RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 RUSC2Q8N2Y8 1516 aa27.38■■□□□ 1.97
DDX56-202ENST00000415758 ABCC10Q5T3U5 1492 aa27.27■■□□□ 1.96
DDX56-202ENST00000415758 IGF1RP08069 1367 aa27.27■■□□□ 1.96
DDX56-202ENST00000415758 NPM1P06748 294 aaKnown RBP eCLIP27.27■■□□□ 1.96
DDX56-202ENST00000415758 MAPKBP1O60336 1514 aa27.26■■□□□ 1.96
DDX56-202ENST00000415758 KIAA0586Q9BVV6 1533 aa27.26■■□□□ 1.96
DDX56-202ENST00000415758 FAM69CQ0P6D2 419 aa27.24■■□□□ 1.95
DDX56-202ENST00000415758 ADCY10Q96PN6 1610 aa27.21■■□□□ 1.95
DDX56-202ENST00000415758 KIF27Q86VH2 1401 aa27.21■■□□□ 1.95
DDX56-202ENST00000415758 CUL7Q14999 1698 aa27.19■■□□□ 1.94
DDX56-202ENST00000415758 DIP2BQ9P265 1576 aa27.17■■□□□ 1.94
DDX56-202ENST00000415758 CARMIL1Q5VZK9 1371 aa27.05■■□□□ 1.92
DDX56-202ENST00000415758 PTPRGP23470 1445 aa27.04■■□□□ 1.92
DDX56-202ENST00000415758 KDM6BO15054 1643 aa26.99■■□□□ 1.91
DDX56-202ENST00000415758 TNIKQ9UKE5 1360 aa26.98■■□□□ 1.91
DDX56-202ENST00000415758 CARMIL2Q6F5E8 1435 aa26.98■■□□□ 1.91
DDX56-202ENST00000415758 TSPOAP1O95153 1857 aa26.95■■□□□ 1.9
DDX56-202ENST00000415758 ABCC2Q92887 1545 aa26.94■■□□□ 1.9
DDX56-202ENST00000415758 IQGAP2Q13576 1575 aa26.92■■□□□ 1.9
DDX56-202ENST00000415758 UHRF1BP1LA0JNW5 1464 aa26.88■■□□□ 1.89
DDX56-202ENST00000415758 KDM4FA0A1W2PPD8 638 aa26.88■■□□□ 1.89
DDX56-202ENST00000415758 PLB1Q6P1J6 1458 aa26.87■■□□□ 1.89
DDX56-202ENST00000415758 TTBK1Q5TCY1 1321 aaPredicted RBP26.87■■□□□ 1.89
DDX56-202ENST00000415758 ASXL2Q76L83 1435 aa26.86■■□□□ 1.89
DDX56-202ENST00000415758 GLI2P10070 1586 aa26.85■■□□□ 1.89
DDX56-202ENST00000415758 DISP1Q96F81 1524 aa26.84■■□□□ 1.89
DDX56-202ENST00000415758 UACAQ9BZF9 1416 aa26.83■■□□□ 1.89
DDX56-202ENST00000415758 PPRC1Q5VV67 1664 aaKnown RBP26.79■■□□□ 1.88
DDX56-202ENST00000415758 UGGT2Q9NYU1 1516 aa26.77■■□□□ 1.88
DDX56-202ENST00000415758 RAPGEF2Q9Y4G8 1499 aa26.77■■□□□ 1.88
DDX56-202ENST00000415758 KDM5BQ9UGL1 1544 aa26.76■■□□□ 1.87
DDX56-202ENST00000415758 EPRSP07814 1512 aaKnown RBP26.7■■□□□ 1.87
DDX56-202ENST00000415758 KIAA0556O60303 1618 aa26.67■■□□□ 1.86
DDX56-202ENST00000415758 MAP3K4Q9Y6R4 1608 aa26.67■■□□□ 1.86
DDX56-202ENST00000415758 ZCCHC11Q5TAX3 1644 aaKnown RBP26.65■■□□□ 1.86
DDX56-202ENST00000415758 COL17A1Q9UMD9 1497 aaPredicted RBP26.65■■□□□ 1.86
DDX56-202ENST00000415758 TEX14Q8IWB6 1497 aa26.62■■□□□ 1.85
DDX56-202ENST00000415758 ADGRL1O94910 1474 aa26.56■■□□□ 1.84
DDX56-202ENST00000415758 WDR7Q9Y4E6 1490 aa26.55■■□□□ 1.84
DDX56-202ENST00000415758 CTTNBP2Q8WZ74 1663 aa26.54■■□□□ 1.84
DDX56-202ENST00000415758 GOLGA3Q08378 1498 aa26.52■■□□□ 1.84
DDX56-202ENST00000415758 ABCA8O94911 1581 aa26.48■■□□□ 1.83
DDX56-202ENST00000415758 MAGI3Q5TCQ9 1506 aa26.45■■□□□ 1.83
DDX56-202ENST00000415758 PRXQ9BXM0 1461 aa26.45■■□□□ 1.82
DDX56-202ENST00000415758 CD109Q6YHK3 1445 aa26.43■■□□□ 1.82
DDX56-202ENST00000415758 CFAP43Q8NDM7 1665 aa26.43■■□□□ 1.82
DDX56-202ENST00000415758 KCNH8Q96L42 1107 aa26.39■■□□□ 1.82
DDX56-202ENST00000415758 ILDR1Q86SU0 546 aaPredicted RBP26.31■■□□□ 1.8
DDX56-202ENST00000415758 FAM9AQ8IZU1 332 aaPredicted RBP26.29■■□□□ 1.8
DDX56-202ENST00000415758 HECW2Q9P2P5 1572 aa26.28■■□□□ 1.8
DDX56-202ENST00000415758 ARAP3Q8WWN8 1544 aa26.26■■□□□ 1.79
DDX56-202ENST00000415758 ATP10BO94823 1461 aa26.26■■□□□ 1.79
DDX56-202ENST00000415758 PHLDB1Q86UU1 1377 aa26.2■■□□□ 1.79
DDX56-202ENST00000415758 P3H3Q8IVL6 736 aa26.2■■□□□ 1.78
DDX56-202ENST00000415758 ABCA9Q8IUA7 1624 aa26.18■■□□□ 1.78
DDX56-202ENST00000415758 SAMD9Q5K651 1589 aa26.17■■□□□ 1.78
DDX56-202ENST00000415758 CSRNP3Q8WYN3 585 aa26.17■■□□□ 1.78
DDX56-202ENST00000415758 ARID3CA6NKF2 412 aa26.16■■□□□ 1.78
DDX56-202ENST00000415758 KIF21BO75037 1637 aa26.16■■□□□ 1.78
DDX56-202ENST00000415758 RAPGEF6Q8TEU7 1601 aa26.11■■□□□ 1.77
DDX56-202ENST00000415758 NEO1Q92859 1461 aa26.09■■□□□ 1.77
DDX56-202ENST00000415758 RAPGEF3O95398 923 aa26.05■■□□□ 1.76
DDX56-202ENST00000415758 NUP153P49790 1475 aaKnown RBP26.03■■□□□ 1.76
DDX56-202ENST00000415758 ADAMTSL3P82987 1691 aa26.03■■□□□ 1.76
DDX56-202ENST00000415758 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.01■■□□□ 1.75
DDX56-202ENST00000415758 EEA1Q15075 1411 aa26.01■■□□□ 1.75
DDX56-202ENST00000415758 HNRNPUL2Q1KMD3 747 aaKnown RBP26.01■■□□□ 1.75
DDX56-202ENST00000415758 PTPRMP28827 1452 aa25.99■■□□□ 1.75
DDX56-202ENST00000415758 FRMPD1Q5SYB0 1578 aa25.97■■□□□ 1.75
DDX56-202ENST00000415758 PLEKHD1A6NEE1 506 aa25.94■■□□□ 1.74
DDX56-202ENST00000415758 FHOD3Q2V2M9 1422 aa25.94■■□□□ 1.74
DDX56-202ENST00000415758 BCORL1Q5H9F3 1711 aa25.93■■□□□ 1.74
DDX56-202ENST00000415758 RANGAP1P46060 587 aaPredicted RBP25.89■■□□□ 1.74
DDX56-202ENST00000415758 DENND4BO75064 1496 aaPredicted RBP25.87■■□□□ 1.73
DDX56-202ENST00000415758 RICTORQ6R327 1708 aa25.87■■□□□ 1.73
DDX56-202ENST00000415758 AKNAQ7Z591 1439 aa25.87■■□□□ 1.73
DDX56-202ENST00000415758 EFCAB5A4FU69 1503 aa25.86■■□□□ 1.73
DDX56-202ENST00000415758 ARID4BQ4LE39 1312 aaPredicted RBP25.86■■□□□ 1.73
DDX56-202ENST00000415758 FANCAO15360 1455 aa25.85■■□□□ 1.73
DDX56-202ENST00000415758 MADDQ8WXG6 1647 aa25.85■■□□□ 1.73
DDX56-202ENST00000415758 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.84■■□□□ 1.73
DDX56-202ENST00000415758 ARHGEF40Q8TER5 1519 aa25.84■■□□□ 1.73
DDX56-202ENST00000415758 CFAP74Q9C0B2 1584 aa25.83■■□□□ 1.73
DDX56-202ENST00000415758 FBXO41Q8TF61 875 aa25.81■■□□□ 1.72
DDX56-202ENST00000415758 PCF11O94913 1555 aaKnown RBP25.79■■□□□ 1.72
DDX56-202ENST00000415758 ZMYM4Q5VZL5 1548 aa25.78■■□□□ 1.72
DDX56-202ENST00000415758 TTC37Q6PGP7 1564 aa25.78■■□□□ 1.72
DDX56-202ENST00000415758 LMTK3Q96Q04 1460 aa25.77■■□□□ 1.72
DDX56-202ENST00000415758 MAGI2Q86UL8 1455 aa25.75■■□□□ 1.71
DDX56-202ENST00000415758 RIMS1Q86UR5 1692 aaKnown RBP25.74■■□□□ 1.71
DDX56-202ENST00000415758 POGZQ7Z3K3 1410 aa25.73■■□□□ 1.71
DDX56-202ENST00000415758 PLCH2O75038 1416 aa25.71■■□□□ 1.71
DDX56-202ENST00000415758 CDK13Q14004 1512 aaKnown RBP25.71■■□□□ 1.71
DDX56-202ENST00000415758 ZFYVE16Q7Z3T8 1539 aa25.71■■□□□ 1.71
DDX56-202ENST00000415758 YEATS2Q9ULM3 1422 aa25.7■■□□□ 1.7
DDX56-202ENST00000415758 SIGLEC1Q9BZZ2 1709 aa25.68■■□□□ 1.7
DDX56-202ENST00000415758 HECW1Q76N89 1606 aa25.67■■□□□ 1.7
DDX56-202ENST00000415758 SCAPERQ9BY12 1400 aa25.66■■□□□ 1.7
DDX56-202ENST00000415758 FMN1Q68DA7 1419 aa25.64■■□□□ 1.7
DDX56-202ENST00000415758 EFCAB2Q5VUJ9 269 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms