RNA–Protein interactions for RNA: ENST00000413170.1

PCCA-204, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 397 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-204ENST00000413170 WRNQ14191 1432 aaPredicted RBP eCLIP23.42■■□□□ 1.34
PCCA-204ENST00000413170 KDM6BO15054 1643 aa23.39■■□□□ 1.33
PCCA-204ENST00000413170 DIP2BQ9P265 1576 aa23.39■■□□□ 1.33
PCCA-204ENST00000413170 NPM1P06748 294 aaKnown RBP eCLIP23.37■■□□□ 1.33
PCCA-204ENST00000413170 MAPKBP1O60336 1514 aa23.36■■□□□ 1.33
PCCA-204ENST00000413170 JPH4Q96JJ6 628 aa23.35■■□□□ 1.33
PCCA-204ENST00000413170 ERICH3Q5RHP9 1530 aa23.32■■□□□ 1.32
PCCA-204ENST00000413170 ADCY10Q96PN6 1610 aa23.3■■□□□ 1.32
PCCA-204ENST00000413170 PHF23Q9BUL5 403 aaPredicted RBP23.28■■□□□ 1.32
PCCA-204ENST00000413170 TSPOAP1O95153 1857 aa23.27■■□□□ 1.32
PCCA-204ENST00000413170 RUSC2Q8N2Y8 1516 aa23.26■■□□□ 1.31
PCCA-204ENST00000413170 TOP2BQ02880 1626 aa23.23■■□□□ 1.31
PCCA-204ENST00000413170 BIVM-ERCC5R4GMW8 1640 aa23.23■■□□□ 1.31
PCCA-204ENST00000413170 ADGRL1O94910 1474 aa23.15■■□□□ 1.3
PCCA-204ENST00000413170 HECW2Q9P2P5 1572 aa23.06■■□□□ 1.28
PCCA-204ENST00000413170 TTBK1Q5TCY1 1321 aaPredicted RBP23.04■■□□□ 1.28
PCCA-204ENST00000413170 KIAA0586Q9BVV6 1533 aa23.03■■□□□ 1.28
PCCA-204ENST00000413170 PPRC1Q5VV67 1664 aaKnown RBP23.01■■□□□ 1.27
PCCA-204ENST00000413170 PTPRGP23470 1445 aa22.99■■□□□ 1.27
PCCA-204ENST00000413170 SUPT5HO00267 1087 aaKnown RBP22.98■■□□□ 1.27
PCCA-204ENST00000413170 ASXL2Q76L83 1435 aa22.98■■□□□ 1.27
PCCA-204ENST00000413170 ABCC2Q92887 1545 aa22.96■■□□□ 1.27
PCCA-204ENST00000413170 GLI2P10070 1586 aa22.93■■□□□ 1.26
PCCA-204ENST00000413170 PLB1Q6P1J6 1458 aa22.93■■□□□ 1.26
PCCA-204ENST00000413170 COL17A1Q9UMD9 1497 aaPredicted RBP22.93■■□□□ 1.26
PCCA-204ENST00000413170 TNIKQ9UKE5 1360 aa22.88■■□□□ 1.25
PCCA-204ENST00000413170 CUL7Q14999 1698 aa22.87■■□□□ 1.25
PCCA-204ENST00000413170 IGF1RP08069 1367 aa22.86■■□□□ 1.25
PCCA-204ENST00000413170 CARMIL2Q6F5E8 1435 aa22.83■■□□□ 1.25
PCCA-204ENST00000413170 EPRSP07814 1512 aaKnown RBP22.82■■□□□ 1.24
PCCA-204ENST00000413170 MAP3K4Q9Y6R4 1608 aa22.81■■□□□ 1.24
PCCA-204ENST00000413170 TEX14Q8IWB6 1497 aa22.8■■□□□ 1.24
PCCA-204ENST00000413170 UHRF1BP1LA0JNW5 1464 aa22.79■■□□□ 1.24
PCCA-204ENST00000413170 UACAQ9BZF9 1416 aa22.78■■□□□ 1.24
PCCA-204ENST00000413170 KIF27Q86VH2 1401 aa22.77■■□□□ 1.24
PCCA-204ENST00000413170 FBXO41Q8TF61 875 aa22.77■■□□□ 1.24
PCCA-204ENST00000413170 IQGAP2Q13576 1575 aa22.72■■□□□ 1.23
PCCA-204ENST00000413170 KDM5BQ9UGL1 1544 aa22.71■■□□□ 1.23
PCCA-204ENST00000413170 CARMIL1Q5VZK9 1371 aa22.7■■□□□ 1.22
PCCA-204ENST00000413170 ZCCHC11Q5TAX3 1644 aaKnown RBP22.69■■□□□ 1.22
PCCA-204ENST00000413170 DISP1Q96F81 1524 aa22.67■■□□□ 1.22
PCCA-204ENST00000413170 WDR7Q9Y4E6 1490 aa22.62■■□□□ 1.21
PCCA-204ENST00000413170 KIF21BO75037 1637 aa22.6■■□□□ 1.21
PCCA-204ENST00000413170 CD109Q6YHK3 1445 aa22.56■■□□□ 1.2
PCCA-204ENST00000413170 MAGI3Q5TCQ9 1506 aa22.54■■□□□ 1.2
PCCA-204ENST00000413170 KIAA0556O60303 1618 aa22.53■■□□□ 1.2
PCCA-204ENST00000413170 UGGT2Q9NYU1 1516 aa22.52■■□□□ 1.2
PCCA-204ENST00000413170 KCNH8Q96L42 1107 aa22.51■■□□□ 1.19
PCCA-204ENST00000413170 CFAP43Q8NDM7 1665 aa22.5■■□□□ 1.19
PCCA-204ENST00000413170 PTPRMP28827 1452 aa22.47■■□□□ 1.19
PCCA-204ENST00000413170 LMTK3Q96Q04 1460 aa22.43■■□□□ 1.18
PCCA-204ENST00000413170 RAPGEF2Q9Y4G8 1499 aa22.41■■□□□ 1.18
PCCA-204ENST00000413170 ADAMTSL3P82987 1691 aa22.4■■□□□ 1.18
PCCA-204ENST00000413170 PCF11O94913 1555 aaKnown RBP22.39■■□□□ 1.18
PCCA-204ENST00000413170 ARAP3Q8WWN8 1544 aa22.38■■□□□ 1.17
PCCA-204ENST00000413170 ABCA8O94911 1581 aa22.36■■□□□ 1.17
PCCA-204ENST00000413170 MADDQ8WXG6 1647 aa22.32■■□□□ 1.16
PCCA-204ENST00000413170 ARID3CA6NKF2 412 aa22.31■■□□□ 1.16
PCCA-204ENST00000413170 ARID4BQ4LE39 1312 aaPredicted RBP22.31■■□□□ 1.16
PCCA-204ENST00000413170 BCORL1Q5H9F3 1711 aa22.29■■□□□ 1.16
PCCA-204ENST00000413170 RAPGEF3O95398 923 aa22.29■■□□□ 1.16
PCCA-204ENST00000413170 GOLGA3Q08378 1498 aa22.28■■□□□ 1.16
PCCA-204ENST00000413170 HSPA2P54652 639 aa22.25■■□□□ 1.15
PCCA-204ENST00000413170 CTTNBP2Q8WZ74 1663 aa22.25■■□□□ 1.15
PCCA-204ENST00000413170 PHLDB1Q86UU1 1377 aa22.22■■□□□ 1.15
PCCA-204ENST00000413170 RIMS1Q86UR5 1692 aaKnown RBP22.21■■□□□ 1.15
PCCA-204ENST00000413170 PLPPR3Q6T4P5 718 aa22.21■■□□□ 1.15
PCCA-204ENST00000413170 FRMPD1Q5SYB0 1578 aa22.21■■□□□ 1.15
PCCA-204ENST00000413170 ABCA9Q8IUA7 1624 aa22.2■■□□□ 1.15
PCCA-204ENST00000413170 ILDR2Q71H61 639 aa22.2■■□□□ 1.14
PCCA-204ENST00000413170 CERKQ8TCT0 537 aa22.2■■□□□ 1.14
PCCA-204ENST00000413170 DISP3Q9P2K9 1392 aa22.19■■□□□ 1.14
PCCA-204ENST00000413170 ATP10BO94823 1461 aa22.17■■□□□ 1.14
PCCA-204ENST00000413170 NEO1Q92859 1461 aa22.16■■□□□ 1.14
PCCA-204ENST00000413170 SOCS7O14512 581 aa22.15■■□□□ 1.14
PCCA-204ENST00000413170 ARHGEF40Q8TER5 1519 aa22.14■■□□□ 1.13
PCCA-204ENST00000413170 P3H3Q8IVL6 736 aa22.11■■□□□ 1.13
PCCA-204ENST00000413170 FAM9AQ8IZU1 332 aaPredicted RBP22.07■■□□□ 1.12
PCCA-204ENST00000413170 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.05■■□□□ 1.12
PCCA-204ENST00000413170 HNRNPUL2Q1KMD3 747 aaKnown RBP22.05■■□□□ 1.12
PCCA-204ENST00000413170 DENND4BO75064 1496 aaPredicted RBP22.03■■□□□ 1.12
PCCA-204ENST00000413170 POGZQ7Z3K3 1410 aa22.03■■□□□ 1.12
PCCA-204ENST00000413170 FANCAO15360 1455 aa22.03■■□□□ 1.12
PCCA-204ENST00000413170 RICTORQ6R327 1708 aa22.01■■□□□ 1.11
PCCA-204ENST00000413170 AKNAQ7Z591 1439 aa22■■□□□ 1.11
PCCA-204ENST00000413170 MLECQ14165 292 aa22■■□□□ 1.11
PCCA-204ENST00000413170 SIGLEC1Q9BZZ2 1709 aa22■■□□□ 1.11
PCCA-204ENST00000413170 RAPGEF6Q8TEU7 1601 aa21.98■■□□□ 1.11
PCCA-204ENST00000413170 SPATA31D1Q6ZQQ2 1576 aa21.98■■□□□ 1.11
PCCA-204ENST00000413170 FHOD3Q2V2M9 1422 aa21.97■■□□□ 1.11
PCCA-204ENST00000413170 PRXQ9BXM0 1461 aa21.97■■□□□ 1.11
PCCA-204ENST00000413170 FOXD1Q16676 465 aa21.97■■□□□ 1.11
PCCA-204ENST00000413170 YEATS2Q9ULM3 1422 aa21.97■■□□□ 1.11
PCCA-204ENST00000413170 ZFYVE16Q7Z3T8 1539 aa21.96■■□□□ 1.11
PCCA-204ENST00000413170 FER1L4A9Z1Z3 1794 aa21.94■■□□□ 1.1
PCCA-204ENST00000413170 TTC37Q6PGP7 1564 aa21.94■■□□□ 1.1
PCCA-204ENST00000413170 ZMYM4Q5VZL5 1548 aa21.93■■□□□ 1.1
PCCA-204ENST00000413170 EFCAB5A4FU69 1503 aa21.92■■□□□ 1.1
PCCA-204ENST00000413170 NUP153P49790 1475 aaKnown RBP21.92■■□□□ 1.1
PCCA-204ENST00000413170 CFAP74Q9C0B2 1584 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms