RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 IGF1RP08069 1367 aa22.49■■□□□ 1.19
TMEM248-203ENST00000418375 PRG4Q92954 1404 aaPredicted RBP22.48■■□□□ 1.19
TMEM248-203ENST00000418375 RUSC2Q8N2Y8 1516 aa22.41■■□□□ 1.18
TMEM248-203ENST00000418375 CUL7Q14999 1698 aa22.38■■□□□ 1.17
TMEM248-203ENST00000418375 CARMIL1Q5VZK9 1371 aa22.37■■□□□ 1.17
TMEM248-203ENST00000418375 KIAA0586Q9BVV6 1533 aa22.36■■□□□ 1.17
TMEM248-203ENST00000418375 EEA1Q15075 1411 aa22.27■■□□□ 1.16
TMEM248-203ENST00000418375 RAPGEF2Q9Y4G8 1499 aa22.23■■□□□ 1.15
TMEM248-203ENST00000418375 NPM1P06748 294 aaKnown RBP eCLIP22.23■■□□□ 1.15
TMEM248-203ENST00000418375 CSRNP3Q8WYN3 585 aa22.22■■□□□ 1.15
TMEM248-203ENST00000418375 PRXQ9BXM0 1461 aa22.17■■□□□ 1.14
TMEM248-203ENST00000418375 FAM9AQ8IZU1 332 aaPredicted RBP22.16■■□□□ 1.14
TMEM248-203ENST00000418375 CARMIL2Q6F5E8 1435 aa22.15■■□□□ 1.14
TMEM248-203ENST00000418375 PTPRGP23470 1445 aa22.14■■□□□ 1.14
TMEM248-203ENST00000418375 ADCY10Q96PN6 1610 aa22.14■■□□□ 1.14
TMEM248-203ENST00000418375 IQGAP2Q13576 1575 aa22.13■■□□□ 1.13
TMEM248-203ENST00000418375 TTBK1Q5TCY1 1321 aaPredicted RBP22.12■■□□□ 1.13
TMEM248-203ENST00000418375 TNIKQ9UKE5 1360 aa22.12■■□□□ 1.13
TMEM248-203ENST00000418375 MAPKBP1O60336 1514 aa22.11■■□□□ 1.13
TMEM248-203ENST00000418375 FAM69CQ0P6D2 419 aa22.11■■□□□ 1.13
TMEM248-203ENST00000418375 ABCC10Q5T3U5 1492 aa22.1■■□□□ 1.13
TMEM248-203ENST00000418375 KIF13AQ9H1H9 1805 aa22.08■■□□□ 1.12
TMEM248-203ENST00000418375 DISP1Q96F81 1524 aa22.03■■□□□ 1.12
TMEM248-203ENST00000418375 DIP2BQ9P265 1576 aa22.01■■□□□ 1.11
TMEM248-203ENST00000418375 UGGT2Q9NYU1 1516 aa22.01■■□□□ 1.11
TMEM248-203ENST00000418375 ABCC2Q92887 1545 aa21.99■■□□□ 1.11
TMEM248-203ENST00000418375 UACAQ9BZF9 1416 aa21.97■■□□□ 1.11
TMEM248-203ENST00000418375 UHRF1BP1LA0JNW5 1464 aa21.96■■□□□ 1.11
TMEM248-203ENST00000418375 KIF21BO75037 1637 aa21.96■■□□□ 1.11
TMEM248-203ENST00000418375 CTTNBP2Q8WZ74 1663 aa21.93■■□□□ 1.1
TMEM248-203ENST00000418375 KIAA0556O60303 1618 aa21.92■■□□□ 1.1
TMEM248-203ENST00000418375 ASXL2Q76L83 1435 aa21.91■■□□□ 1.1
TMEM248-203ENST00000418375 PLB1Q6P1J6 1458 aa21.9■■□□□ 1.1
TMEM248-203ENST00000418375 GOLGA3Q08378 1498 aa21.88■■□□□ 1.09
TMEM248-203ENST00000418375 KDM5BQ9UGL1 1544 aa21.85■■□□□ 1.09
TMEM248-203ENST00000418375 UBTFP17480 764 aaKnown RBP21.85■■□□□ 1.09
TMEM248-203ENST00000418375 EHMT2Q96KQ7 1210 aa21.85■■□□□ 1.09
TMEM248-203ENST00000418375 GLI2P10070 1586 aa21.8■■□□□ 1.08
TMEM248-203ENST00000418375 KDM6BO15054 1643 aa21.8■■□□□ 1.08
TMEM248-203ENST00000418375 TSPOAP1O95153 1857 aa21.79■■□□□ 1.08
TMEM248-203ENST00000418375 ZCCHC11Q5TAX3 1644 aaKnown RBP21.77■■□□□ 1.08
TMEM248-203ENST00000418375 EPRSP07814 1512 aaKnown RBP21.77■■□□□ 1.08
TMEM248-203ENST00000418375 RANGAP1P46060 587 aaPredicted RBP21.75■■□□□ 1.07
TMEM248-203ENST00000418375 ABCA8O94911 1581 aa21.72■■□□□ 1.07
TMEM248-203ENST00000418375 WDR7Q9Y4E6 1490 aa21.71■■□□□ 1.07
TMEM248-203ENST00000418375 P3H3Q8IVL6 736 aa21.71■■□□□ 1.07
TMEM248-203ENST00000418375 SAMD9Q5K651 1589 aa21.69■■□□□ 1.06
TMEM248-203ENST00000418375 PPRC1Q5VV67 1664 aaKnown RBP21.69■■□□□ 1.06
TMEM248-203ENST00000418375 MAP3K4Q9Y6R4 1608 aa21.66■■□□□ 1.06
TMEM248-203ENST00000418375 EFCAB5A4FU69 1503 aa21.65■■□□□ 1.06
TMEM248-203ENST00000418375 TEX14Q8IWB6 1497 aa21.65■■□□□ 1.06
TMEM248-203ENST00000418375 KCNH8Q96L42 1107 aa21.64■■□□□ 1.05
TMEM248-203ENST00000418375 FHOD3Q2V2M9 1422 aa21.61■■□□□ 1.05
TMEM248-203ENST00000418375 ARID3CA6NKF2 412 aa21.6■■□□□ 1.05
TMEM248-203ENST00000418375 COL17A1Q9UMD9 1497 aaPredicted RBP21.59■■□□□ 1.05
TMEM248-203ENST00000418375 CD109Q6YHK3 1445 aa21.58■■□□□ 1.05
TMEM248-203ENST00000418375 KDM4FA0A1W2PPD8 638 aa21.57■■□□□ 1.04
TMEM248-203ENST00000418375 ATP10BO94823 1461 aa21.57■■□□□ 1.04
TMEM248-203ENST00000418375 ARHGAP35Q9NRY4 1499 aa21.55■■□□□ 1.04
TMEM248-203ENST00000418375 MAGI3Q5TCQ9 1506 aa21.55■■□□□ 1.04
TMEM248-203ENST00000418375 CFAP43Q8NDM7 1665 aa21.52■■□□□ 1.04
TMEM248-203ENST00000418375 LOC105371045A0A1W2PR82 267 aa21.5■■□□□ 1.03
TMEM248-203ENST00000418375 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.5■■□□□ 1.03
TMEM248-203ENST00000418375 HNRNPUL2Q1KMD3 747 aaKnown RBP21.5■■□□□ 1.03
TMEM248-203ENST00000418375 RAPGEF6Q8TEU7 1601 aa21.5■■□□□ 1.03
TMEM248-203ENST00000418375 CLIP1P30622 1438 aa21.49■■□□□ 1.03
TMEM248-203ENST00000418375 FMN1Q68DA7 1419 aa21.48■■□□□ 1.03
TMEM248-203ENST00000418375 NUP153P49790 1475 aaKnown RBP21.45■■□□□ 1.03
TMEM248-203ENST00000418375 ADGRL1O94910 1474 aa21.41■■□□□ 1.02
TMEM248-203ENST00000418375 CEP162Q5TB80 1403 aa21.41■■□□□ 1.02
TMEM248-203ENST00000418375 ABCA9Q8IUA7 1624 aa21.39■■□□□ 1.01
TMEM248-203ENST00000418375 PLEKHD1A6NEE1 506 aa21.38■■□□□ 1.01
TMEM248-203ENST00000418375 ATP1B4Q9UN42 357 aaPredicted RBP21.38■■□□□ 1.01
TMEM248-203ENST00000418375 PHLDB1Q86UU1 1377 aa21.37■■□□□ 1.01
TMEM248-203ENST00000418375 ARAP3Q8WWN8 1544 aa21.37■■□□□ 1.01
TMEM248-203ENST00000418375 HECW1Q76N89 1606 aa21.33■■□□□ 1
TMEM248-203ENST00000418375 NEO1Q92859 1461 aa21.32■■□□□ 1
TMEM248-203ENST00000418375 CASKIN1Q8WXD9 1431 aa21.31■■□□□ 1
TMEM248-203ENST00000418375 RAPGEF3O95398 923 aa21.28■■□□□ 1
TMEM248-203ENST00000418375 FYCO1Q9BQS8 1478 aa21.26■□□□□ 0.99
TMEM248-203ENST00000418375 CDK13Q14004 1512 aaKnown RBP21.26■□□□□ 0.99
TMEM248-203ENST00000418375 CDK11AQ9UQ88 783 aaPredicted RBP21.26■□□□□ 0.99
TMEM248-203ENST00000418375 PCF11O94913 1555 aaKnown RBP21.26■□□□□ 0.99
TMEM248-203ENST00000418375 CCDC18Q5T9S5 1454 aa21.22■□□□□ 0.99
TMEM248-203ENST00000418375 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.22■□□□□ 0.99
TMEM248-203ENST00000418375 FANCAO15360 1455 aa21.2■□□□□ 0.98
TMEM248-203ENST00000418375 AKNAQ7Z591 1439 aa21.19■□□□□ 0.98
TMEM248-203ENST00000418375 DENND4BO75064 1496 aaPredicted RBP21.17■□□□□ 0.98
TMEM248-203ENST00000418375 TTC37Q6PGP7 1564 aa21.17■□□□□ 0.98
TMEM248-203ENST00000418375 FRMPD1Q5SYB0 1578 aa21.16■□□□□ 0.98
TMEM248-203ENST00000418375 VPS8Q8N3P4 1428 aa21.16■□□□□ 0.98
TMEM248-203ENST00000418375 CFAP74Q9C0B2 1584 aa21.14■□□□□ 0.98
TMEM248-203ENST00000418375 TROQ12816 1431 aaPredicted RBP21.13■□□□□ 0.97
TMEM248-203ENST00000418375 SENP3Q9H4L4 574 aaPredicted RBP21.13■□□□□ 0.97
TMEM248-203ENST00000418375 PLCH2O75038 1416 aa21.12■□□□□ 0.97
TMEM248-203ENST00000418375 LRRIQ1Q96JM4 1722 aa21.11■□□□□ 0.97
TMEM248-203ENST00000418375 ARID4BQ4LE39 1312 aaPredicted RBP21.1■□□□□ 0.97
TMEM248-203ENST00000418375 EFCAB2Q5VUJ9 269 aa21.07■□□□□ 0.96
TMEM248-203ENST00000418375 RICTORQ6R327 1708 aa21.07■□□□□ 0.96
TMEM248-203ENST00000418375 SCAPERQ9BY12 1400 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms