RNA–Protein interactions for RNA: ENST00000416842.1

AP001042.1-201, humanhuman

TSL 3 BASIC

Gene AP001042.1, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001042.1-201ENST00000416842 PIAS4Q8N2W9 510 aaPredicted RBP13.48□□□□□ -0.25
AP001042.1-201ENST00000416842 ILDR1Q86SU0 546 aaPredicted RBP13.46□□□□□ -0.25
AP001042.1-201ENST00000416842 ABCC10Q5T3U5 1492 aa13.45□□□□□ -0.26
AP001042.1-201ENST00000416842 KDM4FA0A1W2PPD8 638 aa13.44□□□□□ -0.26
AP001042.1-201ENST00000416842 DIP2BQ9P265 1576 aa13.44□□□□□ -0.26
AP001042.1-201ENST00000416842 FHAD1B1AJZ9 1412 aa13.43□□□□□ -0.26
AP001042.1-201ENST00000416842 KDM6BO15054 1643 aa13.42□□□□□ -0.26
AP001042.1-201ENST00000416842 TSPOAP1O95153 1857 aa13.42□□□□□ -0.26
AP001042.1-201ENST00000416842 PRG4Q92954 1404 aaPredicted RBP13.42□□□□□ -0.26
AP001042.1-201ENST00000416842 MAPKBP1O60336 1514 aa13.41□□□□□ -0.26
AP001042.1-201ENST00000416842 FAM69CQ0P6D2 419 aa13.41□□□□□ -0.26
AP001042.1-201ENST00000416842 ADCY10Q96PN6 1610 aa13.39□□□□□ -0.27
AP001042.1-201ENST00000416842 TOP2BQ02880 1626 aa13.39□□□□□ -0.27
AP001042.1-201ENST00000416842 BIVM-ERCC5R4GMW8 1640 aa13.39□□□□□ -0.27
AP001042.1-201ENST00000416842 ERICH3Q5RHP9 1530 aa13.39□□□□□ -0.27
AP001042.1-201ENST00000416842 RUSC2Q8N2Y8 1516 aa13.37□□□□□ -0.27
AP001042.1-201ENST00000416842 JPH4Q96JJ6 628 aa13.35□□□□□ -0.27
AP001042.1-201ENST00000416842 NPM1P06748 294 aaKnown RBP eCLIP13.32□□□□□ -0.28
AP001042.1-201ENST00000416842 EEA1Q15075 1411 aa13.3□□□□□ -0.28
AP001042.1-201ENST00000416842 PPRC1Q5VV67 1664 aaKnown RBP13.28□□□□□ -0.28
AP001042.1-201ENST00000416842 PLPPR3Q6T4P5 718 aa13.27□□□□□ -0.29
AP001042.1-201ENST00000416842 ADGRL1O94910 1474 aa13.26□□□□□ -0.29
AP001042.1-201ENST00000416842 CSRNP3Q8WYN3 585 aa13.25□□□□□ -0.29
AP001042.1-201ENST00000416842 HECW2Q9P2P5 1572 aa13.24□□□□□ -0.29
AP001042.1-201ENST00000416842 LOC105371045A0A1W2PR82 267 aa13.24□□□□□ -0.29
AP001042.1-201ENST00000416842 PPP6R1Q9UPN7 881 aa13.23□□□□□ -0.29
AP001042.1-201ENST00000416842 FAM9AQ8IZU1 332 aaPredicted RBP13.21□□□□□ -0.29
AP001042.1-201ENST00000416842 KIAA0586Q9BVV6 1533 aa13.19□□□□□ -0.3
AP001042.1-201ENST00000416842 GLI2P10070 1586 aa13.19□□□□□ -0.3
AP001042.1-201ENST00000416842 CUL7Q14999 1698 aa13.18□□□□□ -0.3
AP001042.1-201ENST00000416842 IGF1RP08069 1367 aa13.17□□□□□ -0.3
AP001042.1-201ENST00000416842 KIF27Q86VH2 1401 aa13.16□□□□□ -0.3
AP001042.1-201ENST00000416842 ADRA2BP18089 450 aa13.16□□□□□ -0.3
AP001042.1-201ENST00000416842 ABCC2Q92887 1545 aa13.15□□□□□ -0.3
AP001042.1-201ENST00000416842 COL17A1Q9UMD9 1497 aaPredicted RBP13.15□□□□□ -0.3
AP001042.1-201ENST00000416842 ASXL2Q76L83 1435 aa13.14□□□□□ -0.31
AP001042.1-201ENST00000416842 PTPRGP23470 1445 aa13.13□□□□□ -0.31
AP001042.1-201ENST00000416842 MAP3K4Q9Y6R4 1608 aa13.13□□□□□ -0.31
AP001042.1-201ENST00000416842 PLB1Q6P1J6 1458 aa13.13□□□□□ -0.31
AP001042.1-201ENST00000416842 PRXQ9BXM0 1461 aa13.13□□□□□ -0.31
AP001042.1-201ENST00000416842 TTBK1Q5TCY1 1321 aaPredicted RBP13.09□□□□□ -0.31
AP001042.1-201ENST00000416842 TNIKQ9UKE5 1360 aa13.08□□□□□ -0.31
AP001042.1-201ENST00000416842 UHRF1BP1LA0JNW5 1464 aa13.08□□□□□ -0.32
AP001042.1-201ENST00000416842 EPRSP07814 1512 aaKnown RBP13.08□□□□□ -0.32
AP001042.1-201ENST00000416842 KIF21BO75037 1637 aa13.06□□□□□ -0.32
AP001042.1-201ENST00000416842 TEX14Q8IWB6 1497 aa13.06□□□□□ -0.32
AP001042.1-201ENST00000416842 CARMIL2Q6F5E8 1435 aa13.05□□□□□ -0.32
AP001042.1-201ENST00000416842 ZCCHC11Q5TAX3 1644 aaKnown RBP13.05□□□□□ -0.32
AP001042.1-201ENST00000416842 IQGAP2Q13576 1575 aa13.04□□□□□ -0.32
AP001042.1-201ENST00000416842 UACAQ9BZF9 1416 aa13.04□□□□□ -0.32
AP001042.1-201ENST00000416842 GOLGA3Q08378 1498 aa13.04□□□□□ -0.32
AP001042.1-201ENST00000416842 CARMIL1Q5VZK9 1371 aa13.03□□□□□ -0.32
AP001042.1-201ENST00000416842 KDM5BQ9UGL1 1544 aa13.03□□□□□ -0.32
AP001042.1-201ENST00000416842 FBXO41Q8TF61 875 aa13.02□□□□□ -0.33
AP001042.1-201ENST00000416842 RAPGEF2Q9Y4G8 1499 aa13.02□□□□□ -0.33
AP001042.1-201ENST00000416842 DISP1Q96F81 1524 aa13□□□□□ -0.33
AP001042.1-201ENST00000416842 CFAP43Q8NDM7 1665 aa12.96□□□□□ -0.33
AP001042.1-201ENST00000416842 UBTFP17480 764 aaKnown RBP12.95□□□□□ -0.34
AP001042.1-201ENST00000416842 WDR7Q9Y4E6 1490 aa12.95□□□□□ -0.34
AP001042.1-201ENST00000416842 KIAA0556O60303 1618 aa12.94□□□□□ -0.34
AP001042.1-201ENST00000416842 UGGT2Q9NYU1 1516 aa12.93□□□□□ -0.34
AP001042.1-201ENST00000416842 EHMT2Q96KQ7 1210 aa12.93□□□□□ -0.34
AP001042.1-201ENST00000416842 MAGI3Q5TCQ9 1506 aa12.93□□□□□ -0.34
AP001042.1-201ENST00000416842 ADAMTSL3P82987 1691 aa12.9□□□□□ -0.34
AP001042.1-201ENST00000416842 CEP162Q5TB80 1403 aa12.9□□□□□ -0.34
AP001042.1-201ENST00000416842 CD109Q6YHK3 1445 aa12.9□□□□□ -0.34
AP001042.1-201ENST00000416842 PTPRMP28827 1452 aa12.87□□□□□ -0.35
AP001042.1-201ENST00000416842 ABCA8O94911 1581 aa12.85□□□□□ -0.35
AP001042.1-201ENST00000416842 ARAP3Q8WWN8 1544 aa12.84□□□□□ -0.35
AP001042.1-201ENST00000416842 CTTNBP2Q8WZ74 1663 aa12.84□□□□□ -0.35
AP001042.1-201ENST00000416842 PCF11O94913 1555 aaKnown RBP12.84□□□□□ -0.35
AP001042.1-201ENST00000416842 BCORL1Q5H9F3 1711 aa12.83□□□□□ -0.36
AP001042.1-201ENST00000416842 CLIP1P30622 1438 aa12.83□□□□□ -0.36
AP001042.1-201ENST00000416842 KCNH8Q96L42 1107 aa12.83□□□□□ -0.36
AP001042.1-201ENST00000416842 MADDQ8WXG6 1647 aa12.82□□□□□ -0.36
AP001042.1-201ENST00000416842 LMTK3Q96Q04 1460 aa12.82□□□□□ -0.36
AP001042.1-201ENST00000416842 RIMS1Q86UR5 1692 aaKnown RBP12.78□□□□□ -0.36
AP001042.1-201ENST00000416842 FRMPD1Q5SYB0 1578 aa12.77□□□□□ -0.36
AP001042.1-201ENST00000416842 ABCA9Q8IUA7 1624 aa12.77□□□□□ -0.36
AP001042.1-201ENST00000416842 ARHGAP35Q9NRY4 1499 aa12.77□□□□□ -0.37
AP001042.1-201ENST00000416842 VPS8Q8N3P4 1428 aa12.72□□□□□ -0.37
AP001042.1-201ENST00000416842 PHLDB1Q86UU1 1377 aa12.72□□□□□ -0.37
AP001042.1-201ENST00000416842 RAPGEF3O95398 923 aa12.72□□□□□ -0.37
AP001042.1-201ENST00000416842 ARHGEF40Q8TER5 1519 aa12.71□□□□□ -0.38
AP001042.1-201ENST00000416842 ATP10BO94823 1461 aa12.71□□□□□ -0.38
AP001042.1-201ENST00000416842 HSPA2P54652 639 aa12.7□□□□□ -0.38
AP001042.1-201ENST00000416842 ILDR2Q71H61 639 aa12.7□□□□□ -0.38
AP001042.1-201ENST00000416842 NEO1Q92859 1461 aa12.7□□□□□ -0.38
AP001042.1-201ENST00000416842 ARID4BQ4LE39 1312 aaPredicted RBP12.69□□□□□ -0.38
AP001042.1-201ENST00000416842 RICTORQ6R327 1708 aa12.69□□□□□ -0.38
AP001042.1-201ENST00000416842 ARID3CA6NKF2 412 aa12.69□□□□□ -0.38
AP001042.1-201ENST00000416842 CERKQ8TCT0 537 aa12.69□□□□□ -0.38
AP001042.1-201ENST00000416842 SIGLEC1Q9BZZ2 1709 aa12.68□□□□□ -0.38
AP001042.1-201ENST00000416842 EFCAB5A4FU69 1503 aa12.68□□□□□ -0.38
AP001042.1-201ENST00000416842 SAMD9Q5K651 1589 aa12.66□□□□□ -0.38
AP001042.1-201ENST00000416842 SOCS7O14512 581 aa12.66□□□□□ -0.38
AP001042.1-201ENST00000416842 DISP3Q9P2K9 1392 aa12.66□□□□□ -0.38
AP001042.1-201ENST00000416842 RANGAP1P46060 587 aaPredicted RBP12.65□□□□□ -0.38
AP001042.1-201ENST00000416842 FER1L4A9Z1Z3 1794 aa12.65□□□□□ -0.38
AP001042.1-201ENST00000416842 RAPGEF6Q8TEU7 1601 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms