RNA–Protein interactions for RNA: ENST00000418359.7

CNOT2-202, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT2, Length 3,152 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-202ENST00000418359 RRBP1Q9P2E9 1410 aaKnown RBP16.11■□□□□ 0.17
CNOT2-202ENST00000418359 CCER2I3L3R5 266 aa16.11■□□□□ 0.17
CNOT2-202ENST00000418359 MAPKBP1O60336 1514 aa16.1■□□□□ 0.17
CNOT2-202ENST00000418359 B4GALNT3Q6L9W6 998 aa16.08■□□□□ 0.16
CNOT2-202ENST00000418359 ATP1B4Q9UN42 357 aaPredicted RBP16.08■□□□□ 0.16
CNOT2-202ENST00000418359 ANO8Q9HCE9 1232 aaPredicted RBP16.07■□□□□ 0.16
CNOT2-202ENST00000418359 SETD5Q9C0A6 1442 aa16.01■□□□□ 0.15
CNOT2-202ENST00000418359 PAK3O75914 559 aaPredicted RBP16.01■□□□□ 0.15
CNOT2-202ENST00000418359 CUX2O14529 1486 aa16■□□□□ 0.15
CNOT2-202ENST00000418359 RTN4Q9NQC3 1192 aaKnown RBP15.97■□□□□ 0.15
CNOT2-202ENST00000418359 PPP4R2Q9NY27 417 aa15.97■□□□□ 0.15
CNOT2-202ENST00000418359 NOP58Q9Y2X3 529 aaKnown RBP15.97■□□□□ 0.15
CNOT2-202ENST00000418359 CNGB1Q14028 1251 aaPredicted RBP15.96■□□□□ 0.15
CNOT2-202ENST00000418359 FAM9BQ8IZU0 186 aa15.95■□□□□ 0.14
CNOT2-202ENST00000418359 MYT1LQ9UL68 1186 aa15.95■□□□□ 0.14
CNOT2-202ENST00000418359 P3H3Q8IVL6 736 aa15.94■□□□□ 0.14
CNOT2-202ENST00000418359 CCDC136Q96JN2 1154 aa15.94■□□□□ 0.14
CNOT2-202ENST00000418359 TONSLQ96HA7 1378 aa15.94■□□□□ 0.14
CNOT2-202ENST00000418359 SENP3-EIF4A1A0A087X0R7 540 aa15.93■□□□□ 0.14
CNOT2-202ENST00000418359 SALL2Q9Y467 1007 aaPredicted RBP15.93■□□□□ 0.14
CNOT2-202ENST00000418359 CCDC184Q52MB2 194 aa15.93■□□□□ 0.14
CNOT2-202ENST00000418359 PHLDB1Q86UU1 1377 aa15.9■□□□□ 0.14
CNOT2-202ENST00000418359 PRXQ9BXM0 1461 aa15.89■□□□□ 0.14
CNOT2-202ENST00000418359 RTL5Q5HYW3 569 aaPredicted RBP15.89■□□□□ 0.13
CNOT2-202ENST00000418359 ARHGAP35Q9NRY4 1499 aa15.88■□□□□ 0.13
CNOT2-202ENST00000418359 IL27Q8NEV9 243 aa15.87■□□□□ 0.13
CNOT2-202ENST00000418359 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.85■□□□□ 0.13
CNOT2-202ENST00000418359 ERICH3Q5RHP9 1530 aa15.83■□□□□ 0.12
CNOT2-202ENST00000418359 TIMELESSQ9UNS1 1208 aa15.83■□□□□ 0.12
CNOT2-202ENST00000418359 NPM2Q86SE8 214 aaKnown RBP15.82■□□□□ 0.12
CNOT2-202ENST00000418359 MRS2Q9HD23 443 aa15.82■□□□□ 0.12
CNOT2-202ENST00000418359 ANP32AP39687 249 aaKnown RBP15.81■□□□□ 0.12
CNOT2-202ENST00000418359 ZBTB47Q9UFB7 747 aaPredicted RBP15.79■□□□□ 0.12
CNOT2-202ENST00000418359 HSPA5P11021 654 aaKnown RBP15.79■□□□□ 0.12
CNOT2-202ENST00000418359 WASHC2AQ641Q2 1341 aa15.79■□□□□ 0.12
CNOT2-202ENST00000418359 TOP2BQ02880 1626 aa15.79■□□□□ 0.12
CNOT2-202ENST00000418359 ERICH6BQ5W0A0 696 aa15.77■□□□□ 0.12
CNOT2-202ENST00000418359 KIF27Q86VH2 1401 aa15.77■□□□□ 0.12
CNOT2-202ENST00000418359 LAS1LQ9Y4W2 734 aaKnown RBP15.76■□□□□ 0.11
CNOT2-202ENST00000418359 IPO9Q96P70 1041 aaKnown RBP15.75■□□□□ 0.11
CNOT2-202ENST00000418359 LRRC9Q6ZRR7 1453 aa15.75■□□□□ 0.11
CNOT2-202ENST00000418359 TIAM1Q13009 1591 aa15.74■□□□□ 0.11
CNOT2-202ENST00000418359 UNC13AQ9UPW8 1703 aa15.72■□□□□ 0.11
CNOT2-202ENST00000418359 ATAD2BQ9ULI0 1458 aa15.72■□□□□ 0.11
CNOT2-202ENST00000418359 POLR3GLQ9BT43 218 aa15.72■□□□□ 0.11
CNOT2-202ENST00000418359 AKNAQ7Z591 1439 aa15.7■□□□□ 0.1
CNOT2-202ENST00000418359 PRKRIP1Q9H875 184 aaPredicted RBP15.69■□□□□ 0.1
CNOT2-202ENST00000418359 C11orf95C9JLR9 678 aaPredicted RBP15.69■□□□□ 0.1
CNOT2-202ENST00000418359 EIF4G2P78344 907 aaKnown RBP eCLIP15.68■□□□□ 0.1
CNOT2-202ENST00000418359 ZBED9Q6R2W3 1325 aa15.67■□□□□ 0.1
CNOT2-202ENST00000418359 NEFMP07197 916 aa15.66■□□□□ 0.1
CNOT2-202ENST00000418359 CHIC2Q9UKJ5 165 aa15.66■□□□□ 0.1
CNOT2-202ENST00000418359 CCDC18Q5T9S5 1454 aa15.65■□□□□ 0.1
CNOT2-202ENST00000418359 RRP7BPQ9NSQ0 103 aa15.64■□□□□ 0.09
CNOT2-202ENST00000418359 CUX1P39880 1505 aa15.64■□□□□ 0.09
CNOT2-202ENST00000418359 FOXD1Q16676 465 aa15.63■□□□□ 0.09
CNOT2-202ENST00000418359 FHAD1B1AJZ9 1412 aa15.63■□□□□ 0.09
CNOT2-202ENST00000418359 BIVM-ERCC5R4GMW8 1640 aa15.62■□□□□ 0.09
CNOT2-202ENST00000418359 PEG3Q9GZU2 1588 aa15.61■□□□□ 0.09
CNOT2-202ENST00000418359 EIF5BO60841 1220 aaKnown RBP15.61■□□□□ 0.09
CNOT2-202ENST00000418359 CNTLNQ9NXG0 1405 aa15.61■□□□□ 0.09
CNOT2-202ENST00000418359 FHOD3Q2V2M9 1422 aa15.6■□□□□ 0.09
CNOT2-202ENST00000418359 AQRO60306 1485 aaKnown RBP eCLIP15.6■□□□□ 0.09
CNOT2-202ENST00000418359 IGF1RP08069 1367 aa15.58■□□□□ 0.08
CNOT2-202ENST00000418359 PTPRKQ15262 1439 aa15.58■□□□□ 0.08
CNOT2-202ENST00000418359 CARMIL1Q5VZK9 1371 aa15.57■□□□□ 0.08
CNOT2-202ENST00000418359 BRPF3Q9ULD4 1205 aa15.57■□□□□ 0.08
CNOT2-202ENST00000418359 UACAQ9BZF9 1416 aa15.57■□□□□ 0.08
CNOT2-202ENST00000418359 L3MBTL2Q969R5 705 aa15.56■□□□□ 0.08
CNOT2-202ENST00000418359 NUDCQ9Y266 331 aa15.56■□□□□ 0.08
CNOT2-202ENST00000418359 BICRAQ9NZM4 1560 aa15.56■□□□□ 0.08
CNOT2-202ENST00000418359 PCF11O94913 1555 aaKnown RBP15.55■□□□□ 0.08
CNOT2-202ENST00000418359 CCDC7Q96M83 1385 aa15.55■□□□□ 0.08
CNOT2-202ENST00000418359 MAP3K1Q13233 1512 aa15.53■□□□□ 0.08
CNOT2-202ENST00000418359 FGD6Q6ZV73 1430 aa15.53■□□□□ 0.08
CNOT2-202ENST00000418359 MTUS2Q5JR59 1369 aa15.52■□□□□ 0.08
CNOT2-202ENST00000418359 SKAP1Q86WV1 359 aa15.52■□□□□ 0.07
CNOT2-202ENST00000418359 ZNF326Q5BKZ1 582 aaKnown RBP15.5■□□□□ 0.07
CNOT2-202ENST00000418359 KIF7Q2M1P5 1343 aa15.5■□□□□ 0.07
CNOT2-202ENST00000418359 EXOC6Q8TAG9 804 aa15.5■□□□□ 0.07
CNOT2-202ENST00000418359 KDM5BQ9UGL1 1544 aa15.49■□□□□ 0.07
CNOT2-202ENST00000418359 HFM1A2PYH4 1435 aa15.49■□□□□ 0.07
CNOT2-202ENST00000418359 NAIPQ13075 1403 aa15.49■□□□□ 0.07
CNOT2-202ENST00000418359 PDE4AP27815 886 aa15.48■□□□□ 0.07
CNOT2-202ENST00000418359 SLC4A3P48751 1232 aa15.48■□□□□ 0.07
CNOT2-202ENST00000418359 SMG6Q86US8 1419 aaKnown RBP15.48■□□□□ 0.07
CNOT2-202ENST00000418359 NBPF8Q3BBV2 869 aa15.48■□□□□ 0.07
CNOT2-202ENST00000418359 NCOA2Q15596 1464 aa15.47■□□□□ 0.07
CNOT2-202ENST00000418359 PTPN23Q9H3S7 1636 aa15.45■□□□□ 0.06
CNOT2-202ENST00000418359 FMN1Q68DA7 1419 aa15.45■□□□□ 0.06
CNOT2-202ENST00000418359 ARID3CA6NKF2 412 aa15.45■□□□□ 0.06
CNOT2-202ENST00000418359 NCOA1Q15788 1441 aa15.44■□□□□ 0.06
CNOT2-202ENST00000418359 TMC1Q8TDI8 760 aa15.44■□□□□ 0.06
CNOT2-202ENST00000418359 MPHOSPH9Q99550 1183 aa15.43■□□□□ 0.06
CNOT2-202ENST00000418359 CFAP43Q8NDM7 1665 aa15.42■□□□□ 0.06
CNOT2-202ENST00000418359 PPM1GO15355 546 aaPredicted RBP15.41■□□□□ 0.06
CNOT2-202ENST00000418359 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.4■□□□□ 0.063e-6■■□□□ 12.8
CNOT2-202ENST00000418359 RNF123Q5XPI4 1314 aa15.4■□□□□ 0.06
CNOT2-202ENST00000418359 TCERG1O14776 1098 aaKnown RBP15.39■□□□□ 0.05
CNOT2-202ENST00000418359 USP35Q9P2H5 1018 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms