RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 WRNQ14191 1432 aaPredicted RBP eCLIP18.62■□□□□ 0.57
TNFAIP3-202ENST00000420009 SHROOM2Q13796 1616 aa18.6■□□□□ 0.57
TNFAIP3-202ENST00000420009 BIVM-ERCC5R4GMW8 1640 aa18.58■□□□□ 0.56
TNFAIP3-202ENST00000420009 FHAD1B1AJZ9 1412 aa18.57■□□□□ 0.56
TNFAIP3-202ENST00000420009 TOP2BQ02880 1626 aa18.57■□□□□ 0.56
TNFAIP3-202ENST00000420009 ERICH3Q5RHP9 1530 aa18.54■□□□□ 0.56
TNFAIP3-202ENST00000420009 SUPT5HO00267 1087 aaKnown RBP18.45■□□□□ 0.54
TNFAIP3-202ENST00000420009 KIF13AQ9H1H9 1805 aa18.44■□□□□ 0.54
TNFAIP3-202ENST00000420009 PRG4Q92954 1404 aaPredicted RBP18.44■□□□□ 0.54
TNFAIP3-202ENST00000420009 RUSC2Q8N2Y8 1516 aa18.42■□□□□ 0.54
TNFAIP3-202ENST00000420009 JPH4Q96JJ6 628 aa18.38■□□□□ 0.53
TNFAIP3-202ENST00000420009 MAPKBP1O60336 1514 aa18.34■□□□□ 0.53
TNFAIP3-202ENST00000420009 ABCC10Q5T3U5 1492 aa18.34■□□□□ 0.53
TNFAIP3-202ENST00000420009 DIP2BQ9P265 1576 aa18.31■□□□□ 0.52
TNFAIP3-202ENST00000420009 ADCY10Q96PN6 1610 aa18.31■□□□□ 0.52
TNFAIP3-202ENST00000420009 FAM69CQ0P6D2 419 aa18.27■□□□□ 0.52
TNFAIP3-202ENST00000420009 KIAA0586Q9BVV6 1533 aa18.25■□□□□ 0.51
TNFAIP3-202ENST00000420009 NPM1P06748 294 aaKnown RBP eCLIP18.23■□□□□ 0.51
TNFAIP3-202ENST00000420009 CUL7Q14999 1698 aa18.21■□□□□ 0.51
TNFAIP3-202ENST00000420009 IGF1RP08069 1367 aa18.2■□□□□ 0.5
TNFAIP3-202ENST00000420009 KDM6BO15054 1643 aa18.19■□□□□ 0.5
TNFAIP3-202ENST00000420009 KIF27Q86VH2 1401 aa18.17■□□□□ 0.5
TNFAIP3-202ENST00000420009 KDM4FA0A1W2PPD8 638 aa18.11■□□□□ 0.49
TNFAIP3-202ENST00000420009 PTPRGP23470 1445 aa18.1■□□□□ 0.49
TNFAIP3-202ENST00000420009 TSPOAP1O95153 1857 aa18.09■□□□□ 0.49
TNFAIP3-202ENST00000420009 ABCC2Q92887 1545 aa18.08■□□□□ 0.49
TNFAIP3-202ENST00000420009 CARMIL1Q5VZK9 1371 aa18.06■□□□□ 0.48
TNFAIP3-202ENST00000420009 TNIKQ9UKE5 1360 aa18.06■□□□□ 0.48
TNFAIP3-202ENST00000420009 CARMIL2Q6F5E8 1435 aa18.06■□□□□ 0.48
TNFAIP3-202ENST00000420009 GLI2P10070 1586 aa18.04■□□□□ 0.48
TNFAIP3-202ENST00000420009 IQGAP2Q13576 1575 aa18.04■□□□□ 0.48
TNFAIP3-202ENST00000420009 ASXL2Q76L83 1435 aa18.04■□□□□ 0.48
TNFAIP3-202ENST00000420009 PPRC1Q5VV67 1664 aaKnown RBP18.03■□□□□ 0.48
TNFAIP3-202ENST00000420009 UHRF1BP1LA0JNW5 1464 aa18.03■□□□□ 0.48
TNFAIP3-202ENST00000420009 PLB1Q6P1J6 1458 aa18.03■□□□□ 0.48
TNFAIP3-202ENST00000420009 DISP1Q96F81 1524 aa17.99■□□□□ 0.47
TNFAIP3-202ENST00000420009 UACAQ9BZF9 1416 aa17.98■□□□□ 0.47
TNFAIP3-202ENST00000420009 TTBK1Q5TCY1 1321 aaPredicted RBP17.97■□□□□ 0.47
TNFAIP3-202ENST00000420009 KDM5BQ9UGL1 1544 aa17.95■□□□□ 0.46
TNFAIP3-202ENST00000420009 MAP3K4Q9Y6R4 1608 aa17.94■□□□□ 0.46
TNFAIP3-202ENST00000420009 EPRSP07814 1512 aaKnown RBP17.93■□□□□ 0.46
TNFAIP3-202ENST00000420009 UGGT2Q9NYU1 1516 aa17.93■□□□□ 0.46
TNFAIP3-202ENST00000420009 ADGRL1O94910 1474 aa17.93■□□□□ 0.46
TNFAIP3-202ENST00000420009 COL17A1Q9UMD9 1497 aaPredicted RBP17.93■□□□□ 0.46
TNFAIP3-202ENST00000420009 KIAA0556O60303 1618 aa17.9■□□□□ 0.46
TNFAIP3-202ENST00000420009 ZCCHC11Q5TAX3 1644 aaKnown RBP17.9■□□□□ 0.46
TNFAIP3-202ENST00000420009 TEX14Q8IWB6 1497 aa17.88■□□□□ 0.45
TNFAIP3-202ENST00000420009 RAPGEF2Q9Y4G8 1499 aa17.88■□□□□ 0.45
TNFAIP3-202ENST00000420009 WDR7Q9Y4E6 1490 aa17.83■□□□□ 0.45
TNFAIP3-202ENST00000420009 ILDR1Q86SU0 546 aaPredicted RBP17.81■□□□□ 0.44
TNFAIP3-202ENST00000420009 HECW2Q9P2P5 1572 aa17.78■□□□□ 0.44
TNFAIP3-202ENST00000420009 CTTNBP2Q8WZ74 1663 aa17.76■□□□□ 0.43
TNFAIP3-202ENST00000420009 MAGI3Q5TCQ9 1506 aa17.76■□□□□ 0.43
TNFAIP3-202ENST00000420009 ABCA8O94911 1581 aa17.75■□□□□ 0.43
TNFAIP3-202ENST00000420009 CFAP43Q8NDM7 1665 aa17.74■□□□□ 0.43
TNFAIP3-202ENST00000420009 GOLGA3Q08378 1498 aa17.73■□□□□ 0.43
TNFAIP3-202ENST00000420009 CD109Q6YHK3 1445 aa17.72■□□□□ 0.43
TNFAIP3-202ENST00000420009 PRXQ9BXM0 1461 aa17.67■□□□□ 0.42
TNFAIP3-202ENST00000420009 KIF21BO75037 1637 aa17.63■□□□□ 0.41
TNFAIP3-202ENST00000420009 ARAP3Q8WWN8 1544 aa17.62■□□□□ 0.41
TNFAIP3-202ENST00000420009 KCNH8Q96L42 1107 aa17.62■□□□□ 0.41
TNFAIP3-202ENST00000420009 ATP10BO94823 1461 aa17.57■□□□□ 0.4
TNFAIP3-202ENST00000420009 ABCA9Q8IUA7 1624 aa17.57■□□□□ 0.4
TNFAIP3-202ENST00000420009 PHLDB1Q86UU1 1377 aa17.53■□□□□ 0.4
TNFAIP3-202ENST00000420009 SAMD9Q5K651 1589 aa17.53■□□□□ 0.4
TNFAIP3-202ENST00000420009 ADAMTSL3P82987 1691 aa17.52■□□□□ 0.39
TNFAIP3-202ENST00000420009 DMRT2Q9Y5R5 561 aa17.51■□□□□ 0.39
TNFAIP3-202ENST00000420009 ARID3CA6NKF2 412 aa17.5■□□□□ 0.39
TNFAIP3-202ENST00000420009 PTPRMP28827 1452 aa17.5■□□□□ 0.39
TNFAIP3-202ENST00000420009 NEO1Q92859 1461 aa17.5■□□□□ 0.39
TNFAIP3-202ENST00000420009 FRMPD1Q5SYB0 1578 aa17.49■□□□□ 0.39
TNFAIP3-202ENST00000420009 RAPGEF6Q8TEU7 1601 aa17.48■□□□□ 0.39
TNFAIP3-202ENST00000420009 P3H3Q8IVL6 736 aa17.47■□□□□ 0.39
TNFAIP3-202ENST00000420009 RAPGEF3O95398 923 aa17.45■□□□□ 0.38
TNFAIP3-202ENST00000420009 MAPK8IP2Q13387 824 aaPredicted RBP17.45■□□□□ 0.38
TNFAIP3-202ENST00000420009 FAM9AQ8IZU1 332 aaPredicted RBP17.45■□□□□ 0.38
TNFAIP3-202ENST00000420009 BCORL1Q5H9F3 1711 aa17.44■□□□□ 0.38
TNFAIP3-202ENST00000420009 NUP153P49790 1475 aaKnown RBP17.44■□□□□ 0.38
TNFAIP3-202ENST00000420009 ARHGEF40Q8TER5 1519 aa17.42■□□□□ 0.38
TNFAIP3-202ENST00000420009 MADDQ8WXG6 1647 aa17.42■□□□□ 0.38
TNFAIP3-202ENST00000420009 FBXO41Q8TF61 875 aa17.41■□□□□ 0.38
TNFAIP3-202ENST00000420009 PCF11O94913 1555 aaKnown RBP17.4■□□□□ 0.38
TNFAIP3-202ENST00000420009 LMTK3Q96Q04 1460 aa17.38■□□□□ 0.37
TNFAIP3-202ENST00000420009 CSRNP3Q8WYN3 585 aa17.38■□□□□ 0.37
TNFAIP3-202ENST00000420009 RICTORQ6R327 1708 aa17.37■□□□□ 0.37
TNFAIP3-202ENST00000420009 FHOD3Q2V2M9 1422 aa17.36■□□□□ 0.37
TNFAIP3-202ENST00000420009 DENND4BO75064 1496 aaPredicted RBP17.35■□□□□ 0.37
TNFAIP3-202ENST00000420009 ZMYM4Q5VZL5 1548 aa17.34■□□□□ 0.37
TNFAIP3-202ENST00000420009 CFAP74Q9C0B2 1584 aa17.34■□□□□ 0.37
TNFAIP3-202ENST00000420009 ARID4BQ4LE39 1312 aaPredicted RBP17.33■□□□□ 0.36
TNFAIP3-202ENST00000420009 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.33■□□□□ 0.36
TNFAIP3-202ENST00000420009 HNRNPUL2Q1KMD3 747 aaKnown RBP17.33■□□□□ 0.36
TNFAIP3-202ENST00000420009 RIMS1Q86UR5 1692 aaKnown RBP17.32■□□□□ 0.36
TNFAIP3-202ENST00000420009 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.32■□□□□ 0.36
TNFAIP3-202ENST00000420009 FANCAO15360 1455 aa17.32■□□□□ 0.36
TNFAIP3-202ENST00000420009 AKNAQ7Z591 1439 aa17.32■□□□□ 0.36
TNFAIP3-202ENST00000420009 EEA1Q15075 1411 aa17.31■□□□□ 0.36
TNFAIP3-202ENST00000420009 TTC37Q6PGP7 1564 aa17.31■□□□□ 0.36
TNFAIP3-202ENST00000420009 EFCAB5A4FU69 1503 aa17.29■□□□□ 0.36
TNFAIP3-202ENST00000420009 SIGLEC1Q9BZZ2 1709 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 445.4 ms