RNA–Protein interactions for RNA: ENST00000417437.6

VNN3-205, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-205ENST00000417437 ADAMTS12P58397 1594 aa11.2□□□□□ -0.62
VNN3-205ENST00000417437 WRNQ14191 1432 aaPredicted RBP eCLIP11.2□□□□□ -0.62
VNN3-205ENST00000417437 FHAD1B1AJZ9 1412 aa11.18□□□□□ -0.62
VNN3-205ENST00000417437 NUP160Q12769 1436 aa11.18□□□□□ -0.62
VNN3-205ENST00000417437 PRG4Q92954 1404 aaPredicted RBP11.18□□□□□ -0.62
VNN3-205ENST00000417437 SHROOM2Q13796 1616 aa11.18□□□□□ -0.62
VNN3-205ENST00000417437 ADRA2BP18089 450 aa11.17□□□□□ -0.62
VNN3-205ENST00000417437 JPH4Q96JJ6 628 aa11.16□□□□□ -0.62
VNN3-205ENST00000417437 TSPOAP1O95153 1857 aa11.16□□□□□ -0.62
VNN3-205ENST00000417437 KDM6BO15054 1643 aa11.13□□□□□ -0.63
VNN3-205ENST00000417437 ABCC10Q5T3U5 1492 aa11.12□□□□□ -0.63
VNN3-205ENST00000417437 ERICH3Q5RHP9 1530 aa11.12□□□□□ -0.63
VNN3-205ENST00000417437 ILDR1Q86SU0 546 aaPredicted RBP11.11□□□□□ -0.63
VNN3-205ENST00000417437 TTBK1Q5TCY1 1321 aaPredicted RBP11.09□□□□□ -0.63
VNN3-205ENST00000417437 TOP2BQ02880 1626 aa11.09□□□□□ -0.63
VNN3-205ENST00000417437 BIVM-ERCC5R4GMW8 1640 aa11.09□□□□□ -0.63
VNN3-205ENST00000417437 KDM4FA0A1W2PPD8 638 aa11.09□□□□□ -0.63
VNN3-205ENST00000417437 DIP2BQ9P265 1576 aa11.08□□□□□ -0.64
VNN3-205ENST00000417437 MAPKBP1O60336 1514 aa11.08□□□□□ -0.64
VNN3-205ENST00000417437 PLPPR3Q6T4P5 718 aa11.07□□□□□ -0.64
VNN3-205ENST00000417437 ADCY10Q96PN6 1610 aa11.06□□□□□ -0.64
VNN3-205ENST00000417437 RUSC2Q8N2Y8 1516 aa11.04□□□□□ -0.64
VNN3-205ENST00000417437 HRCP23327 699 aa11.01□□□□□ -0.65
VNN3-205ENST00000417437 PTPRGP23470 1445 aa10.99□□□□□ -0.65
VNN3-205ENST00000417437 KIAA0586Q9BVV6 1533 aa10.98□□□□□ -0.65
VNN3-205ENST00000417437 ADGRL1O94910 1474 aa10.97□□□□□ -0.65
VNN3-205ENST00000417437 CARMIL2Q6F5E8 1435 aa10.96□□□□□ -0.65
VNN3-205ENST00000417437 CUL7Q14999 1698 aa10.94□□□□□ -0.66
VNN3-205ENST00000417437 PLB1Q6P1J6 1458 aa10.93□□□□□ -0.66
VNN3-205ENST00000417437 ASXL2Q76L83 1435 aa10.92□□□□□ -0.66
VNN3-205ENST00000417437 KIF27Q86VH2 1401 aa10.92□□□□□ -0.66
VNN3-205ENST00000417437 TNIKQ9UKE5 1360 aa10.92□□□□□ -0.66
VNN3-205ENST00000417437 ABCC2Q92887 1545 aa10.92□□□□□ -0.66
VNN3-205ENST00000417437 PCGF6Q9BYE7 350 aa10.91□□□□□ -0.66
VNN3-205ENST00000417437 HECW2Q9P2P5 1572 aa10.9□□□□□ -0.66
VNN3-205ENST00000417437 GLI2P10070 1586 aa10.9□□□□□ -0.67
VNN3-205ENST00000417437 IGF1RP08069 1367 aa10.9□□□□□ -0.67
VNN3-205ENST00000417437 PPRC1Q5VV67 1664 aaKnown RBP10.89□□□□□ -0.67
VNN3-205ENST00000417437 TEX14Q8IWB6 1497 aa10.89□□□□□ -0.67
VNN3-205ENST00000417437 CARMIL1Q5VZK9 1371 aa10.87□□□□□ -0.67
VNN3-205ENST00000417437 UACAQ9BZF9 1416 aa10.86□□□□□ -0.67
VNN3-205ENST00000417437 IQGAP2Q13576 1575 aa10.86□□□□□ -0.67
VNN3-205ENST00000417437 MAP3K4Q9Y6R4 1608 aa10.84□□□□□ -0.67
VNN3-205ENST00000417437 UHRF1BP1LA0JNW5 1464 aa10.84□□□□□ -0.67
VNN3-205ENST00000417437 EPRSP07814 1512 aaKnown RBP10.84□□□□□ -0.67
VNN3-205ENST00000417437 LOC105371045A0A1W2PR82 267 aa10.83□□□□□ -0.68
VNN3-205ENST00000417437 COL17A1Q9UMD9 1497 aaPredicted RBP10.82□□□□□ -0.68
VNN3-205ENST00000417437 ZCCHC11Q5TAX3 1644 aaKnown RBP10.82□□□□□ -0.68
VNN3-205ENST00000417437 FBXO41Q8TF61 875 aa10.81□□□□□ -0.68
VNN3-205ENST00000417437 KCNH8Q96L42 1107 aa10.81□□□□□ -0.68
VNN3-205ENST00000417437 FAM9AQ8IZU1 332 aaPredicted RBP10.8□□□□□ -0.68
VNN3-205ENST00000417437 KDM5BQ9UGL1 1544 aa10.79□□□□□ -0.68
VNN3-205ENST00000417437 CD109Q6YHK3 1445 aa10.77□□□□□ -0.68
VNN3-205ENST00000417437 WDR7Q9Y4E6 1490 aa10.77□□□□□ -0.69
VNN3-205ENST00000417437 TRIM26Q12899 539 aaPredicted RBP10.77□□□□□ -0.69
VNN3-205ENST00000417437 DISP1Q96F81 1524 aa10.77□□□□□ -0.69
VNN3-205ENST00000417437 CFAP43Q8NDM7 1665 aa10.76□□□□□ -0.69
VNN3-205ENST00000417437 KIF21BO75037 1637 aa10.75□□□□□ -0.69
VNN3-205ENST00000417437 KIAA0556O60303 1618 aa10.74□□□□□ -0.69
VNN3-205ENST00000417437 UGGT2Q9NYU1 1516 aa10.74□□□□□ -0.69
VNN3-205ENST00000417437 RAPGEF2Q9Y4G8 1499 aa10.73□□□□□ -0.69
VNN3-205ENST00000417437 ARID4BQ4LE39 1312 aaPredicted RBP10.72□□□□□ -0.69
VNN3-205ENST00000417437 MAGI3Q5TCQ9 1506 aa10.72□□□□□ -0.69
VNN3-205ENST00000417437 GOLGA3Q08378 1498 aa10.7□□□□□ -0.7
VNN3-205ENST00000417437 ARID3CA6NKF2 412 aa10.7□□□□□ -0.7
VNN3-205ENST00000417437 CTTNBP2Q8WZ74 1663 aa10.69□□□□□ -0.7
VNN3-205ENST00000417437 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.67□□□□□ -0.7
VNN3-205ENST00000417437 HNRNPUL2Q1KMD3 747 aaKnown RBP10.67□□□□□ -0.7
VNN3-205ENST00000417437 ZEB1P37275 1124 aaPredicted RBP10.66□□□□□ -0.7
VNN3-205ENST00000417437 PPARGC1BQ86YN6 1023 aaKnown RBP10.66□□□□□ -0.7
VNN3-205ENST00000417437 PTPRMP28827 1452 aa10.66□□□□□ -0.7
VNN3-205ENST00000417437 ARAP3Q8WWN8 1544 aa10.64□□□□□ -0.71
VNN3-205ENST00000417437 ABCA8O94911 1581 aa10.64□□□□□ -0.71
VNN3-205ENST00000417437 RAPGEF3O95398 923 aa10.63□□□□□ -0.71
VNN3-205ENST00000417437 P3H3Q8IVL6 736 aa10.63□□□□□ -0.71
VNN3-205ENST00000417437 PHLDB1Q86UU1 1377 aa10.63□□□□□ -0.71
VNN3-205ENST00000417437 ADAMTSL3P82987 1691 aa10.63□□□□□ -0.71
VNN3-205ENST00000417437 LMTK3Q96Q04 1460 aa10.62□□□□□ -0.71
VNN3-205ENST00000417437 PCF11O94913 1555 aaKnown RBP10.61□□□□□ -0.71
VNN3-205ENST00000417437 MADDQ8WXG6 1647 aa10.6□□□□□ -0.71
VNN3-205ENST00000417437 BCORL1Q5H9F3 1711 aa10.6□□□□□ -0.71
VNN3-205ENST00000417437 RIMS1Q86UR5 1692 aaKnown RBP10.6□□□□□ -0.71
VNN3-205ENST00000417437 HSPA2P54652 639 aa10.58□□□□□ -0.72
VNN3-205ENST00000417437 ABCA9Q8IUA7 1624 aa10.58□□□□□ -0.72
VNN3-205ENST00000417437 ATP10BO94823 1461 aa10.57□□□□□ -0.72
VNN3-205ENST00000417437 NEO1Q92859 1461 aa10.56□□□□□ -0.72
VNN3-205ENST00000417437 CERKQ8TCT0 537 aa10.56□□□□□ -0.72
VNN3-205ENST00000417437 POGZQ7Z3K3 1410 aa10.56□□□□□ -0.72
VNN3-205ENST00000417437 DISP3Q9P2K9 1392 aa10.55□□□□□ -0.72
VNN3-205ENST00000417437 RANGAP1P46060 587 aaPredicted RBP10.55□□□□□ -0.72
VNN3-205ENST00000417437 MLECQ14165 292 aa10.55□□□□□ -0.72
VNN3-205ENST00000417437 PLEKHD1A6NEE1 506 aa10.53□□□□□ -0.72
VNN3-205ENST00000417437 RAPGEF6Q8TEU7 1601 aa10.53□□□□□ -0.72
VNN3-205ENST00000417437 FANCAO15360 1455 aa10.53□□□□□ -0.72
VNN3-205ENST00000417437 DENND4BO75064 1496 aaPredicted RBP10.52□□□□□ -0.73
VNN3-205ENST00000417437 AKNAQ7Z591 1439 aa10.51□□□□□ -0.73
VNN3-205ENST00000417437 CFAP74Q9C0B2 1584 aa10.51□□□□□ -0.73
VNN3-205ENST00000417437 ARHGEF40Q8TER5 1519 aa10.5□□□□□ -0.73
VNN3-205ENST00000417437 FRMPD1Q5SYB0 1578 aa10.5□□□□□ -0.73
VNN3-205ENST00000417437 FER1L4A9Z1Z3 1794 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms