RNA–Protein interactions for RNA: ENST00000413587.5

ERGIC3-205, Transcript of ERGIC and golgi 3, humanhuman

TSL 5

Gene ERGIC3, Length 977 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-205ENST00000413587 JPH4Q96JJ6 628 aa20.5■□□□□ 0.87
ERGIC3-205ENST00000413587 RUSC2Q8N2Y8 1516 aa20.47■□□□□ 0.87
ERGIC3-205ENST00000413587 CARMIL1Q5VZK9 1371 aa20.42■□□□□ 0.86
ERGIC3-205ENST00000413587 CUL7Q14999 1698 aa20.39■□□□□ 0.86
ERGIC3-205ENST00000413587 KIF13AQ9H1H9 1805 aa20.39■□□□□ 0.85
ERGIC3-205ENST00000413587 AEBP2Q6ZN18 517 aaPredicted RBP20.35■□□□□ 0.85
ERGIC3-205ENST00000413587 KIAA0586Q9BVV6 1533 aa20.35■□□□□ 0.85
ERGIC3-205ENST00000413587 ADCY10Q96PN6 1610 aa20.31■□□□□ 0.84
ERGIC3-205ENST00000413587 ABCC10Q5T3U5 1492 aa20.3■□□□□ 0.84
ERGIC3-205ENST00000413587 MAPKBP1O60336 1514 aa20.3■□□□□ 0.84
ERGIC3-205ENST00000413587 FAM69CQ0P6D2 419 aa20.27■□□□□ 0.84
ERGIC3-205ENST00000413587 RAPGEF2Q9Y4G8 1499 aa20.25■□□□□ 0.83
ERGIC3-205ENST00000413587 DIP2BQ9P265 1576 aa20.25■□□□□ 0.83
ERGIC3-205ENST00000413587 NPM1P06748 294 aaKnown RBP eCLIP20.24■□□□□ 0.83
ERGIC3-205ENST00000413587 PRXQ9BXM0 1461 aa20.22■□□□□ 0.83
ERGIC3-205ENST00000413587 PTPRGP23470 1445 aa20.18■□□□□ 0.82
ERGIC3-205ENST00000413587 CSRNP3Q8WYN3 585 aa20.14■□□□□ 0.81
ERGIC3-205ENST00000413587 IQGAP2Q13576 1575 aa20.13■□□□□ 0.81
ERGIC3-205ENST00000413587 TNIKQ9UKE5 1360 aa20.12■□□□□ 0.81
ERGIC3-205ENST00000413587 CARMIL2Q6F5E8 1435 aa20.1■□□□□ 0.81
ERGIC3-205ENST00000413587 ABCC2Q92887 1545 aa20.1■□□□□ 0.81
ERGIC3-205ENST00000413587 DISP1Q96F81 1524 aa20.1■□□□□ 0.81
ERGIC3-205ENST00000413587 TTBK1Q5TCY1 1321 aaPredicted RBP20.09■□□□□ 0.81
ERGIC3-205ENST00000413587 UGGT2Q9NYU1 1516 aa20.08■□□□□ 0.81
ERGIC3-205ENST00000413587 EEA1Q15075 1411 aa20.07■□□□□ 0.8
ERGIC3-205ENST00000413587 KDM6BO15054 1643 aa20.05■□□□□ 0.8
ERGIC3-205ENST00000413587 UHRF1BP1LA0JNW5 1464 aa20.05■□□□□ 0.8
ERGIC3-205ENST00000413587 ASXL2Q76L83 1435 aa20.04■□□□□ 0.8
ERGIC3-205ENST00000413587 TSPOAP1O95153 1857 aa20.04■□□□□ 0.8
ERGIC3-205ENST00000413587 UACAQ9BZF9 1416 aa20.02■□□□□ 0.8
ERGIC3-205ENST00000413587 FAM9AQ8IZU1 332 aaPredicted RBP20.01■□□□□ 0.79
ERGIC3-205ENST00000413587 PLB1Q6P1J6 1458 aa20■□□□□ 0.79
ERGIC3-205ENST00000413587 KDM4FA0A1W2PPD8 638 aa20■□□□□ 0.79
ERGIC3-205ENST00000413587 GLI2P10070 1586 aa20■□□□□ 0.79
ERGIC3-205ENST00000413587 CTTNBP2Q8WZ74 1663 aa19.98■□□□□ 0.79
ERGIC3-205ENST00000413587 PPRC1Q5VV67 1664 aaKnown RBP19.97■□□□□ 0.79
ERGIC3-205ENST00000413587 KDM5BQ9UGL1 1544 aa19.97■□□□□ 0.79
ERGIC3-205ENST00000413587 KIAA0556O60303 1618 aa19.96■□□□□ 0.79
ERGIC3-205ENST00000413587 EPRSP07814 1512 aaKnown RBP19.92■□□□□ 0.78
ERGIC3-205ENST00000413587 COL17A1Q9UMD9 1497 aaPredicted RBP19.91■□□□□ 0.78
ERGIC3-205ENST00000413587 KIF21BO75037 1637 aa19.89■□□□□ 0.77
ERGIC3-205ENST00000413587 ZCCHC11Q5TAX3 1644 aaKnown RBP19.89■□□□□ 0.77
ERGIC3-205ENST00000413587 GOLGA3Q08378 1498 aa19.88■□□□□ 0.77
ERGIC3-205ENST00000413587 MAP3K4Q9Y6R4 1608 aa19.87■□□□□ 0.77
ERGIC3-205ENST00000413587 WDR7Q9Y4E6 1490 aa19.82■□□□□ 0.76
ERGIC3-205ENST00000413587 SAMD9Q5K651 1589 aa19.82■□□□□ 0.76
ERGIC3-205ENST00000413587 P3H3Q8IVL6 736 aa19.81■□□□□ 0.76
ERGIC3-205ENST00000413587 TEX14Q8IWB6 1497 aa19.79■□□□□ 0.76
ERGIC3-205ENST00000413587 ABCA8O94911 1581 aa19.79■□□□□ 0.76
ERGIC3-205ENST00000413587 ADGRL1O94910 1474 aa19.77■□□□□ 0.76
ERGIC3-205ENST00000413587 EHMT2Q96KQ7 1210 aa19.75■□□□□ 0.75
ERGIC3-205ENST00000413587 RANGAP1P46060 587 aaPredicted RBP19.72■□□□□ 0.75
ERGIC3-205ENST00000413587 MAGI3Q5TCQ9 1506 aa19.71■□□□□ 0.75
ERGIC3-205ENST00000413587 FHOD3Q2V2M9 1422 aa19.7■□□□□ 0.74
ERGIC3-205ENST00000413587 CD109Q6YHK3 1445 aa19.7■□□□□ 0.74
ERGIC3-205ENST00000413587 UBTFP17480 764 aaKnown RBP19.7■□□□□ 0.74
ERGIC3-205ENST00000413587 KCNH8Q96L42 1107 aa19.68■□□□□ 0.74
ERGIC3-205ENST00000413587 CFAP43Q8NDM7 1665 aa19.66■□□□□ 0.74
ERGIC3-205ENST00000413587 ATP10BO94823 1461 aa19.66■□□□□ 0.74
ERGIC3-205ENST00000413587 EFCAB5A4FU69 1503 aa19.65■□□□□ 0.74
ERGIC3-205ENST00000413587 LOC105371045A0A1W2PR82 267 aa19.64■□□□□ 0.73
ERGIC3-205ENST00000413587 ARHGAP35Q9NRY4 1499 aa19.63■□□□□ 0.73
ERGIC3-205ENST00000413587 NUP153P49790 1475 aaKnown RBP19.61■□□□□ 0.73
ERGIC3-205ENST00000413587 ARID3CA6NKF2 412 aa19.61■□□□□ 0.73
ERGIC3-205ENST00000413587 RAPGEF6Q8TEU7 1601 aa19.6■□□□□ 0.73
ERGIC3-205ENST00000413587 ARAP3Q8WWN8 1544 aa19.56■□□□□ 0.72
ERGIC3-205ENST00000413587 ABCA9Q8IUA7 1624 aa19.54■□□□□ 0.72
ERGIC3-205ENST00000413587 HECW2Q9P2P5 1572 aa19.53■□□□□ 0.72
ERGIC3-205ENST00000413587 ILDR1Q86SU0 546 aaPredicted RBP19.48■□□□□ 0.71
ERGIC3-205ENST00000413587 FMN1Q68DA7 1419 aa19.48■□□□□ 0.71
ERGIC3-205ENST00000413587 PHLDB1Q86UU1 1377 aa19.47■□□□□ 0.71
ERGIC3-205ENST00000413587 NEO1Q92859 1461 aa19.44■□□□□ 0.7
ERGIC3-205ENST00000413587 RAPGEF3O95398 923 aa19.44■□□□□ 0.7
ERGIC3-205ENST00000413587 CDK13Q14004 1512 aaKnown RBP19.43■□□□□ 0.7
ERGIC3-205ENST00000413587 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.43■□□□□ 0.7
ERGIC3-205ENST00000413587 HNRNPUL2Q1KMD3 747 aaKnown RBP19.43■□□□□ 0.7
ERGIC3-205ENST00000413587 CLIP1P30622 1438 aa19.42■□□□□ 0.7
ERGIC3-205ENST00000413587 FRMPD1Q5SYB0 1578 aa19.41■□□□□ 0.7
ERGIC3-205ENST00000413587 PLEKHD1A6NEE1 506 aa19.4■□□□□ 0.7
ERGIC3-205ENST00000413587 ADAMTSL3P82987 1691 aa19.37■□□□□ 0.69
ERGIC3-205ENST00000413587 HECW1Q76N89 1606 aa19.36■□□□□ 0.69
ERGIC3-205ENST00000413587 CASKIN1Q8WXD9 1431 aa19.36■□□□□ 0.69
ERGIC3-205ENST00000413587 ATP1B4Q9UN42 357 aaPredicted RBP19.35■□□□□ 0.69
ERGIC3-205ENST00000413587 PTPRMP28827 1452 aa19.35■□□□□ 0.69
ERGIC3-205ENST00000413587 LRRIQ1Q96JM4 1722 aa19.34■□□□□ 0.69
ERGIC3-205ENST00000413587 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.33■□□□□ 0.68
ERGIC3-205ENST00000413587 PCF11O94913 1555 aaKnown RBP19.32■□□□□ 0.68
ERGIC3-205ENST00000413587 CEP162Q5TB80 1403 aa19.31■□□□□ 0.68
ERGIC3-205ENST00000413587 AKNAQ7Z591 1439 aa19.3■□□□□ 0.68
ERGIC3-205ENST00000413587 BCORL1Q5H9F3 1711 aa19.3■□□□□ 0.68
ERGIC3-205ENST00000413587 FANCAO15360 1455 aa19.29■□□□□ 0.68
ERGIC3-205ENST00000413587 DENND4BO75064 1496 aaPredicted RBP19.29■□□□□ 0.68
ERGIC3-205ENST00000413587 TTC37Q6PGP7 1564 aa19.29■□□□□ 0.68
ERGIC3-205ENST00000413587 ARHGEF40Q8TER5 1519 aa19.29■□□□□ 0.68
ERGIC3-205ENST00000413587 RICTORQ6R327 1708 aa19.28■□□□□ 0.68
ERGIC3-205ENST00000413587 FYCO1Q9BQS8 1478 aa19.27■□□□□ 0.67
ERGIC3-205ENST00000413587 TROQ12816 1431 aaPredicted RBP19.26■□□□□ 0.67
ERGIC3-205ENST00000413587 MADDQ8WXG6 1647 aa19.26■□□□□ 0.67
ERGIC3-205ENST00000413587 CDK11AQ9UQ88 783 aaPredicted RBP19.25■□□□□ 0.67
ERGIC3-205ENST00000413587 ARID4BQ4LE39 1312 aaPredicted RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms