RNA–Protein interactions for RNA: ENST00000416999.1

LINC-PINT-201, long intergenic non-protein coding RNA, p53 induced transcript, humanhuman

TSL 3

Gene LINC-PINT, Length 387 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-PINT-201ENST00000416999 ABCA5Q8WWZ7 1642 aa13.35□□□□□ -0.27
LINC-PINT-201ENST00000416999 GRIN2AQ12879 1464 aa13.3□□□□□ -0.28
LINC-PINT-201ENST00000416999 WRNQ14191 1432 aaPredicted RBP eCLIP13.29□□□□□ -0.28
LINC-PINT-201ENST00000416999 SLC24A1O60721 1099 aa13.27□□□□□ -0.29
LINC-PINT-201ENST00000416999 NUP160Q12769 1436 aa13.27□□□□□ -0.29
LINC-PINT-201ENST00000416999 CEP170Q5SW79 1584 aa13.26□□□□□ -0.29
LINC-PINT-201ENST00000416999 ADAMTS12P58397 1594 aa13.25□□□□□ -0.29
LINC-PINT-201ENST00000416999 FHAD1B1AJZ9 1412 aa13.25□□□□□ -0.29
LINC-PINT-201ENST00000416999 SHROOM2Q13796 1616 aa13.24□□□□□ -0.29
LINC-PINT-201ENST00000416999 CNKSR2Q8WXI2 1034 aa13.24□□□□□ -0.29
LINC-PINT-201ENST00000416999 ERCC6L2Q5T890 1561 aa13.22□□□□□ -0.29
LINC-PINT-201ENST00000416999 ERICH3Q5RHP9 1530 aa13.22□□□□□ -0.29
LINC-PINT-201ENST00000416999 BIVM-ERCC5R4GMW8 1640 aa13.21□□□□□ -0.29
LINC-PINT-201ENST00000416999 TOP2BQ02880 1626 aa13.2□□□□□ -0.3
LINC-PINT-201ENST00000416999 CSRNP3Q8WYN3 585 aa13.19□□□□□ -0.3
LINC-PINT-201ENST00000416999 KIF13AQ9H1H9 1805 aa13.18□□□□□ -0.3
LINC-PINT-201ENST00000416999 PRG4Q92954 1404 aaPredicted RBP13.15□□□□□ -0.3
LINC-PINT-201ENST00000416999 NPM1P06748 294 aaKnown RBP eCLIP13.15□□□□□ -0.3
LINC-PINT-201ENST00000416999 JPH4Q96JJ6 628 aa13.14□□□□□ -0.31
LINC-PINT-201ENST00000416999 NCBP3Q53F19 620 aaKnown RBP13.12□□□□□ -0.31
LINC-PINT-201ENST00000416999 ABCC10Q5T3U5 1492 aa13.1□□□□□ -0.31
LINC-PINT-201ENST00000416999 MAPKBP1O60336 1514 aa13.1□□□□□ -0.31
LINC-PINT-201ENST00000416999 SUPT5HO00267 1087 aaKnown RBP13.1□□□□□ -0.31
LINC-PINT-201ENST00000416999 FAM69CQ0P6D2 419 aa13.09□□□□□ -0.31
LINC-PINT-201ENST00000416999 HOXD11P31277 338 aaPredicted RBP13.08□□□□□ -0.32
LINC-PINT-201ENST00000416999 RUSC2Q8N2Y8 1516 aa13.08□□□□□ -0.32
LINC-PINT-201ENST00000416999 RNF216Q9NWF9 866 aaPredicted RBP13.06□□□□□ -0.32
LINC-PINT-201ENST00000416999 DIP2BQ9P265 1576 aa13.05□□□□□ -0.32
LINC-PINT-201ENST00000416999 KIAA0586Q9BVV6 1533 aa13.03□□□□□ -0.32
LINC-PINT-201ENST00000416999 KDM6BO15054 1643 aa13.02□□□□□ -0.32
LINC-PINT-201ENST00000416999 ADCY10Q96PN6 1610 aa13.02□□□□□ -0.33
LINC-PINT-201ENST00000416999 CUL7Q14999 1698 aa12.99□□□□□ -0.33
LINC-PINT-201ENST00000416999 NPM3O75607 178 aaKnown RBP12.99□□□□□ -0.33
LINC-PINT-201ENST00000416999 TSPOAP1O95153 1857 aa12.96□□□□□ -0.33
LINC-PINT-201ENST00000416999 KIF27Q86VH2 1401 aa12.96□□□□□ -0.34
LINC-PINT-201ENST00000416999 CARMIL2Q6F5E8 1435 aa12.95□□□□□ -0.34
LINC-PINT-201ENST00000416999 PTPRGP23470 1445 aa12.94□□□□□ -0.34
LINC-PINT-201ENST00000416999 IGF1RP08069 1367 aa12.94□□□□□ -0.34
LINC-PINT-201ENST00000416999 KDM4FA0A1W2PPD8 638 aa12.93□□□□□ -0.34
LINC-PINT-201ENST00000416999 TNIKQ9UKE5 1360 aa12.91□□□□□ -0.34
LINC-PINT-201ENST00000416999 PLB1Q6P1J6 1458 aa12.91□□□□□ -0.34
LINC-PINT-201ENST00000416999 GLI2P10070 1586 aa12.9□□□□□ -0.34
LINC-PINT-201ENST00000416999 ABCC2Q92887 1545 aa12.9□□□□□ -0.34
LINC-PINT-201ENST00000416999 SLC4A1APQ9BWU0 796 aaKnown RBP12.9□□□□□ -0.34
LINC-PINT-201ENST00000416999 DCAF8L1A6NGE4 600 aa12.88□□□□□ -0.35
LINC-PINT-201ENST00000416999 UHRF1BP1LA0JNW5 1464 aa12.87□□□□□ -0.35
LINC-PINT-201ENST00000416999 CARMIL1Q5VZK9 1371 aa12.87□□□□□ -0.35
LINC-PINT-201ENST00000416999 ASXL2Q76L83 1435 aa12.86□□□□□ -0.35
LINC-PINT-201ENST00000416999 IQGAP2Q13576 1575 aa12.86□□□□□ -0.35
LINC-PINT-201ENST00000416999 TEX14Q8IWB6 1497 aa12.84□□□□□ -0.35
LINC-PINT-201ENST00000416999 UACAQ9BZF9 1416 aa12.83□□□□□ -0.36
LINC-PINT-201ENST00000416999 PPRC1Q5VV67 1664 aaKnown RBP12.83□□□□□ -0.36
LINC-PINT-201ENST00000416999 TTBK1Q5TCY1 1321 aaPredicted RBP12.81□□□□□ -0.36
LINC-PINT-201ENST00000416999 ADGRL1O94910 1474 aa12.8□□□□□ -0.36
LINC-PINT-201ENST00000416999 MAP3K4Q9Y6R4 1608 aa12.8□□□□□ -0.36
LINC-PINT-201ENST00000416999 KDM5BQ9UGL1 1544 aa12.79□□□□□ -0.36
LINC-PINT-201ENST00000416999 EPRSP07814 1512 aaKnown RBP12.78□□□□□ -0.36
LINC-PINT-201ENST00000416999 ILDR1Q86SU0 546 aaPredicted RBP12.78□□□□□ -0.36
LINC-PINT-201ENST00000416999 DISP1Q96F81 1524 aa12.77□□□□□ -0.37
LINC-PINT-201ENST00000416999 UGGT2Q9NYU1 1516 aa12.77□□□□□ -0.37
LINC-PINT-201ENST00000416999 ZCCHC11Q5TAX3 1644 aaKnown RBP12.75□□□□□ -0.37
LINC-PINT-201ENST00000416999 RAPGEF2Q9Y4G8 1499 aa12.74□□□□□ -0.37
LINC-PINT-201ENST00000416999 RTN4Q9NQC3 1192 aaKnown RBP12.73□□□□□ -0.37
LINC-PINT-201ENST00000416999 KIAA0556O60303 1618 aa12.72□□□□□ -0.37
LINC-PINT-201ENST00000416999 COL17A1Q9UMD9 1497 aaPredicted RBP12.72□□□□□ -0.37
LINC-PINT-201ENST00000416999 WDR7Q9Y4E6 1490 aa12.72□□□□□ -0.37
LINC-PINT-201ENST00000416999 HECW2Q9P2P5 1572 aa12.7□□□□□ -0.38
LINC-PINT-201ENST00000416999 FAM9AQ8IZU1 332 aaPredicted RBP12.7□□□□□ -0.38
LINC-PINT-201ENST00000416999 GOLGA3Q08378 1498 aa12.7□□□□□ -0.38
LINC-PINT-201ENST00000416999 CFAP43Q8NDM7 1665 aa12.7□□□□□ -0.38
LINC-PINT-201ENST00000416999 MAGI3Q5TCQ9 1506 aa12.68□□□□□ -0.38
LINC-PINT-201ENST00000416999 CD109Q6YHK3 1445 aa12.67□□□□□ -0.38
LINC-PINT-201ENST00000416999 CTTNBP2Q8WZ74 1663 aa12.67□□□□□ -0.38
LINC-PINT-201ENST00000416999 ABCA8O94911 1581 aa12.62□□□□□ -0.39
LINC-PINT-201ENST00000416999 PHLDB1Q86UU1 1377 aa12.62□□□□□ -0.39
LINC-PINT-201ENST00000416999 AMER1Q5JTC6 1135 aaPredicted RBP12.62□□□□□ -0.39
LINC-PINT-201ENST00000416999 KCNH8Q96L42 1107 aa12.61□□□□□ -0.39
LINC-PINT-201ENST00000416999 ARAP3Q8WWN8 1544 aa12.6□□□□□ -0.39
LINC-PINT-201ENST00000416999 KIF21BO75037 1637 aa12.56□□□□□ -0.4
LINC-PINT-201ENST00000416999 FBXO41Q8TF61 875 aa12.55□□□□□ -0.4
LINC-PINT-201ENST00000416999 ABCA9Q8IUA7 1624 aa12.53□□□□□ -0.4
LINC-PINT-201ENST00000416999 PRXQ9BXM0 1461 aa12.53□□□□□ -0.4
LINC-PINT-201ENST00000416999 NEO1Q92859 1461 aa12.52□□□□□ -0.41
LINC-PINT-201ENST00000416999 ATP10BO94823 1461 aa12.51□□□□□ -0.41
LINC-PINT-201ENST00000416999 ADAMTSL3P82987 1691 aa12.51□□□□□ -0.41
LINC-PINT-201ENST00000416999 PTPRMP28827 1452 aa12.5□□□□□ -0.41
LINC-PINT-201ENST00000416999 RNF39Q9H2S5 420 aa12.49□□□□□ -0.41
LINC-PINT-201ENST00000416999 BCORL1Q5H9F3 1711 aa12.46□□□□□ -0.41
LINC-PINT-201ENST00000416999 RAPGEF6Q8TEU7 1601 aa12.46□□□□□ -0.41
LINC-PINT-201ENST00000416999 ARID4BQ4LE39 1312 aaPredicted RBP12.44□□□□□ -0.42
LINC-PINT-201ENST00000416999 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.44□□□□□ -0.42
LINC-PINT-201ENST00000416999 RAPGEF3O95398 923 aa12.44□□□□□ -0.42
LINC-PINT-201ENST00000416999 HNRNPUL2Q1KMD3 747 aaKnown RBP12.44□□□□□ -0.42
LINC-PINT-201ENST00000416999 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.44□□□□□ -0.42
LINC-PINT-201ENST00000416999 PCF11O94913 1555 aaKnown RBP12.43□□□□□ -0.42
LINC-PINT-201ENST00000416999 SAMD9Q5K651 1589 aa12.43□□□□□ -0.42
LINC-PINT-201ENST00000416999 ZBTB22O15209 634 aa12.43□□□□□ -0.42
LINC-PINT-201ENST00000416999 P3H3Q8IVL6 736 aa12.43□□□□□ -0.42
LINC-PINT-201ENST00000416999 CFAP74Q9C0B2 1584 aa12.43□□□□□ -0.42
LINC-PINT-201ENST00000416999 ARID3CA6NKF2 412 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms