RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 JPH4Q96JJ6 628 aa17.82■□□□□ 0.44
MDC1-202ENST00000416571 RUSC2Q8N2Y8 1516 aa17.81■□□□□ 0.44
MDC1-202ENST00000416571 NPM1P06748 294 aaKnown RBP eCLIP17.78■□□□□ 0.44
MDC1-202ENST00000416571 FAM69CQ0P6D2 419 aa17.72■□□□□ 0.43
MDC1-202ENST00000416571 MAPKBP1O60336 1514 aa17.71■□□□□ 0.43
MDC1-202ENST00000416571 ABCC10Q5T3U5 1492 aa17.7■□□□□ 0.42
MDC1-202ENST00000416571 CUL7Q14999 1698 aa17.69■□□□□ 0.42
MDC1-202ENST00000416571 ADCY10Q96PN6 1610 aa17.69■□□□□ 0.42
MDC1-202ENST00000416571 KDM4FA0A1W2PPD8 638 aa17.68■□□□□ 0.42
MDC1-202ENST00000416571 DIP2BQ9P265 1576 aa17.68■□□□□ 0.42
MDC1-202ENST00000416571 KIAA0586Q9BVV6 1533 aa17.67■□□□□ 0.42
MDC1-202ENST00000416571 KIF27Q86VH2 1401 aa17.66■□□□□ 0.42
MDC1-202ENST00000416571 IGF1RP08069 1367 aa17.63■□□□□ 0.41
MDC1-202ENST00000416571 KDM6BO15054 1643 aa17.61■□□□□ 0.41
MDC1-202ENST00000416571 TSPOAP1O95153 1857 aa17.6■□□□□ 0.41
MDC1-202ENST00000416571 PTPRGP23470 1445 aa17.56■□□□□ 0.4
MDC1-202ENST00000416571 TTBK1Q5TCY1 1321 aaPredicted RBP17.56■□□□□ 0.4
MDC1-202ENST00000416571 CARMIL2Q6F5E8 1435 aa17.55■□□□□ 0.4
MDC1-202ENST00000416571 CARMIL1Q5VZK9 1371 aa17.54■□□□□ 0.4
MDC1-202ENST00000416571 FBXO41Q8TF61 875 aa17.52■□□□□ 0.4
MDC1-202ENST00000416571 IQGAP2Q13576 1575 aa17.51■□□□□ 0.39
MDC1-202ENST00000416571 TNIKQ9UKE5 1360 aa17.51■□□□□ 0.39
MDC1-202ENST00000416571 ABCC2Q92887 1545 aa17.5■□□□□ 0.39
MDC1-202ENST00000416571 LMTK3Q96Q04 1460 aa17.5■□□□□ 0.39
MDC1-202ENST00000416571 PLB1Q6P1J6 1458 aa17.46■□□□□ 0.39
MDC1-202ENST00000416571 ASXL2Q76L83 1435 aa17.46■□□□□ 0.39
MDC1-202ENST00000416571 HECW2Q9P2P5 1572 aa17.45■□□□□ 0.38
MDC1-202ENST00000416571 GLI2P10070 1586 aa17.43■□□□□ 0.38
MDC1-202ENST00000416571 UHRF1BP1LA0JNW5 1464 aa17.43■□□□□ 0.38
MDC1-202ENST00000416571 UACAQ9BZF9 1416 aa17.42■□□□□ 0.38
MDC1-202ENST00000416571 PPRC1Q5VV67 1664 aaKnown RBP17.4■□□□□ 0.38
MDC1-202ENST00000416571 DISP1Q96F81 1524 aa17.39■□□□□ 0.37
MDC1-202ENST00000416571 SOCS7O14512 581 aa17.38■□□□□ 0.37
MDC1-202ENST00000416571 RAPGEF2Q9Y4G8 1499 aa17.37■□□□□ 0.37
MDC1-202ENST00000416571 UGGT2Q9NYU1 1516 aa17.36■□□□□ 0.37
MDC1-202ENST00000416571 KDM5BQ9UGL1 1544 aa17.35■□□□□ 0.37
MDC1-202ENST00000416571 KIAA0556O60303 1618 aa17.35■□□□□ 0.37
MDC1-202ENST00000416571 ZCCHC11Q5TAX3 1644 aaKnown RBP17.35■□□□□ 0.37
MDC1-202ENST00000416571 EPRSP07814 1512 aaKnown RBP17.34■□□□□ 0.37
MDC1-202ENST00000416571 MAP3K4Q9Y6R4 1608 aa17.34■□□□□ 0.37
MDC1-202ENST00000416571 TEX14Q8IWB6 1497 aa17.33■□□□□ 0.37
MDC1-202ENST00000416571 ADGRL1O94910 1474 aa17.31■□□□□ 0.36
MDC1-202ENST00000416571 CTTNBP2Q8WZ74 1663 aa17.29■□□□□ 0.36
MDC1-202ENST00000416571 ILDR2Q71H61 639 aa17.28■□□□□ 0.36
MDC1-202ENST00000416571 COL17A1Q9UMD9 1497 aaPredicted RBP17.26■□□□□ 0.35
MDC1-202ENST00000416571 WDR7Q9Y4E6 1490 aa17.26■□□□□ 0.35
MDC1-202ENST00000416571 GOLGA3Q08378 1498 aa17.24■□□□□ 0.35
MDC1-202ENST00000416571 CFAP43Q8NDM7 1665 aa17.21■□□□□ 0.35
MDC1-202ENST00000416571 CD109Q6YHK3 1445 aa17.18■□□□□ 0.34
MDC1-202ENST00000416571 ABCA8O94911 1581 aa17.17■□□□□ 0.34
MDC1-202ENST00000416571 FAM9AQ8IZU1 332 aaPredicted RBP17.17■□□□□ 0.34
MDC1-202ENST00000416571 KCNH8Q96L42 1107 aa17.17■□□□□ 0.34
MDC1-202ENST00000416571 MAGI3Q5TCQ9 1506 aa17.16■□□□□ 0.34
MDC1-202ENST00000416571 DISP3Q9P2K9 1392 aa17.11■□□□□ 0.33
MDC1-202ENST00000416571 PRXQ9BXM0 1461 aa17.11■□□□□ 0.33
MDC1-202ENST00000416571 KIF21BO75037 1637 aa17.07■□□□□ 0.32
MDC1-202ENST00000416571 ARID3CA6NKF2 412 aa17.07■□□□□ 0.32
MDC1-202ENST00000416571 P3H3Q8IVL6 736 aa17.05■□□□□ 0.32
MDC1-202ENST00000416571 ARAP3Q8WWN8 1544 aa17.03■□□□□ 0.32
MDC1-202ENST00000416571 ATP10BO94823 1461 aa17.02■□□□□ 0.32
MDC1-202ENST00000416571 ABCA9Q8IUA7 1624 aa17.01■□□□□ 0.31
MDC1-202ENST00000416571 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.99■□□□□ 0.31
MDC1-202ENST00000416571 HNRNPUL2Q1KMD3 747 aaKnown RBP16.99■□□□□ 0.31
MDC1-202ENST00000416571 PHLDB1Q86UU1 1377 aa16.99■□□□□ 0.31
MDC1-202ENST00000416571 RAPGEF6Q8TEU7 1601 aa16.99■□□□□ 0.31
MDC1-202ENST00000416571 SAMD9Q5K651 1589 aa16.98■□□□□ 0.31
MDC1-202ENST00000416571 NEO1Q92859 1461 aa16.94■□□□□ 0.3
MDC1-202ENST00000416571 CSRNP3Q8WYN3 585 aa16.94■□□□□ 0.3
MDC1-202ENST00000416571 RAPGEF3O95398 923 aa16.92■□□□□ 0.3
MDC1-202ENST00000416571 ADAMTSL3P82987 1691 aa16.91■□□□□ 0.3
MDC1-202ENST00000416571 RANGAP1P46060 587 aaPredicted RBP16.9■□□□□ 0.3
MDC1-202ENST00000416571 PTPRMP28827 1452 aa16.9■□□□□ 0.3
MDC1-202ENST00000416571 ARID4BQ4LE39 1312 aaPredicted RBP16.9■□□□□ 0.3
MDC1-202ENST00000416571 NUP153P49790 1475 aaKnown RBP16.88■□□□□ 0.29
MDC1-202ENST00000416571 BCORL1Q5H9F3 1711 aa16.87■□□□□ 0.29
MDC1-202ENST00000416571 FRMPD1Q5SYB0 1578 aa16.87■□□□□ 0.29
MDC1-202ENST00000416571 SPATA31D1Q6ZQQ2 1576 aa16.86■□□□□ 0.29
MDC1-202ENST00000416571 EEA1Q15075 1411 aa16.86■□□□□ 0.29
MDC1-202ENST00000416571 FHOD3Q2V2M9 1422 aa16.86■□□□□ 0.29
MDC1-202ENST00000416571 MADDQ8WXG6 1647 aa16.85■□□□□ 0.29
MDC1-202ENST00000416571 PLEKHD1A6NEE1 506 aa16.85■□□□□ 0.29
MDC1-202ENST00000416571 CFAP74Q9C0B2 1584 aa16.85■□□□□ 0.29
MDC1-202ENST00000416571 DENND4BO75064 1496 aaPredicted RBP16.83■□□□□ 0.28
MDC1-202ENST00000416571 ARHGEF40Q8TER5 1519 aa16.83■□□□□ 0.28
MDC1-202ENST00000416571 RICTORQ6R327 1708 aa16.82■□□□□ 0.28
MDC1-202ENST00000416571 RIMS1Q86UR5 1692 aaKnown RBP16.81■□□□□ 0.28
MDC1-202ENST00000416571 PCF11O94913 1555 aaKnown RBP16.81■□□□□ 0.28
MDC1-202ENST00000416571 FANCAO15360 1455 aa16.8■□□□□ 0.28
MDC1-202ENST00000416571 AKNAQ7Z591 1439 aa16.8■□□□□ 0.28
MDC1-202ENST00000416571 EFCAB5A4FU69 1503 aa16.8■□□□□ 0.28
MDC1-202ENST00000416571 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.79■□□□□ 0.28
MDC1-202ENST00000416571 TTC37Q6PGP7 1564 aa16.77■□□□□ 0.28
MDC1-202ENST00000416571 POGZQ7Z3K3 1410 aa16.77■□□□□ 0.27
MDC1-202ENST00000416571 ZMYM4Q5VZL5 1548 aa16.75■□□□□ 0.27
MDC1-202ENST00000416571 ZFYVE16Q7Z3T8 1539 aa16.75■□□□□ 0.27
MDC1-202ENST00000416571 PLPPR3Q6T4P5 718 aa16.73■□□□□ 0.27
MDC1-202ENST00000416571 CDK13Q14004 1512 aaKnown RBP16.72■□□□□ 0.27
MDC1-202ENST00000416571 MAGI2Q86UL8 1455 aa16.71■□□□□ 0.27
MDC1-202ENST00000416571 HECW1Q76N89 1606 aa16.7■□□□□ 0.26
MDC1-202ENST00000416571 FER1L4A9Z1Z3 1794 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms