RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 KDM6BO15054 1643 aa19.5■□□□□ 0.71
RAPGEF1-205ENST00000419442 FAM69CQ0P6D2 419 aa19.49■□□□□ 0.71
RAPGEF1-205ENST00000419442 ERICH3Q5RHP9 1530 aa19.49■□□□□ 0.71
RAPGEF1-205ENST00000419442 WRNQ14191 1432 aaPredicted RBP eCLIP19.48■□□□□ 0.71
RAPGEF1-205ENST00000419442 BIVM-ERCC5R4GMW8 1640 aa19.45■□□□□ 0.7
RAPGEF1-205ENST00000419442 ADCY10Q96PN6 1610 aa19.43■□□□□ 0.7
RAPGEF1-205ENST00000419442 JPH4Q96JJ6 628 aa19.43■□□□□ 0.7
RAPGEF1-205ENST00000419442 RUSC2Q8N2Y8 1516 aa19.42■□□□□ 0.7
RAPGEF1-205ENST00000419442 TOP2BQ02880 1626 aa19.41■□□□□ 0.7
RAPGEF1-205ENST00000419442 TSPOAP1O95153 1857 aa19.39■□□□□ 0.69
RAPGEF1-205ENST00000419442 NPM1P06748 294 aaKnown RBP eCLIP19.37■□□□□ 0.69
RAPGEF1-205ENST00000419442 PPRC1Q5VV67 1664 aaKnown RBP19.27■□□□□ 0.67
RAPGEF1-205ENST00000419442 ADGRL1O94910 1474 aa19.26■□□□□ 0.67
RAPGEF1-205ENST00000419442 GLI2P10070 1586 aa19.22■□□□□ 0.67
RAPGEF1-205ENST00000419442 HECW2Q9P2P5 1572 aa19.22■□□□□ 0.67
RAPGEF1-205ENST00000419442 KIAA0586Q9BVV6 1533 aa19.21■□□□□ 0.67
RAPGEF1-205ENST00000419442 ABCC2Q92887 1545 aa19.14■□□□□ 0.65
RAPGEF1-205ENST00000419442 PLB1Q6P1J6 1458 aa19.12■□□□□ 0.65
RAPGEF1-205ENST00000419442 COL17A1Q9UMD9 1497 aaPredicted RBP19.12■□□□□ 0.65
RAPGEF1-205ENST00000419442 ASXL2Q76L83 1435 aa19.11■□□□□ 0.65
RAPGEF1-205ENST00000419442 PTPRGP23470 1445 aa19.1■□□□□ 0.65
RAPGEF1-205ENST00000419442 CUL7Q14999 1698 aa19.09■□□□□ 0.65
RAPGEF1-205ENST00000419442 MAP3K4Q9Y6R4 1608 aa19.08■□□□□ 0.65
RAPGEF1-205ENST00000419442 UHRF1BP1LA0JNW5 1464 aa19.07■□□□□ 0.64
RAPGEF1-205ENST00000419442 IGF1RP08069 1367 aa19.04■□□□□ 0.64
RAPGEF1-205ENST00000419442 TNIKQ9UKE5 1360 aa19.04■□□□□ 0.64
RAPGEF1-205ENST00000419442 EPRSP07814 1512 aaKnown RBP19.02■□□□□ 0.64
RAPGEF1-205ENST00000419442 TEX14Q8IWB6 1497 aa19.02■□□□□ 0.63
RAPGEF1-205ENST00000419442 CARMIL2Q6F5E8 1435 aa19■□□□□ 0.63
RAPGEF1-205ENST00000419442 KDM5BQ9UGL1 1544 aa18.98■□□□□ 0.63
RAPGEF1-205ENST00000419442 UACAQ9BZF9 1416 aa18.97■□□□□ 0.63
RAPGEF1-205ENST00000419442 FBXO41Q8TF61 875 aa18.96■□□□□ 0.63
RAPGEF1-205ENST00000419442 KIF27Q86VH2 1401 aa18.95■□□□□ 0.62
RAPGEF1-205ENST00000419442 IQGAP2Q13576 1575 aa18.94■□□□□ 0.62
RAPGEF1-205ENST00000419442 ZCCHC11Q5TAX3 1644 aaKnown RBP18.93■□□□□ 0.62
RAPGEF1-205ENST00000419442 DISP1Q96F81 1524 aa18.91■□□□□ 0.62
RAPGEF1-205ENST00000419442 SUPT5HO00267 1087 aaKnown RBP18.9■□□□□ 0.62
RAPGEF1-205ENST00000419442 TTBK1Q5TCY1 1321 aaPredicted RBP18.9■□□□□ 0.62
RAPGEF1-205ENST00000419442 CARMIL1Q5VZK9 1371 aa18.87■□□□□ 0.61
RAPGEF1-205ENST00000419442 MAGI3Q5TCQ9 1506 aa18.84■□□□□ 0.61
RAPGEF1-205ENST00000419442 CFAP43Q8NDM7 1665 aa18.84■□□□□ 0.61
RAPGEF1-205ENST00000419442 WDR7Q9Y4E6 1490 aa18.84■□□□□ 0.61
RAPGEF1-205ENST00000419442 UGGT2Q9NYU1 1516 aa18.83■□□□□ 0.6
RAPGEF1-205ENST00000419442 KIF21BO75037 1637 aa18.82■□□□□ 0.6
RAPGEF1-205ENST00000419442 KIAA0556O60303 1618 aa18.79■□□□□ 0.6
RAPGEF1-205ENST00000419442 ADAMTSL3P82987 1691 aa18.76■□□□□ 0.59
RAPGEF1-205ENST00000419442 CD109Q6YHK3 1445 aa18.75■□□□□ 0.59
RAPGEF1-205ENST00000419442 PTPRMP28827 1452 aa18.72■□□□□ 0.59
RAPGEF1-205ENST00000419442 ARAP3Q8WWN8 1544 aa18.72■□□□□ 0.59
RAPGEF1-205ENST00000419442 ABCA8O94911 1581 aa18.68■□□□□ 0.58
RAPGEF1-205ENST00000419442 PCF11O94913 1555 aaKnown RBP18.67■□□□□ 0.58
RAPGEF1-205ENST00000419442 RAPGEF2Q9Y4G8 1499 aa18.65■□□□□ 0.58
RAPGEF1-205ENST00000419442 LMTK3Q96Q04 1460 aa18.64■□□□□ 0.57
RAPGEF1-205ENST00000419442 BCORL1Q5H9F3 1711 aa18.63■□□□□ 0.57
RAPGEF1-205ENST00000419442 CTTNBP2Q8WZ74 1663 aa18.61■□□□□ 0.57
RAPGEF1-205ENST00000419442 KCNH8Q96L42 1107 aa18.6■□□□□ 0.57
RAPGEF1-205ENST00000419442 MADDQ8WXG6 1647 aa18.6■□□□□ 0.57
RAPGEF1-205ENST00000419442 PHLDB1Q86UU1 1377 aa18.59■□□□□ 0.57
RAPGEF1-205ENST00000419442 ABCA9Q8IUA7 1624 aa18.57■□□□□ 0.56
RAPGEF1-205ENST00000419442 GOLGA3Q08378 1498 aa18.57■□□□□ 0.56
RAPGEF1-205ENST00000419442 FRMPD1Q5SYB0 1578 aa18.54■□□□□ 0.56
RAPGEF1-205ENST00000419442 NEO1Q92859 1461 aa18.52■□□□□ 0.55
RAPGEF1-205ENST00000419442 RIMS1Q86UR5 1692 aaKnown RBP18.5■□□□□ 0.55
RAPGEF1-205ENST00000419442 ATP10BO94823 1461 aa18.47■□□□□ 0.55
RAPGEF1-205ENST00000419442 ARHGEF40Q8TER5 1519 aa18.47■□□□□ 0.55
RAPGEF1-205ENST00000419442 RAPGEF3O95398 923 aa18.46■□□□□ 0.55
RAPGEF1-205ENST00000419442 CERKQ8TCT0 537 aa18.45■□□□□ 0.54
RAPGEF1-205ENST00000419442 SOCS7O14512 581 aa18.44■□□□□ 0.54
RAPGEF1-205ENST00000419442 ILDR2Q71H61 639 aa18.42■□□□□ 0.54
RAPGEF1-205ENST00000419442 RICTORQ6R327 1708 aa18.42■□□□□ 0.54
RAPGEF1-205ENST00000419442 HSPA2P54652 639 aa18.41■□□□□ 0.54
RAPGEF1-205ENST00000419442 ARID4BQ4LE39 1312 aaPredicted RBP18.4■□□□□ 0.54
RAPGEF1-205ENST00000419442 DISP3Q9P2K9 1392 aa18.37■□□□□ 0.53
RAPGEF1-205ENST00000419442 SIGLEC1Q9BZZ2 1709 aa18.37■□□□□ 0.53
RAPGEF1-205ENST00000419442 ZMYM4Q5VZL5 1548 aa18.35■□□□□ 0.53
RAPGEF1-205ENST00000419442 FHOD3Q2V2M9 1422 aa18.35■□□□□ 0.53
RAPGEF1-205ENST00000419442 TTC37Q6PGP7 1564 aa18.34■□□□□ 0.53
RAPGEF1-205ENST00000419442 PRXQ9BXM0 1461 aa18.34■□□□□ 0.53
RAPGEF1-205ENST00000419442 FANCAO15360 1455 aa18.33■□□□□ 0.53
RAPGEF1-205ENST00000419442 DENND4BO75064 1496 aaPredicted RBP18.33■□□□□ 0.53
RAPGEF1-205ENST00000419442 RAPGEF6Q8TEU7 1601 aa18.33■□□□□ 0.52
RAPGEF1-205ENST00000419442 POGZQ7Z3K3 1410 aa18.32■□□□□ 0.52
RAPGEF1-205ENST00000419442 FER1L4A9Z1Z3 1794 aa18.32■□□□□ 0.52
RAPGEF1-205ENST00000419442 ARID3CA6NKF2 412 aa18.32■□□□□ 0.52
RAPGEF1-205ENST00000419442 AKNAQ7Z591 1439 aa18.31■□□□□ 0.52
RAPGEF1-205ENST00000419442 SAMD9Q5K651 1589 aa18.3■□□□□ 0.52
RAPGEF1-205ENST00000419442 CFAP74Q9C0B2 1584 aa18.3■□□□□ 0.52
RAPGEF1-205ENST00000419442 SPATA31D1Q6ZQQ2 1576 aa18.3■□□□□ 0.52
RAPGEF1-205ENST00000419442 EFCAB5A4FU69 1503 aa18.29■□□□□ 0.52
RAPGEF1-205ENST00000419442 PREX1Q8TCU6 1659 aa18.29■□□□□ 0.52
RAPGEF1-205ENST00000419442 ZFYVE16Q7Z3T8 1539 aa18.28■□□□□ 0.52
RAPGEF1-205ENST00000419442 FAM9AQ8IZU1 332 aaPredicted RBP18.28■□□□□ 0.52
RAPGEF1-205ENST00000419442 STRCQ7RTU9 1775 aa18.27■□□□□ 0.52
RAPGEF1-205ENST00000419442 MAGI2Q86UL8 1455 aa18.26■□□□□ 0.51
RAPGEF1-205ENST00000419442 YEATS2Q9ULM3 1422 aa18.25■□□□□ 0.51
RAPGEF1-205ENST00000419442 NUP153P49790 1475 aaKnown RBP18.25■□□□□ 0.51
RAPGEF1-205ENST00000419442 ARHGEF12Q9NZN5 1544 aa18.24■□□□□ 0.51
RAPGEF1-205ENST00000419442 P3H3Q8IVL6 736 aa18.22■□□□□ 0.51
RAPGEF1-205ENST00000419442 HECW1Q76N89 1606 aa18.22■□□□□ 0.51
RAPGEF1-205ENST00000419442 PLPPR3Q6T4P5 718 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms