RNA–Protein interactions for RNA: ENST00000416372.5

RTN4R-202, Transcript of reticulon 4 receptor, humanhuman

APPRIS ALT2 TSL 3

Gene RTN4R, Length 1,777 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-202ENST00000416372 SNAPC4Q5SXM2 1469 aa28.24■■■□□ 2.11
RTN4R-202ENST00000416372 TRIM26Q12899 539 aaPredicted RBP28.24■■■□□ 2.11
RTN4R-202ENST00000416372 PPARGC1BQ86YN6 1023 aaKnown RBP28.22■■■□□ 2.11
RTN4R-202ENST00000416372 MAGI1Q96QZ7 1491 aaPredicted RBP28.17■■■□□ 2.1
RTN4R-202ENST00000416372 EFCAB5A4FU69 1503 aa28.11■■■□□ 2.09
RTN4R-202ENST00000416372 APLP2Q06481 763 aa28.09■■■□□ 2.09
RTN4R-202ENST00000416372 GRIN2AQ12879 1464 aa28.08■■■□□ 2.09
RTN4R-202ENST00000416372 SYNJ2O15056 1496 aa28.07■■■□□ 2.08
RTN4R-202ENST00000416372 P3H3Q8IVL6 736 aa28.04■■■□□ 2.08
RTN4R-202ENST00000416372 CHMP7Q8WUX9 453 aaPredicted RBP28.04■■■□□ 2.08
RTN4R-202ENST00000416372 IQGAP2Q13576 1575 aa28.03■■■□□ 2.08
RTN4R-202ENST00000416372 TTBK1Q5TCY1 1321 aaPredicted RBP28.01■■■□□ 2.08
RTN4R-202ENST00000416372 FHOD3Q2V2M9 1422 aa28■■■□□ 2.07
RTN4R-202ENST00000416372 SAMD9Q5K651 1589 aa27.99■■■□□ 2.07
RTN4R-202ENST00000416372 FBLN2P98095 1184 aa27.99■■■□□ 2.07
RTN4R-202ENST00000416372 KIAA0586Q9BVV6 1533 aa27.96■■■□□ 2.07
RTN4R-202ENST00000416372 CEP170Q5SW79 1584 aa27.89■■■□□ 2.06
RTN4R-202ENST00000416372 UGGT2Q9NYU1 1516 aa27.87■■■□□ 2.05
RTN4R-202ENST00000416372 FMN1Q68DA7 1419 aa27.87■■■□□ 2.05
RTN4R-202ENST00000416372 PCF11O94913 1555 aaKnown RBP27.86■■■□□ 2.05
RTN4R-202ENST00000416372 NUP160Q12769 1436 aa27.85■■■□□ 2.05
RTN4R-202ENST00000416372 FYCO1Q9BQS8 1478 aa27.81■■■□□ 2.04
RTN4R-202ENST00000416372 CASKIN1Q8WXD9 1431 aa27.81■■■□□ 2.04
RTN4R-202ENST00000416372 MAP3K1Q13233 1512 aa27.79■■■□□ 2.04
RTN4R-202ENST00000416372 ATP1B4Q9UN42 357 aaPredicted RBP27.78■■■□□ 2.04
RTN4R-202ENST00000416372 CHD1O14646 1710 aa27.78■■■□□ 2.04
RTN4R-202ENST00000416372 KANK4Q5T7N3 995 aaPredicted RBP27.78■■■□□ 2.04
RTN4R-202ENST00000416372 TIAM1Q13009 1591 aa27.77■■■□□ 2.04
RTN4R-202ENST00000416372 KIAA0556O60303 1618 aa27.73■■■□□ 2.03
RTN4R-202ENST00000416372 DISP1Q96F81 1524 aa27.73■■■□□ 2.03
RTN4R-202ENST00000416372 CFAP43Q8NDM7 1665 aa27.72■■■□□ 2.03
RTN4R-202ENST00000416372 DNAJC5Q9H3Z4 198 aa27.68■■■□□ 2.02
RTN4R-202ENST00000416372 JPH4Q96JJ6 628 aa27.68■■■□□ 2.02
RTN4R-202ENST00000416372 LRRC9Q6ZRR7 1453 aa27.64■■■□□ 2.02
RTN4R-202ENST00000416372 CARMIL2Q6F5E8 1435 aa27.63■■■□□ 2.01
RTN4R-202ENST00000416372 HECW1Q76N89 1606 aa27.58■■■□□ 2.01
RTN4R-202ENST00000416372 LRRIQ1Q96JM4 1722 aa27.58■■■□□ 2.01
RTN4R-202ENST00000416372 CCDC18Q5T9S5 1454 aa27.53■■■□□ 2
RTN4R-202ENST00000416372 PRG4Q92954 1404 aaPredicted RBP27.5■■□□□ 1.99
RTN4R-202ENST00000416372 RAPGEF6Q8TEU7 1601 aa27.48■■□□□ 1.99
RTN4R-202ENST00000416372 SHROOM2Q13796 1616 aa27.47■■□□□ 1.99
RTN4R-202ENST00000416372 MTUS2Q5JR59 1369 aa27.47■■□□□ 1.99
RTN4R-202ENST00000416372 EPRSP07814 1512 aaKnown RBP27.46■■□□□ 1.99
RTN4R-202ENST00000416372 RRBP1Q9P2E9 1410 aaKnown RBP27.44■■□□□ 1.98
RTN4R-202ENST00000416372 CLASP1Q7Z460 1538 aa27.43■■□□□ 1.98
RTN4R-202ENST00000416372 HRCP23327 699 aa27.43■■□□□ 1.98
RTN4R-202ENST00000416372 CDK13Q14004 1512 aaKnown RBP27.41■■□□□ 1.98
RTN4R-202ENST00000416372 EHBP1L1Q8N3D4 1523 aa27.4■■□□□ 1.98
RTN4R-202ENST00000416372 NUP153P49790 1475 aaKnown RBP27.39■■□□□ 1.98
RTN4R-202ENST00000416372 HNRNPUL2Q1KMD3 747 aaKnown RBP27.39■■□□□ 1.98
RTN4R-202ENST00000416372 PHLDB1Q86UU1 1377 aa27.39■■□□□ 1.98
RTN4R-202ENST00000416372 PLB1Q6P1J6 1458 aa27.39■■□□□ 1.97
RTN4R-202ENST00000416372 CCNB3Q8WWL7 1395 aa27.38■■□□□ 1.97
RTN4R-202ENST00000416372 ARID3CA6NKF2 412 aa27.38■■□□□ 1.97
RTN4R-202ENST00000416372 MAGI3Q5TCQ9 1506 aa27.34■■□□□ 1.97
RTN4R-202ENST00000416372 PTPRGP23470 1445 aa27.34■■□□□ 1.97
RTN4R-202ENST00000416372 SUPT6HQ7KZ85 1726 aaKnown RBP27.34■■□□□ 1.97
RTN4R-202ENST00000416372 ABCA8O94911 1581 aa27.32■■□□□ 1.96
RTN4R-202ENST00000416372 NCOA2Q15596 1464 aa27.3■■□□□ 1.96
RTN4R-202ENST00000416372 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.29■■□□□ 1.96
RTN4R-202ENST00000416372 ERCC6L2Q5T890 1561 aa27.28■■□□□ 1.96
RTN4R-202ENST00000416372 CDK11AQ9UQ88 783 aaPredicted RBP27.26■■□□□ 1.95
RTN4R-202ENST00000416372 ARHGEF11O15085 1522 aa27.22■■□□□ 1.95
RTN4R-202ENST00000416372 FAM50AQ14320 339 aaKnown RBP27.2■■□□□ 1.95
RTN4R-202ENST00000416372 FGD6Q6ZV73 1430 aa27.2■■□□□ 1.94
RTN4R-202ENST00000416372 MYOM3Q5VTT5 1437 aa27.19■■□□□ 1.94
RTN4R-202ENST00000416372 OSCARQ8IYS5 282 aa27.18■■□□□ 1.94
RTN4R-202ENST00000416372 UACAQ9BZF9 1416 aa27.17■■□□□ 1.94
RTN4R-202ENST00000416372 ITGAEP38570 1179 aa27.17■■□□□ 1.94
RTN4R-202ENST00000416372 ATP10BO94823 1461 aa27.16■■□□□ 1.94
RTN4R-202ENST00000416372 TROQ12816 1431 aaPredicted RBP27.15■■□□□ 1.94
RTN4R-202ENST00000416372 CCER1Q8TC90 406 aaPredicted RBP27.14■■□□□ 1.94
RTN4R-202ENST00000416372 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.14■■□□□ 1.94
RTN4R-202ENST00000416372 ZEB1P37275 1124 aaPredicted RBP27.12■■□□□ 1.93
RTN4R-202ENST00000416372 PLEKHD1A6NEE1 506 aa27.09■■□□□ 1.93
RTN4R-202ENST00000416372 ABCC2Q92887 1545 aa27.08■■□□□ 1.93
RTN4R-202ENST00000416372 PTPN23Q9H3S7 1636 aa27.06■■□□□ 1.92
RTN4R-202ENST00000416372 ADCY10Q96PN6 1610 aa27.06■■□□□ 1.92
RTN4R-202ENST00000416372 MIA2Q96PC5 1412 aa27.03■■□□□ 1.92
RTN4R-202ENST00000416372 KIF14Q15058 1648 aa27.01■■□□□ 1.91
RTN4R-202ENST00000416372 UHRF1BP1LA0JNW5 1464 aa27■■□□□ 1.91
RTN4R-202ENST00000416372 TCOF1Q13428 1488 aaKnown RBP27■■□□□ 1.91
RTN4R-202ENST00000416372 ITSN2Q9NZM3 1697 aa26.95■■□□□ 1.9
RTN4R-202ENST00000416372 ZCCHC11Q5TAX3 1644 aaKnown RBP26.91■■□□□ 1.9
RTN4R-202ENST00000416372 GPATCH8Q9UKJ3 1502 aaKnown RBP26.9■■□□□ 1.9
RTN4R-202ENST00000416372 SETD5Q9C0A6 1442 aa26.9■■□□□ 1.9
RTN4R-202ENST00000416372 KDM5BQ9UGL1 1544 aa26.9■■□□□ 1.9
RTN4R-202ENST00000416372 ABCC10Q5T3U5 1492 aa26.89■■□□□ 1.9
RTN4R-202ENST00000416372 CFDP1Q9UEE9 299 aaPredicted RBP26.87■■□□□ 1.89
RTN4R-202ENST00000416372 PTPRKQ15262 1439 aa26.87■■□□□ 1.89
RTN4R-202ENST00000416372 RAB3GAP2Q9H2M9 1393 aa26.87■■□□□ 1.89
RTN4R-202ENST00000416372 CDC42BPAQ5VT25 1732 aa26.84■■□□□ 1.89
RTN4R-202ENST00000416372 ZNF644Q9H582 1327 aaPredicted RBP26.82■■□□□ 1.88
RTN4R-202ENST00000416372 CAMSAP2Q08AD1 1489 aa26.8■■□□□ 1.88
RTN4R-202ENST00000416372 DHX57Q6P158 1386 aaKnown RBP26.79■■□□□ 1.88
RTN4R-202ENST00000416372 ZNF777Q9ULD5 760 aaPredicted RBP26.78■■□□□ 1.88
RTN4R-202ENST00000416372 DNMT1P26358 1616 aaKnown RBP26.77■■□□□ 1.88
RTN4R-202ENST00000416372 HFM1A2PYH4 1435 aa26.77■■□□□ 1.88
RTN4R-202ENST00000416372 DAPK1P53355 1430 aa26.76■■□□□ 1.87
RTN4R-202ENST00000416372 KCNH8Q96L42 1107 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms