RNA–Protein interactions for RNA: ENST00000417239.1

SMIM12-201, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMIM12, Length 684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-201ENST00000417239 ADCY10Q96PN6 1610 aa16.28■□□□□ 0.2
SMIM12-201ENST00000417239 BIVM-ERCC5R4GMW8 1640 aa16.28■□□□□ 0.2
SMIM12-201ENST00000417239 PRG4Q92954 1404 aaPredicted RBP16.28■□□□□ 0.2
SMIM12-201ENST00000417239 ERICH3Q5RHP9 1530 aa16.27■□□□□ 0.2
SMIM12-201ENST00000417239 RUSC2Q8N2Y8 1516 aa16.27■□□□□ 0.2
SMIM12-201ENST00000417239 FAM69CQ0P6D2 419 aa16.24■□□□□ 0.19
SMIM12-201ENST00000417239 WRNQ14191 1432 aaPredicted RBP eCLIP16.24■□□□□ 0.19
SMIM12-201ENST00000417239 TOP2BQ02880 1626 aa16.23■□□□□ 0.19
SMIM12-201ENST00000417239 JPH4Q96JJ6 628 aa16.16■□□□□ 0.18
SMIM12-201ENST00000417239 PPRC1Q5VV67 1664 aaKnown RBP16.15■□□□□ 0.18
SMIM12-201ENST00000417239 NPM1P06748 294 aaKnown RBP eCLIP16.13■□□□□ 0.17
SMIM12-201ENST00000417239 ADGRL1O94910 1474 aa16.11■□□□□ 0.17
SMIM12-201ENST00000417239 HECW2Q9P2P5 1572 aa16.1■□□□□ 0.17
SMIM12-201ENST00000417239 GLI2P10070 1586 aa16.04■□□□□ 0.16
SMIM12-201ENST00000417239 CUL7Q14999 1698 aa16.02■□□□□ 0.16
SMIM12-201ENST00000417239 KIAA0586Q9BVV6 1533 aa16.02■□□□□ 0.15
SMIM12-201ENST00000417239 MAP3K4Q9Y6R4 1608 aa15.99■□□□□ 0.15
SMIM12-201ENST00000417239 ABCC2Q92887 1545 aa15.98■□□□□ 0.15
SMIM12-201ENST00000417239 COL17A1Q9UMD9 1497 aaPredicted RBP15.96■□□□□ 0.14
SMIM12-201ENST00000417239 ASXL2Q76L83 1435 aa15.95■□□□□ 0.14
SMIM12-201ENST00000417239 PLB1Q6P1J6 1458 aa15.94■□□□□ 0.14
SMIM12-201ENST00000417239 PTPRGP23470 1445 aa15.92■□□□□ 0.14
SMIM12-201ENST00000417239 UHRF1BP1LA0JNW5 1464 aa15.9■□□□□ 0.14
SMIM12-201ENST00000417239 EPRSP07814 1512 aaKnown RBP15.88■□□□□ 0.13
SMIM12-201ENST00000417239 ZCCHC11Q5TAX3 1644 aaKnown RBP15.87■□□□□ 0.13
SMIM12-201ENST00000417239 TEX14Q8IWB6 1497 aa15.87■□□□□ 0.13
SMIM12-201ENST00000417239 TNIKQ9UKE5 1360 aa15.86■□□□□ 0.13
SMIM12-201ENST00000417239 IQGAP2Q13576 1575 aa15.85■□□□□ 0.13
SMIM12-201ENST00000417239 IGF1RP08069 1367 aa15.84■□□□□ 0.13
SMIM12-201ENST00000417239 CARMIL2Q6F5E8 1435 aa15.84■□□□□ 0.13
SMIM12-201ENST00000417239 KDM5BQ9UGL1 1544 aa15.84■□□□□ 0.13
SMIM12-201ENST00000417239 TTBK1Q5TCY1 1321 aaPredicted RBP15.81■□□□□ 0.12
SMIM12-201ENST00000417239 UACAQ9BZF9 1416 aa15.81■□□□□ 0.12
SMIM12-201ENST00000417239 KIF21BO75037 1637 aa15.8■□□□□ 0.12
SMIM12-201ENST00000417239 FBXO41Q8TF61 875 aa15.8■□□□□ 0.12
SMIM12-201ENST00000417239 DISP1Q96F81 1524 aa15.79■□□□□ 0.12
SMIM12-201ENST00000417239 KIF27Q86VH2 1401 aa15.79■□□□□ 0.12
SMIM12-201ENST00000417239 CFAP43Q8NDM7 1665 aa15.78■□□□□ 0.12
SMIM12-201ENST00000417239 SUPT5HO00267 1087 aaKnown RBP15.76■□□□□ 0.11
SMIM12-201ENST00000417239 WDR7Q9Y4E6 1490 aa15.73■□□□□ 0.11
SMIM12-201ENST00000417239 KIAA0556O60303 1618 aa15.73■□□□□ 0.11
SMIM12-201ENST00000417239 MAGI3Q5TCQ9 1506 aa15.71■□□□□ 0.11
SMIM12-201ENST00000417239 UGGT2Q9NYU1 1516 aa15.71■□□□□ 0.11
SMIM12-201ENST00000417239 CARMIL1Q5VZK9 1371 aa15.71■□□□□ 0.11
SMIM12-201ENST00000417239 ADAMTSL3P82987 1691 aa15.7■□□□□ 0.1
SMIM12-201ENST00000417239 CD109Q6YHK3 1445 aa15.64■□□□□ 0.09
SMIM12-201ENST00000417239 PTPRMP28827 1452 aa15.63■□□□□ 0.09
SMIM12-201ENST00000417239 CTTNBP2Q8WZ74 1663 aa15.63■□□□□ 0.09
SMIM12-201ENST00000417239 PCF11O94913 1555 aaKnown RBP15.62■□□□□ 0.09
SMIM12-201ENST00000417239 BCORL1Q5H9F3 1711 aa15.61■□□□□ 0.09
SMIM12-201ENST00000417239 ARAP3Q8WWN8 1544 aa15.61■□□□□ 0.09
SMIM12-201ENST00000417239 ABCA8O94911 1581 aa15.61■□□□□ 0.09
SMIM12-201ENST00000417239 MADDQ8WXG6 1647 aa15.59■□□□□ 0.09
SMIM12-201ENST00000417239 LMTK3Q96Q04 1460 aa15.59■□□□□ 0.09
SMIM12-201ENST00000417239 RAPGEF2Q9Y4G8 1499 aa15.55■□□□□ 0.08
SMIM12-201ENST00000417239 FRMPD1Q5SYB0 1578 aa15.53■□□□□ 0.08
SMIM12-201ENST00000417239 RIMS1Q86UR5 1692 aaKnown RBP15.53■□□□□ 0.08
SMIM12-201ENST00000417239 ABCA9Q8IUA7 1624 aa15.53■□□□□ 0.08
SMIM12-201ENST00000417239 KCNH8Q96L42 1107 aa15.51■□□□□ 0.07
SMIM12-201ENST00000417239 GOLGA3Q08378 1498 aa15.48■□□□□ 0.07
SMIM12-201ENST00000417239 ARHGEF40Q8TER5 1519 aa15.46■□□□□ 0.07
SMIM12-201ENST00000417239 RICTORQ6R327 1708 aa15.45■□□□□ 0.06
SMIM12-201ENST00000417239 PHLDB1Q86UU1 1377 aa15.44■□□□□ 0.06
SMIM12-201ENST00000417239 NEO1Q92859 1461 aa15.43■□□□□ 0.06
SMIM12-201ENST00000417239 SIGLEC1Q9BZZ2 1709 aa15.43■□□□□ 0.06
SMIM12-201ENST00000417239 ATP10BO94823 1461 aa15.4■□□□□ 0.06
SMIM12-201ENST00000417239 RAPGEF3O95398 923 aa15.4■□□□□ 0.06
SMIM12-201ENST00000417239 ILDR2Q71H61 639 aa15.39■□□□□ 0.05
SMIM12-201ENST00000417239 FER1L4A9Z1Z3 1794 aa15.39■□□□□ 0.05
SMIM12-201ENST00000417239 CERKQ8TCT0 537 aa15.38■□□□□ 0.05
SMIM12-201ENST00000417239 SOCS7O14512 581 aa15.37■□□□□ 0.05
SMIM12-201ENST00000417239 HSPA2P54652 639 aa15.37■□□□□ 0.05
SMIM12-201ENST00000417239 ARID4BQ4LE39 1312 aaPredicted RBP15.36■□□□□ 0.05
SMIM12-201ENST00000417239 DISP3Q9P2K9 1392 aa15.36■□□□□ 0.05
SMIM12-201ENST00000417239 PREX1Q8TCU6 1659 aa15.35■□□□□ 0.05
SMIM12-201ENST00000417239 TTC37Q6PGP7 1564 aa15.35■□□□□ 0.05
SMIM12-201ENST00000417239 RAPGEF6Q8TEU7 1601 aa15.35■□□□□ 0.05
SMIM12-201ENST00000417239 SPATA31D1Q6ZQQ2 1576 aa15.34■□□□□ 0.05
SMIM12-201ENST00000417239 ZMYM4Q5VZL5 1548 aa15.33■□□□□ 0.05
SMIM12-201ENST00000417239 CFAP74Q9C0B2 1584 aa15.33■□□□□ 0.05
SMIM12-201ENST00000417239 STRCQ7RTU9 1775 aa15.32■□□□□ 0.04
SMIM12-201ENST00000417239 ARID3CA6NKF2 412 aa15.32■□□□□ 0.04
SMIM12-201ENST00000417239 FANCAO15360 1455 aa15.32■□□□□ 0.04
SMIM12-201ENST00000417239 SAMD9Q5K651 1589 aa15.32■□□□□ 0.04
SMIM12-201ENST00000417239 EFCAB5A4FU69 1503 aa15.29■□□□□ 0.04
SMIM12-201ENST00000417239 DENND4BO75064 1496 aaPredicted RBP15.29■□□□□ 0.04
SMIM12-201ENST00000417239 ZFYVE16Q7Z3T8 1539 aa15.28■□□□□ 0.04
SMIM12-201ENST00000417239 PRXQ9BXM0 1461 aa15.28■□□□□ 0.04
SMIM12-201ENST00000417239 FHOD3Q2V2M9 1422 aa15.28■□□□□ 0.04
SMIM12-201ENST00000417239 POGZQ7Z3K3 1410 aa15.27■□□□□ 0.04
SMIM12-201ENST00000417239 AKNAQ7Z591 1439 aa15.26■□□□□ 0.03
SMIM12-201ENST00000417239 YEATS2Q9ULM3 1422 aa15.25■□□□□ 0.03
SMIM12-201ENST00000417239 NUP153P49790 1475 aaKnown RBP15.24■□□□□ 0.03
SMIM12-201ENST00000417239 HECW1Q76N89 1606 aa15.24■□□□□ 0.03
SMIM12-201ENST00000417239 ARHGEF12Q9NZN5 1544 aa15.23■□□□□ 0.03
SMIM12-201ENST00000417239 PLPPR3Q6T4P5 718 aa15.23■□□□□ 0.03
SMIM12-201ENST00000417239 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.22■□□□□ 0.03
SMIM12-201ENST00000417239 MAGI2Q86UL8 1455 aa15.22■□□□□ 0.03
SMIM12-201ENST00000417239 P3H3Q8IVL6 736 aa15.2■□□□□ 0.02
SMIM12-201ENST00000417239 FAM9AQ8IZU1 332 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms