RNA–Protein interactions for RNA: ENST00000415332.1

SYNGR1-206, Transcript of synaptogyrin 1, humanhuman

TSL 3

Gene SYNGR1, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-206ENST00000415332 RUSC2Q8N2Y8 1516 aa28.62■■■□□ 2.17
SYNGR1-206ENST00000415332 FAM69CQ0P6D2 419 aa28.54■■■□□ 2.16
SYNGR1-206ENST00000415332 ABCC10Q5T3U5 1492 aa28.53■■■□□ 2.16
SYNGR1-206ENST00000415332 ADCY10Q96PN6 1610 aa28.51■■■□□ 2.15
SYNGR1-206ENST00000415332 DIP2BQ9P265 1576 aa28.49■■■□□ 2.15
SYNGR1-206ENST00000415332 MAPKBP1O60336 1514 aa28.48■■■□□ 2.15
SYNGR1-206ENST00000415332 NPM1P06748 294 aaKnown RBP eCLIP28.46■■■□□ 2.15
SYNGR1-206ENST00000415332 TSPOAP1O95153 1857 aa28.41■■■□□ 2.14
SYNGR1-206ENST00000415332 KIAA0586Q9BVV6 1533 aa28.38■■■□□ 2.13
SYNGR1-206ENST00000415332 IGF1RP08069 1367 aa28.37■■■□□ 2.13
SYNGR1-206ENST00000415332 KDM6BO15054 1643 aa28.34■■■□□ 2.13
SYNGR1-206ENST00000415332 CUL7Q14999 1698 aa28.31■■■□□ 2.12
SYNGR1-206ENST00000415332 KDM4FA0A1W2PPD8 638 aa28.28■■■□□ 2.12
SYNGR1-206ENST00000415332 KIF27Q86VH2 1401 aa28.27■■■□□ 2.12
SYNGR1-206ENST00000415332 TTBK1Q5TCY1 1321 aaPredicted RBP28.22■■■□□ 2.11
SYNGR1-206ENST00000415332 PTPRGP23470 1445 aa28.2■■■□□ 2.11
SYNGR1-206ENST00000415332 CARMIL1Q5VZK9 1371 aa28.15■■■□□ 2.1
SYNGR1-206ENST00000415332 PPRC1Q5VV67 1664 aaKnown RBP28.13■■■□□ 2.09
SYNGR1-206ENST00000415332 ABCC2Q92887 1545 aa28.12■■■□□ 2.09
SYNGR1-206ENST00000415332 TNIKQ9UKE5 1360 aa28.11■■■□□ 2.09
SYNGR1-206ENST00000415332 CARMIL2Q6F5E8 1435 aa28.08■■■□□ 2.09
SYNGR1-206ENST00000415332 ASXL2Q76L83 1435 aa28.08■■■□□ 2.09
SYNGR1-206ENST00000415332 IQGAP2Q13576 1575 aa28.07■■■□□ 2.08
SYNGR1-206ENST00000415332 GLI2P10070 1586 aa28.05■■■□□ 2.08
SYNGR1-206ENST00000415332 PLB1Q6P1J6 1458 aa28.02■■■□□ 2.08
SYNGR1-206ENST00000415332 UHRF1BP1LA0JNW5 1464 aa28.01■■■□□ 2.07
SYNGR1-206ENST00000415332 DISP1Q96F81 1524 aa28■■■□□ 2.07
SYNGR1-206ENST00000415332 UACAQ9BZF9 1416 aa27.99■■■□□ 2.07
SYNGR1-206ENST00000415332 COL17A1Q9UMD9 1497 aaPredicted RBP27.95■■■□□ 2.07
SYNGR1-206ENST00000415332 MAP3K4Q9Y6R4 1608 aa27.92■■■□□ 2.06
SYNGR1-206ENST00000415332 ADGRL1O94910 1474 aa27.92■■■□□ 2.06
SYNGR1-206ENST00000415332 EPRSP07814 1512 aaKnown RBP27.92■■■□□ 2.06
SYNGR1-206ENST00000415332 ZCCHC11Q5TAX3 1644 aaKnown RBP27.91■■■□□ 2.06
SYNGR1-206ENST00000415332 KDM5BQ9UGL1 1544 aa27.91■■■□□ 2.06
SYNGR1-206ENST00000415332 UGGT2Q9NYU1 1516 aa27.87■■■□□ 2.05
SYNGR1-206ENST00000415332 ILDR1Q86SU0 546 aaPredicted RBP27.85■■■□□ 2.05
SYNGR1-206ENST00000415332 KIAA0556O60303 1618 aa27.85■■■□□ 2.05
SYNGR1-206ENST00000415332 RAPGEF2Q9Y4G8 1499 aa27.83■■■□□ 2.05
SYNGR1-206ENST00000415332 TEX14Q8IWB6 1497 aa27.78■■■□□ 2.04
SYNGR1-206ENST00000415332 WDR7Q9Y4E6 1490 aa27.72■■■□□ 2.03
SYNGR1-206ENST00000415332 CTTNBP2Q8WZ74 1663 aa27.71■■■□□ 2.03
SYNGR1-206ENST00000415332 HECW2Q9P2P5 1572 aa27.69■■■□□ 2.02
SYNGR1-206ENST00000415332 CFAP43Q8NDM7 1665 aa27.63■■■□□ 2.01
SYNGR1-206ENST00000415332 ABCA8O94911 1581 aa27.63■■■□□ 2.01
SYNGR1-206ENST00000415332 KCNH8Q96L42 1107 aa27.61■■■□□ 2.01
SYNGR1-206ENST00000415332 CD109Q6YHK3 1445 aa27.6■■■□□ 2.01
SYNGR1-206ENST00000415332 MAGI3Q5TCQ9 1506 aa27.59■■■□□ 2.01
SYNGR1-206ENST00000415332 GOLGA3Q08378 1498 aa27.56■■■□□ 2
SYNGR1-206ENST00000415332 KIF21BO75037 1637 aa27.52■■■□□ 2
SYNGR1-206ENST00000415332 PRXQ9BXM0 1461 aa27.45■■□□□ 1.99
SYNGR1-206ENST00000415332 ARID3CA6NKF2 412 aa27.45■■□□□ 1.98
SYNGR1-206ENST00000415332 ATP10BO94823 1461 aa27.39■■□□□ 1.98
SYNGR1-206ENST00000415332 P3H3Q8IVL6 736 aa27.39■■□□□ 1.98
SYNGR1-206ENST00000415332 ARAP3Q8WWN8 1544 aa27.39■■□□□ 1.98
SYNGR1-206ENST00000415332 ABCA9Q8IUA7 1624 aa27.34■■□□□ 1.97
SYNGR1-206ENST00000415332 ADAMTSL3P82987 1691 aa27.3■■□□□ 1.96
SYNGR1-206ENST00000415332 RAPGEF3O95398 923 aa27.26■■□□□ 1.95
SYNGR1-206ENST00000415332 SAMD9Q5K651 1589 aa27.26■■□□□ 1.95
SYNGR1-206ENST00000415332 PTPRMP28827 1452 aa27.25■■□□□ 1.95
SYNGR1-206ENST00000415332 RAPGEF6Q8TEU7 1601 aa27.24■■□□□ 1.95
SYNGR1-206ENST00000415332 FRMPD1Q5SYB0 1578 aa27.22■■□□□ 1.95
SYNGR1-206ENST00000415332 PHLDB1Q86UU1 1377 aa27.22■■□□□ 1.95
SYNGR1-206ENST00000415332 FAM9AQ8IZU1 332 aaPredicted RBP27.21■■□□□ 1.95
SYNGR1-206ENST00000415332 BCORL1Q5H9F3 1711 aa27.19■■□□□ 1.94
SYNGR1-206ENST00000415332 NEO1Q92859 1461 aa27.19■■□□□ 1.94
SYNGR1-206ENST00000415332 MADDQ8WXG6 1647 aa27.16■■□□□ 1.94
SYNGR1-206ENST00000415332 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.16■■□□□ 1.94
SYNGR1-206ENST00000415332 HNRNPUL2Q1KMD3 747 aaKnown RBP27.16■■□□□ 1.94
SYNGR1-206ENST00000415332 NUP153P49790 1475 aaKnown RBP27.13■■□□□ 1.93
SYNGR1-206ENST00000415332 FBXO41Q8TF61 875 aa27.13■■□□□ 1.93
SYNGR1-206ENST00000415332 CSRNP3Q8WYN3 585 aa27.12■■□□□ 1.93
SYNGR1-206ENST00000415332 ARID4BQ4LE39 1312 aaPredicted RBP27.1■■□□□ 1.93
SYNGR1-206ENST00000415332 RANGAP1P46060 587 aaPredicted RBP27.09■■□□□ 1.93
SYNGR1-206ENST00000415332 RICTORQ6R327 1708 aa27.07■■□□□ 1.92
SYNGR1-206ENST00000415332 FHOD3Q2V2M9 1422 aa27.07■■□□□ 1.92
SYNGR1-206ENST00000415332 PCF11O94913 1555 aaKnown RBP27.06■■□□□ 1.92
SYNGR1-206ENST00000415332 RIMS1Q86UR5 1692 aaKnown RBP27.06■■□□□ 1.92
SYNGR1-206ENST00000415332 LMTK3Q96Q04 1460 aa27.05■■□□□ 1.92
SYNGR1-206ENST00000415332 ARHGEF40Q8TER5 1519 aa27.04■■□□□ 1.92
SYNGR1-206ENST00000415332 DENND4BO75064 1496 aaPredicted RBP27■■□□□ 1.91
SYNGR1-206ENST00000415332 SIGLEC1Q9BZZ2 1709 aa27■■□□□ 1.91
SYNGR1-206ENST00000415332 AKNAQ7Z591 1439 aa26.99■■□□□ 1.91
SYNGR1-206ENST00000415332 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.99■■□□□ 1.91
SYNGR1-206ENST00000415332 PLEKHD1A6NEE1 506 aa26.98■■□□□ 1.91
SYNGR1-206ENST00000415332 TTC37Q6PGP7 1564 aa26.97■■□□□ 1.91
SYNGR1-206ENST00000415332 FANCAO15360 1455 aa26.96■■□□□ 1.91
SYNGR1-206ENST00000415332 CFAP74Q9C0B2 1584 aa26.94■■□□□ 1.9
SYNGR1-206ENST00000415332 PLPPR3Q6T4P5 718 aa26.93■■□□□ 1.9
SYNGR1-206ENST00000415332 HSPA2P54652 639 aa26.92■■□□□ 1.9
SYNGR1-206ENST00000415332 YEATS2Q9ULM3 1422 aa26.91■■□□□ 1.9
SYNGR1-206ENST00000415332 ZMYM4Q5VZL5 1548 aa26.9■■□□□ 1.9
SYNGR1-206ENST00000415332 ZFYVE16Q7Z3T8 1539 aa26.88■■□□□ 1.89
SYNGR1-206ENST00000415332 CDK13Q14004 1512 aaKnown RBP26.86■■□□□ 1.89
SYNGR1-206ENST00000415332 EEA1Q15075 1411 aa26.86■■□□□ 1.89
SYNGR1-206ENST00000415332 HECW1Q76N89 1606 aa26.86■■□□□ 1.89
SYNGR1-206ENST00000415332 EFCAB5A4FU69 1503 aa26.85■■□□□ 1.89
SYNGR1-206ENST00000415332 FER1L4A9Z1Z3 1794 aa26.84■■□□□ 1.89
SYNGR1-206ENST00000415332 POGZQ7Z3K3 1410 aa26.83■■□□□ 1.89
SYNGR1-206ENST00000415332 MLECQ14165 292 aa26.83■■□□□ 1.89
SYNGR1-206ENST00000415332 MAGI2Q86UL8 1455 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms