RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 SUPT16HQ9Y5B9 1047 aaKnown RBP9.49□□□□□ -0.89
CCNT1-202ENST00000417344 ZCCHC6Q5VYS8 1495 aaKnown RBP9.47□□□□□ -0.89
CCNT1-202ENST00000417344 MIER1Q8N108 512 aa9.46□□□□□ -0.89
CCNT1-202ENST00000417344 PLEKHG5O94827 1062 aa9.44□□□□□ -0.9
CCNT1-202ENST00000417344 IFNLR1Q8IU57 520 aaPredicted RBP9.43□□□□□ -0.9
CCNT1-202ENST00000417344 PLCD3Q8N3E9 789 aa9.43□□□□□ -0.9
CCNT1-202ENST00000417344 RTN4Q9NQC3 1192 aaKnown RBP9.43□□□□□ -0.9
CCNT1-202ENST00000417344 ZBTB47Q9UFB7 747 aaPredicted RBP9.42□□□□□ -0.9
CCNT1-202ENST00000417344 CLEC11AQ9Y240 323 aa9.39□□□□□ -0.91
CCNT1-202ENST00000417344 PRR29P0C7W0 189 aa9.38□□□□□ -0.91
CCNT1-202ENST00000417344 PITPNM1O00562 1244 aa9.38□□□□□ -0.91
CCNT1-202ENST00000417344 KLHL34Q8N239 644 aa9.36□□□□□ -0.91
CCNT1-202ENST00000417344 SPOCK2Q92563 424 aa9.35□□□□□ -0.91
CCNT1-202ENST00000417344 CREBZFQ9NS37 354 aa9.28□□□□□ -0.92
CCNT1-202ENST00000417344 RBM19Q9Y4C8 960 aaKnown RBP9.27□□□□□ -0.92
CCNT1-202ENST00000417344 ANO8Q9HCE9 1232 aaPredicted RBP9.24□□□□□ -0.93
CCNT1-202ENST00000417344 MYT1LQ9UL68 1186 aa9.23□□□□□ -0.93
CCNT1-202ENST00000417344 CHRDL2Q6WN34 429 aa9.21□□□□□ -0.93
CCNT1-202ENST00000417344 NPM1P06748 294 aaKnown RBP eCLIP9.21□□□□□ -0.94
CCNT1-202ENST00000417344 MNX1P50219 401 aaPredicted RBP9.21□□□□□ -0.94
CCNT1-202ENST00000417344 FXR2P51116 673 aaKnown RBP eCLIP9.2□□□□□ -0.94
CCNT1-202ENST00000417344 PKD2Q13563 968 aa9.19□□□□□ -0.94
CCNT1-202ENST00000417344 BCANQ96GW7 911 aa9.19□□□□□ -0.94
CCNT1-202ENST00000417344 GSE1Q14687 1217 aa9.17□□□□□ -0.94
CCNT1-202ENST00000417344 NUBP1P53384 320 aa9.16□□□□□ -0.94
CCNT1-202ENST00000417344 DEKP35659 375 aaKnown RBP9.15□□□□□ -0.94
CCNT1-202ENST00000417344 WRNQ14191 1432 aaPredicted RBP eCLIP9.15□□□□□ -0.94
CCNT1-202ENST00000417344 FANCIQ9NVI1 1328 aa9.15□□□□□ -0.94
CCNT1-202ENST00000417344 PRKAR2AP13861 404 aaKnown RBP9.14□□□□□ -0.95
CCNT1-202ENST00000417344 ERICH6BQ5W0A0 696 aa9.14□□□□□ -0.95
CCNT1-202ENST00000417344 UBE2Q2Q8WVN8 375 aa9.14□□□□□ -0.95
CCNT1-202ENST00000417344 FAM212AQ96EL1 285 aa9.14□□□□□ -0.95
CCNT1-202ENST00000417344 CIZ1Q9ULV3 898 aaPredicted RBP9.12□□□□□ -0.95
CCNT1-202ENST00000417344 SALL2Q9Y467 1007 aaPredicted RBP9.12□□□□□ -0.95
CCNT1-202ENST00000417344 FARP1Q9Y4F1 1045 aaPredicted RBP9.12□□□□□ -0.95
CCNT1-202ENST00000417344 ECM2O94769 699 aaPredicted RBP9.12□□□□□ -0.95
CCNT1-202ENST00000417344 PIP4P2Q8N4L2 257 aa9.12□□□□□ -0.95
CCNT1-202ENST00000417344 CHADLQ6NUI6 762 aa9.11□□□□□ -0.95
CCNT1-202ENST00000417344 DCAF8L2P0C7V8 631 aa9.1□□□□□ -0.95
CCNT1-202ENST00000417344 NEFLP07196 543 aa9.07□□□□□ -0.96
CCNT1-202ENST00000417344 DCAF8Q5TAQ9 597 aa9.07□□□□□ -0.96
CCNT1-202ENST00000417344 RASEFQ8IZ41 740 aa9.06□□□□□ -0.96
CCNT1-202ENST00000417344 ABCC9O60706 1549 aa9.05□□□□□ -0.96
CCNT1-202ENST00000417344 ITGAEP38570 1179 aa9.05□□□□□ -0.96
CCNT1-202ENST00000417344 CCDC136Q96JN2 1154 aa9.05□□□□□ -0.96
CCNT1-202ENST00000417344 CHRM1P11229 460 aaPredicted RBP9.04□□□□□ -0.96
CCNT1-202ENST00000417344 RSF1Q96T23 1441 aaPredicted RBP9.02□□□□□ -0.97
CCNT1-202ENST00000417344 RB1CC1Q8TDY2 1594 aa9.01□□□□□ -0.97
CCNT1-202ENST00000417344 PAK3O75914 559 aaPredicted RBP9□□□□□ -0.97
CCNT1-202ENST00000417344 KCNH8Q96L42 1107 aa9□□□□□ -0.97
CCNT1-202ENST00000417344 CEP162Q5TB80 1403 aa9□□□□□ -0.97
CCNT1-202ENST00000417344 TAOK2Q9UL54 1235 aa9□□□□□ -0.97
CCNT1-202ENST00000417344 CDK11AQ9UQ88 783 aaPredicted RBP9□□□□□ -0.97
CCNT1-202ENST00000417344 RGL2O15211 777 aa8.98□□□□□ -0.97
CCNT1-202ENST00000417344 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.96□□□□□ -0.98
CCNT1-202ENST00000417344 IL27Q8NEV9 243 aa8.95□□□□□ -0.98
CCNT1-202ENST00000417344 TSPYL2Q9H2G4 693 aaPredicted RBP8.95□□□□□ -0.98
CCNT1-202ENST00000417344 RIOK3O14730 519 aaKnown RBP8.94□□□□□ -0.98
CCNT1-202ENST00000417344 NBR1Q14596 966 aa8.94□□□□□ -0.98
CCNT1-202ENST00000417344 CCDC61Q9Y6R9 512 aa8.93□□□□□ -0.98
CCNT1-202ENST00000417344 EIF5BO60841 1220 aaKnown RBP8.93□□□□□ -0.98
CCNT1-202ENST00000417344 NOP58Q9Y2X3 529 aaKnown RBP8.93□□□□□ -0.98
CCNT1-202ENST00000417344 TNIKQ9UKE5 1360 aa8.93□□□□□ -0.98
CCNT1-202ENST00000417344 RNF25Q96BH1 459 aaPredicted RBP8.92□□□□□ -0.98
CCNT1-202ENST00000417344 PYGBP11216 843 aa8.91□□□□□ -0.98
CCNT1-202ENST00000417344 CD44P16070 742 aaKnown RBP8.9□□□□□ -0.98
CCNT1-202ENST00000417344 ZNF467Q7Z7K2 595 aaPredicted RBP8.9□□□□□ -0.98
CCNT1-202ENST00000417344 DHX57Q6P158 1386 aaKnown RBP8.9□□□□□ -0.99
CCNT1-202ENST00000417344 VGFO15240 615 aaPredicted RBP8.9□□□□□ -0.99
CCNT1-202ENST00000417344 SGIP1Q9BQI5 828 aa8.9□□□□□ -0.99
CCNT1-202ENST00000417344 RTL5Q5HYW3 569 aaPredicted RBP8.89□□□□□ -0.99
CCNT1-202ENST00000417344 PKNOX2Q96KN3 472 aa8.89□□□□□ -0.99
CCNT1-202ENST00000417344 C19orf67A6NJJ6 358 aa8.88□□□□□ -0.99
CCNT1-202ENST00000417344 HS6ST3Q8IZP7 471 aa8.88□□□□□ -0.99
CCNT1-202ENST00000417344 BBXQ8WY36 941 aaPredicted RBP8.88□□□□□ -0.99
CCNT1-202ENST00000417344 TRIM52Q96A61 297 aa8.87□□□□□ -0.99
CCNT1-202ENST00000417344 ZRANB1Q9UGI0 708 aa8.86□□□□□ -0.99
CCNT1-202ENST00000417344 ZNF579Q8NAF0 562 aaKnown RBP8.85□□□□□ -0.99
CCNT1-202ENST00000417344 DNAJC5Q9H3Z4 198 aa8.85□□□□□ -0.99
CCNT1-202ENST00000417344 SLC24A1O60721 1099 aa8.85□□□□□ -0.99
CCNT1-202ENST00000417344 CHGAP10645 457 aaKnown RBP8.85□□□□□ -0.99
CCNT1-202ENST00000417344 CCER2I3L3R5 266 aa8.84□□□□□ -0.99
CCNT1-202ENST00000417344 KIF12Q96FN5 646 aa8.83□□□□□ -1
CCNT1-202ENST00000417344 PLCB2Q00722 1185 aa8.82□□□□□ -1
CCNT1-202ENST00000417344 PDAP1Q13442 181 aaKnown RBP8.81□□□□□ -1
CCNT1-202ENST00000417344 CLCN6P51797 869 aa8.81□□□□□ -1
CCNT1-202ENST00000417344 PPP4R2Q9NY27 417 aa8.81□□□□□ -1
CCNT1-202ENST00000417344 PCDHB13Q9Y5F0 798 aa8.81□□□□□ -1
CCNT1-202ENST00000417344 C11orf95C9JLR9 678 aaPredicted RBP8.8□□□□□ -1
CCNT1-202ENST00000417344 UBTFP17480 764 aaKnown RBP8.8□□□□□ -1
CCNT1-202ENST00000417344 IRX6P78412 446 aaPredicted RBP8.8□□□□□ -1
CCNT1-202ENST00000417344 DDX10Q13206 875 aaKnown RBP8.8□□□□□ -1
CCNT1-202ENST00000417344 WASHC2AQ641Q2 1341 aa8.79□□□□□ -1
CCNT1-202ENST00000417344 STK25O00506 426 aa8.79□□□□□ -1
CCNT1-202ENST00000417344 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.78□□□□□ -1
CCNT1-202ENST00000417344 MAP3K13O43283 966 aa8.78□□□□□ -1
CCNT1-202ENST00000417344 ZFP91Q96JP5 570 aaPredicted RBP8.78□□□□□ -1
CCNT1-202ENST00000417344 IPO9Q96P70 1041 aaKnown RBP8.78□□□□□ -1
CCNT1-202ENST00000417344 NACADO15069 1562 aa8.78□□□□□ -1
CCNT1-202ENST00000417344 ANP32CO43423 234 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms