 PHLDB1Q86UU1 1377 aa16.29■□□□□ 0.2
TRIM39-206ENST00000420746 BCORL1Q5H9F3 1711 aa16.28■□□□□ 0.2
TRIM39-206ENST00000420746 SPATA31D1Q6ZQQ2 1576 aa16.26■□□□□ 0.19
TRIM39-206ENST00000420746 MADDQ8WXG6 1647 aa16.26■□□□□ 0.19
TRIM39-206ENST00000420746 KIAA0556O60303 1618 aa16.25■□□□□ 0.19
TRIM39-206ENST00000420746 KCNH8Q96L42 1107 aa16.21■□□□□ 0.19
TRIM39-206ENST00000420746 HSPA2P54652 639 aa16.2■□□□□ 0.18
TRIM39-206ENST00000420746 ABCA8O94911 1581 aa16.16■□□□□ 0.18
TRIM39-206ENST00000420746 ARID4BQ4LE39 1312 aaPredicted RBP16.16■□□□□ 0.18
TRIM39-206ENST00000420746 NEO1Q92859 1461 aa16.16■□□□□ 0.18
TRIM39-206ENST00000420746 RIMS1Q86UR5 1692 aaKnown RBP16.14■□□□□ 0.18
TRIM39-206ENST00000420746 RAPGEF3O95398 923 aa16.13■□□□□ 0.17
TRIM39-206ENST00000420746 ARHGEF40Q8TER5 1519 aa16.12■□□□□ 0.17
TRIM39-206ENST00000420746 FRMPD1Q5SYB0 1578 aa16.12■□□□□ 0.17
TRIM39-206ENST00000420746 ABCA9Q8IUA7 1624 aa16.12■□□□□ 0.17
TRIM39-206ENST00000420746 POGZQ7Z3K3 1410 aa16.1■□□□□ 0.17
TRIM39-206ENST00000420746 GOLGA3Q08378 1498 aa16.1■□□□□ 0.17
TRIM39-206ENST00000420746 RAPGEF2Q9Y4G8 1499 aa16.1■□□□□ 0.17
TRIM39-206ENST00000420746 DMRT2Q9Y5R5 561 aa16.09■□□□□ 0.17
TRIM39-206ENST00000420746 SUPT5HO00267 1087 aaKnown RBP16.08■□□□□ 0.16
TRIM39-206ENST00000420746 YEATS2Q9ULM3 1422 aa16.08■□□□□ 0.16
TRIM39-206ENST00000420746 FANCAO15360 1455 aa16.06■□□□□ 0.16
TRIM39-206ENST00000420746 TTC37Q6PGP7 1564 aa16.04■□□□□ 0.16
TRIM39-206ENST00000420746 IQSEC2Q5JU85 1478 aa16.03■□□□□ 0.16
TRIM39-206ENST00000420746 AKNAQ7Z591 1439 aa16.02■□□□□ 0.15
TRIM39-206ENST00000420746 ATP10BO94823 1461 aa16.01■□□□□ 0.15
TRIM39-206ENST00000420746 FHOD3Q2V2M9 1422 aa16.01■□□□□ 0.15
TRIM39-206ENST00000420746 DENND4BO75064 1496 aaPredicted RBP16■□□□□ 0.15
TRIM39-206ENST00000420746 PREX1Q8TCU6 1659 aa15.99■□□□□ 0.15
TRIM39-206ENST00000420746 ZMYM4Q5VZL5 1548 aa15.98■□□□□ 0.15
TRIM39-206ENST00000420746 PTPRTO14522 1441 aa15.97■□□□□ 0.15
TRIM39-206ENST00000420746 RICTORQ6R327 1708 aa15.97■□□□□ 0.15
TRIM39-206ENST00000420746 STRCQ7RTU9 1775 aa15.96■□□□□ 0.15
TRIM39-206ENST00000420746 EFCAB5A4FU69 1503 aa15.96■□□□□ 0.15
TRIM39-206ENST00000420746 PLPPR3Q6T4P5 718 aa15.96■□□□□ 0.15
TRIM39-206ENST00000420746 MAGI2Q86UL8 1455 aa15.96■□□□□ 0.14
TRIM39-206ENST00000420746 FAM9AQ8IZU1 332 aaPredicted RBP15.95■□□□□ 0.14
TRIM39-206ENST00000420746 CTTNBP2Q8WZ74 1663 aa15.95■□□□□ 0.14
TRIM39-206ENST00000420746 FER1L4A9Z1Z3 1794 aa15.95■□□□□ 0.14
TRIM39-206ENST00000420746 ZFYVE16Q7Z3T8 1539 aa15.94■□□□□ 0.14
TRIM39-206ENST00000420746 LTBP4Q8N2S1 1624 aa15.93■□□□□ 0.14
TRIM39-206ENST00000420746 ARHGEF12Q9NZN5 1544 aa15.93■□□□□ 0.14
TRIM39-206ENST00000420746 SIGLEC1Q9BZZ2 1709 aa15.91■□□□□ 0.14
TRIM39-206ENST00000420746 UHRF1BP1Q6BDS2 1440 aa15.91■□□□□ 0.14
TRIM39-206ENST00000420746 CFAP74Q9C0B2 1584 aa15.91■□□□□ 0.14
TRIM39-206ENST00000420746 ARID3CA6NKF2 412 aa15.87■□□□□ 0.13
TRIM39-206ENST00000420746 MLECQ14165 292 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms