RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 CARMIL1Q5VZK9 1371 aa22.3■■□□□ 1.16
SSB-203ENST00000413002 CUL7Q14999 1698 aa22.25■■□□□ 1.15
SSB-203ENST00000413002 ERCC6L2Q5T890 1561 aa22.25■■□□□ 1.15
SSB-203ENST00000413002 JPH4Q96JJ6 628 aa22.21■■□□□ 1.15
SSB-203ENST00000413002 PRG4Q92954 1404 aaPredicted RBP22.16■■□□□ 1.14
SSB-203ENST00000413002 SHROOM2Q13796 1616 aa22.16■■□□□ 1.14
SSB-203ENST00000413002 KIAA0586Q9BVV6 1533 aa22.14■■□□□ 1.13
SSB-203ENST00000413002 RAPGEF2Q9Y4G8 1499 aa22.12■■□□□ 1.13
SSB-203ENST00000413002 FAM9AQ8IZU1 332 aaPredicted RBP22.1■■□□□ 1.13
SSB-203ENST00000413002 CSRNP3Q8WYN3 585 aa22.04■■□□□ 1.12
SSB-203ENST00000413002 TTBK1Q5TCY1 1321 aaPredicted RBP22.02■■□□□ 1.12
SSB-203ENST00000413002 PRXQ9BXM0 1461 aa22.02■■□□□ 1.12
SSB-203ENST00000413002 TRHP20396 242 aaPredicted RBP21.98■■□□□ 1.11
SSB-203ENST00000413002 IQGAP2Q13576 1575 aa21.98■■□□□ 1.11
SSB-203ENST00000413002 EEA1Q15075 1411 aa21.92■■□□□ 1.1
SSB-203ENST00000413002 CARMIL2Q6F5E8 1435 aa21.9■■□□□ 1.1
SSB-203ENST00000413002 EHMT2Q96KQ7 1210 aa21.9■■□□□ 1.1
SSB-203ENST00000413002 PTPRGP23470 1445 aa21.89■■□□□ 1.09
SSB-203ENST00000413002 DISP1Q96F81 1524 aa21.88■■□□□ 1.09
SSB-203ENST00000413002 TNIKQ9UKE5 1360 aa21.86■■□□□ 1.09
SSB-203ENST00000413002 UGGT2Q9NYU1 1516 aa21.85■■□□□ 1.09
SSB-203ENST00000413002 CTTNBP2Q8WZ74 1663 aa21.83■■□□□ 1.09
SSB-203ENST00000413002 RANGAP1P46060 587 aaPredicted RBP21.81■■□□□ 1.08
SSB-203ENST00000413002 NPM1P06748 294 aaKnown RBP eCLIP21.79■■□□□ 1.08
SSB-203ENST00000413002 ADCY10Q96PN6 1610 aa21.79■■□□□ 1.08
SSB-203ENST00000413002 KIAA0556O60303 1618 aa21.78■■□□□ 1.08
SSB-203ENST00000413002 P3H3Q8IVL6 736 aa21.78■■□□□ 1.08
SSB-203ENST00000413002 GOLGA3Q08378 1498 aa21.71■■□□□ 1.07
SSB-203ENST00000413002 KIF21BO75037 1637 aa21.71■■□□□ 1.07
SSB-203ENST00000413002 UACAQ9BZF9 1416 aa21.71■■□□□ 1.07
SSB-203ENST00000413002 UBTFP17480 764 aaKnown RBP21.7■■□□□ 1.06
SSB-203ENST00000413002 ABCC2Q92887 1545 aa21.65■■□□□ 1.06
SSB-203ENST00000413002 PLB1Q6P1J6 1458 aa21.65■■□□□ 1.06
SSB-203ENST00000413002 UHRF1BP1LA0JNW5 1464 aa21.64■■□□□ 1.05
SSB-203ENST00000413002 FAM69CQ0P6D2 419 aa21.63■■□□□ 1.05
SSB-203ENST00000413002 MAPKBP1O60336 1514 aa21.61■■□□□ 1.05
SSB-203ENST00000413002 ARID3CA6NKF2 412 aa21.6■■□□□ 1.05
SSB-203ENST00000413002 SAMD9Q5K651 1589 aa21.58■■□□□ 1.05
SSB-203ENST00000413002 ABCC10Q5T3U5 1492 aa21.58■■□□□ 1.04
SSB-203ENST00000413002 FHOD3Q2V2M9 1422 aa21.57■■□□□ 1.04
SSB-203ENST00000413002 ASXL2Q76L83 1435 aa21.56■■□□□ 1.04
SSB-203ENST00000413002 KDM5BQ9UGL1 1544 aa21.55■■□□□ 1.04
SSB-203ENST00000413002 ABCA8O94911 1581 aa21.55■■□□□ 1.04
SSB-203ENST00000413002 KIF13AQ9H1H9 1805 aa21.55■■□□□ 1.04
SSB-203ENST00000413002 DIP2BQ9P265 1576 aa21.53■■□□□ 1.04
SSB-203ENST00000413002 ZCCHC11Q5TAX3 1644 aaKnown RBP21.51■■□□□ 1.03
SSB-203ENST00000413002 EFCAB5A4FU69 1503 aa21.45■■□□□ 1.02
SSB-203ENST00000413002 KCNH8Q96L42 1107 aa21.44■■□□□ 1.02
SSB-203ENST00000413002 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.43■■□□□ 1.02
SSB-203ENST00000413002 HNRNPUL2Q1KMD3 747 aaKnown RBP21.43■■□□□ 1.02
SSB-203ENST00000413002 ATP10BO94823 1461 aa21.43■■□□□ 1.02
SSB-203ENST00000413002 ARHGAP35Q9NRY4 1499 aa21.43■■□□□ 1.02
SSB-203ENST00000413002 RAPGEF6Q8TEU7 1601 aa21.41■■□□□ 1.02
SSB-203ENST00000413002 EPRSP07814 1512 aaKnown RBP21.41■■□□□ 1.02
SSB-203ENST00000413002 WDR7Q9Y4E6 1490 aa21.4■■□□□ 1.02
SSB-203ENST00000413002 NUP153P49790 1475 aaKnown RBP21.39■■□□□ 1.01
SSB-203ENST00000413002 ATP1B4Q9UN42 357 aaPredicted RBP21.38■■□□□ 1.01
SSB-203ENST00000413002 TSPOAP1O95153 1857 aa21.38■■□□□ 1.01
SSB-203ENST00000413002 GLI2P10070 1586 aa21.35■■□□□ 1.01
SSB-203ENST00000413002 FOXD1Q16676 465 aa21.33■■□□□ 1.01
SSB-203ENST00000413002 LOC105371045A0A1W2PR82 267 aa21.32■■□□□ 1
SSB-203ENST00000413002 FMN1Q68DA7 1419 aa21.29■■□□□ 1
SSB-203ENST00000413002 CLIP1P30622 1438 aa21.29■■□□□ 1
SSB-203ENST00000413002 MAP3K4Q9Y6R4 1608 aa21.26■□□□□ 0.99
SSB-203ENST00000413002 CDK13Q14004 1512 aaKnown RBP21.26■□□□□ 0.99
SSB-203ENST00000413002 PPRC1Q5VV67 1664 aaKnown RBP21.26■□□□□ 0.99
SSB-203ENST00000413002 PLEKHD1A6NEE1 506 aa21.25■□□□□ 0.99
SSB-203ENST00000413002 CD109Q6YHK3 1445 aa21.25■□□□□ 0.99
SSB-203ENST00000413002 KDM6BO15054 1643 aa21.21■□□□□ 0.99
SSB-203ENST00000413002 HECW1Q76N89 1606 aa21.18■□□□□ 0.98
SSB-203ENST00000413002 TEX14Q8IWB6 1497 aa21.18■□□□□ 0.98
SSB-203ENST00000413002 COL17A1Q9UMD9 1497 aaPredicted RBP21.18■□□□□ 0.98
SSB-203ENST00000413002 CEP162Q5TB80 1403 aa21.17■□□□□ 0.98
SSB-203ENST00000413002 CFAP43Q8NDM7 1665 aa21.16■□□□□ 0.98
SSB-203ENST00000413002 MAGI3Q5TCQ9 1506 aa21.15■□□□□ 0.98
SSB-203ENST00000413002 PCF11O94913 1555 aaKnown RBP21.14■□□□□ 0.98
SSB-203ENST00000413002 CASKIN1Q8WXD9 1431 aa21.14■□□□□ 0.98
SSB-203ENST00000413002 ABCA9Q8IUA7 1624 aa21.12■□□□□ 0.97
SSB-203ENST00000413002 CDK11AQ9UQ88 783 aaPredicted RBP21.1■□□□□ 0.97
SSB-203ENST00000413002 LRRIQ1Q96JM4 1722 aa21.09■□□□□ 0.97
SSB-203ENST00000413002 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.08■□□□□ 0.962e-20■□□□□ 9
SSB-203ENST00000413002 FYCO1Q9BQS8 1478 aa21.06■□□□□ 0.96
SSB-203ENST00000413002 TTC37Q6PGP7 1564 aa21.06■□□□□ 0.96
SSB-203ENST00000413002 TROQ12816 1431 aaPredicted RBP21.04■□□□□ 0.96
SSB-203ENST00000413002 CCDC18Q5T9S5 1454 aa21.02■□□□□ 0.96
SSB-203ENST00000413002 KIF14Q15058 1648 aa21.01■□□□□ 0.95
SSB-203ENST00000413002 RAPGEF3O95398 923 aa21.01■□□□□ 0.95
SSB-203ENST00000413002 FANCAO15360 1455 aa20.97■□□□□ 0.95
SSB-203ENST00000413002 NEO1Q92859 1461 aa20.97■□□□□ 0.95
SSB-203ENST00000413002 ARAP3Q8WWN8 1544 aa20.97■□□□□ 0.95
SSB-203ENST00000413002 PLCH2O75038 1416 aa20.95■□□□□ 0.95
SSB-203ENST00000413002 PHLDB1Q86UU1 1377 aa20.95■□□□□ 0.94
SSB-203ENST00000413002 AKNAQ7Z591 1439 aa20.95■□□□□ 0.94
SSB-203ENST00000413002 EFCAB2Q5VUJ9 269 aa20.91■□□□□ 0.94
SSB-203ENST00000413002 VPS8Q8N3P4 1428 aa20.88■□□□□ 0.93
SSB-203ENST00000413002 MTUS2Q5JR59 1369 aa20.88■□□□□ 0.93
SSB-203ENST00000413002 KDM4FA0A1W2PPD8 638 aa20.88■□□□□ 0.93
SSB-203ENST00000413002 DENND4BO75064 1496 aaPredicted RBP20.88■□□□□ 0.93
SSB-203ENST00000413002 ARHGAP5Q13017 1502 aa20.87■□□□□ 0.93
SSB-203ENST00000413002 SCAPERQ9BY12 1400 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms