RNA–Protein interactions for RNA: ENST00000416754.1

RUNX1-206, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-206ENST00000416754 NUP160Q12769 1436 aa16.27■□□□□ 0.19
RUNX1-206ENST00000416754 FAM69CQ0P6D2 419 aa16.26■□□□□ 0.19
RUNX1-206ENST00000416754 ABCA5Q8WWZ7 1642 aa16.26■□□□□ 0.19
RUNX1-206ENST00000416754 KIF13AQ9H1H9 1805 aa16.24■□□□□ 0.19
RUNX1-206ENST00000416754 PRG4Q92954 1404 aaPredicted RBP16.2■□□□□ 0.18
RUNX1-206ENST00000416754 JPH4Q96JJ6 628 aa16.19■□□□□ 0.18
RUNX1-206ENST00000416754 ADAMTS12P58397 1594 aa16.18■□□□□ 0.18
RUNX1-206ENST00000416754 SHROOM2Q13796 1616 aa16.18■□□□□ 0.18
RUNX1-206ENST00000416754 FHAD1B1AJZ9 1412 aa16.17■□□□□ 0.18
RUNX1-206ENST00000416754 DMRT2Q9Y5R5 561 aa16.16■□□□□ 0.18
RUNX1-206ENST00000416754 ABCC10Q5T3U5 1492 aa16.15■□□□□ 0.18
RUNX1-206ENST00000416754 WRNQ14191 1432 aaPredicted RBP eCLIP16.14■□□□□ 0.17
RUNX1-206ENST00000416754 NPM1P06748 294 aaKnown RBP eCLIP16.13■□□□□ 0.17
RUNX1-206ENST00000416754 DIP2BQ9P265 1576 aa16.05■□□□□ 0.16
RUNX1-206ENST00000416754 SCAF1Q9H7N4 1312 aaKnown RBP16.05■□□□□ 0.16
RUNX1-206ENST00000416754 KDM6BO15054 1643 aa16.04■□□□□ 0.16
RUNX1-206ENST00000416754 MAPKBP1O60336 1514 aa16.03■□□□□ 0.16
RUNX1-206ENST00000416754 ADCY10Q96PN6 1610 aa16.02■□□□□ 0.16
RUNX1-206ENST00000416754 ERICH3Q5RHP9 1530 aa16.02■□□□□ 0.15
RUNX1-206ENST00000416754 SUPT5HO00267 1087 aaKnown RBP16.01■□□□□ 0.15
RUNX1-206ENST00000416754 PPP4R3CPQ6ZMV5 832 aa16.01■□□□□ 0.15
RUNX1-206ENST00000416754 TSPOAP1O95153 1857 aa16.01■□□□□ 0.15
RUNX1-206ENST00000416754 TTBK1Q5TCY1 1321 aaPredicted RBP16■□□□□ 0.15
RUNX1-206ENST00000416754 TOP2BQ02880 1626 aa15.97■□□□□ 0.15
RUNX1-206ENST00000416754 RUSC2Q8N2Y8 1516 aa15.95■□□□□ 0.14
RUNX1-206ENST00000416754 BIVM-ERCC5R4GMW8 1640 aa15.95■□□□□ 0.14
RUNX1-206ENST00000416754 ADGRL1O94910 1474 aa15.92■□□□□ 0.14
RUNX1-206ENST00000416754 COL17A1Q9UMD9 1497 aaPredicted RBP15.89■□□□□ 0.13
RUNX1-206ENST00000416754 PTPRGP23470 1445 aa15.88■□□□□ 0.13
RUNX1-206ENST00000416754 KIAA0586Q9BVV6 1533 aa15.88■□□□□ 0.13
RUNX1-206ENST00000416754 IGF1RP08069 1367 aa15.86■□□□□ 0.13
RUNX1-206ENST00000416754 ASXL2Q76L83 1435 aa15.85■□□□□ 0.13
RUNX1-206ENST00000416754 HECW2Q9P2P5 1572 aa15.83■□□□□ 0.13
RUNX1-206ENST00000416754 PPRC1Q5VV67 1664 aaKnown RBP15.82■□□□□ 0.12
RUNX1-206ENST00000416754 ABCC2Q92887 1545 aa15.8■□□□□ 0.12
RUNX1-206ENST00000416754 TNIKQ9UKE5 1360 aa15.78■□□□□ 0.12
RUNX1-206ENST00000416754 PLB1Q6P1J6 1458 aa15.78■□□□□ 0.12
RUNX1-206ENST00000416754 GLI2P10070 1586 aa15.76■□□□□ 0.11
RUNX1-206ENST00000416754 EPRSP07814 1512 aaKnown RBP15.73■□□□□ 0.11
RUNX1-206ENST00000416754 CARMIL2Q6F5E8 1435 aa15.71■□□□□ 0.11
RUNX1-206ENST00000416754 UACAQ9BZF9 1416 aa15.71■□□□□ 0.11
RUNX1-206ENST00000416754 CARMIL1Q5VZK9 1371 aa15.71■□□□□ 0.11
RUNX1-206ENST00000416754 KIF27Q86VH2 1401 aa15.7■□□□□ 0.1
RUNX1-206ENST00000416754 FBXO41Q8TF61 875 aa15.7■□□□□ 0.1
RUNX1-206ENST00000416754 CUL7Q14999 1698 aa15.7■□□□□ 0.1
RUNX1-206ENST00000416754 UHRF1BP1LA0JNW5 1464 aa15.69■□□□□ 0.1
RUNX1-206ENST00000416754 MAP3K4Q9Y6R4 1608 aa15.65■□□□□ 0.1
RUNX1-206ENST00000416754 DISP1Q96F81 1524 aa15.65■□□□□ 0.1
RUNX1-206ENST00000416754 KDM5BQ9UGL1 1544 aa15.64■□□□□ 0.09
RUNX1-206ENST00000416754 TEX14Q8IWB6 1497 aa15.64■□□□□ 0.09
RUNX1-206ENST00000416754 KCNH8Q96L42 1107 aa15.63■□□□□ 0.09
RUNX1-206ENST00000416754 IQGAP2Q13576 1575 aa15.61■□□□□ 0.09
RUNX1-206ENST00000416754 HOXD11P31277 338 aaPredicted RBP15.6■□□□□ 0.09
RUNX1-206ENST00000416754 CNKSR2Q8WXI2 1034 aa15.6■□□□□ 0.09
RUNX1-206ENST00000416754 ZCCHC11Q5TAX3 1644 aaKnown RBP15.59■□□□□ 0.09
RUNX1-206ENST00000416754 CD109Q6YHK3 1445 aa15.57■□□□□ 0.08
RUNX1-206ENST00000416754 WDR7Q9Y4E6 1490 aa15.55■□□□□ 0.08
RUNX1-206ENST00000416754 KIF21BO75037 1637 aa15.51■□□□□ 0.07
RUNX1-206ENST00000416754 MAGI3Q5TCQ9 1506 aa15.51■□□□□ 0.07
RUNX1-206ENST00000416754 UGGT2Q9NYU1 1516 aa15.51■□□□□ 0.07
RUNX1-206ENST00000416754 ARID3CA6NKF2 412 aa15.5■□□□□ 0.07
RUNX1-206ENST00000416754 KIAA0556O60303 1618 aa15.48■□□□□ 0.07
RUNX1-206ENST00000416754 PTPRMP28827 1452 aa15.47■□□□□ 0.07
RUNX1-206ENST00000416754 DCAF8L1A6NGE4 600 aa15.46■□□□□ 0.07
RUNX1-206ENST00000416754 RAPGEF3O95398 923 aa15.46■□□□□ 0.07
RUNX1-206ENST00000416754 RNF216Q9NWF9 866 aaPredicted RBP15.45■□□□□ 0.06
RUNX1-206ENST00000416754 RAPGEF2Q9Y4G8 1499 aa15.45■□□□□ 0.06
RUNX1-206ENST00000416754 HSPA2P54652 639 aa15.43■□□□□ 0.06
RUNX1-206ENST00000416754 CFAP43Q8NDM7 1665 aa15.41■□□□□ 0.06
RUNX1-206ENST00000416754 ARAP3Q8WWN8 1544 aa15.41■□□□□ 0.06
RUNX1-206ENST00000416754 ADAMTSL3P82987 1691 aa15.41■□□□□ 0.06
RUNX1-206ENST00000416754 ARID4BQ4LE39 1312 aaPredicted RBP15.41■□□□□ 0.06
RUNX1-206ENST00000416754 LMTK3Q96Q04 1460 aa15.4■□□□□ 0.06
RUNX1-206ENST00000416754 ILDR2Q71H61 639 aa15.4■□□□□ 0.06
RUNX1-206ENST00000416754 ABCA8O94911 1581 aa15.4■□□□□ 0.06
RUNX1-206ENST00000416754 P3H3Q8IVL6 736 aa15.39■□□□□ 0.05
RUNX1-206ENST00000416754 PCF11O94913 1555 aaKnown RBP15.36■□□□□ 0.05
RUNX1-206ENST00000416754 CERKQ8TCT0 537 aa15.35■□□□□ 0.05
RUNX1-206ENST00000416754 ATP10BO94823 1461 aa15.34■□□□□ 0.05
RUNX1-206ENST00000416754 MADDQ8WXG6 1647 aa15.33■□□□□ 0.04
RUNX1-206ENST00000416754 GOLGA3Q08378 1498 aa15.31■□□□□ 0.04
RUNX1-206ENST00000416754 BCORL1Q5H9F3 1711 aa15.3■□□□□ 0.04
RUNX1-206ENST00000416754 PHLDB1Q86UU1 1377 aa15.28■□□□□ 0.04
RUNX1-206ENST00000416754 DISP3Q9P2K9 1392 aa15.28■□□□□ 0.04
RUNX1-206ENST00000416754 SOCS7O14512 581 aa15.27■□□□□ 0.04
RUNX1-206ENST00000416754 FRMPD1Q5SYB0 1578 aa15.27■□□□□ 0.03
RUNX1-206ENST00000416754 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.26■□□□□ 0.03
RUNX1-206ENST00000416754 HNRNPUL2Q1KMD3 747 aaKnown RBP15.26■□□□□ 0.03
RUNX1-206ENST00000416754 MLECQ14165 292 aa15.25■□□□□ 0.03
RUNX1-206ENST00000416754 RIMS1Q86UR5 1692 aaKnown RBP15.25■□□□□ 0.03
RUNX1-206ENST00000416754 ABCA9Q8IUA7 1624 aa15.25■□□□□ 0.03
RUNX1-206ENST00000416754 NEO1Q92859 1461 aa15.24■□□□□ 0.03
RUNX1-206ENST00000416754 CTTNBP2Q8WZ74 1663 aa15.23■□□□□ 0.03
RUNX1-206ENST00000416754 NPM3O75607 178 aaKnown RBP15.22■□□□□ 0.03
RUNX1-206ENST00000416754 NCBP3Q53F19 620 aaKnown RBP15.21■□□□□ 0.03
RUNX1-206ENST00000416754 PRXQ9BXM0 1461 aa15.19■□□□□ 0.02
RUNX1-206ENST00000416754 YEATS2Q9ULM3 1422 aa15.18■□□□□ 0.02
RUNX1-206ENST00000416754 RANGAP1P46060 587 aaPredicted RBP15.18■□□□□ 0.02
RUNX1-206ENST00000416754 CEBPAP49715 358 aaPredicted RBP15.18■□□□□ 0.02
RUNX1-206ENST00000416754 FAM9AQ8IZU1 332 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms