RNA–Protein interactions for RNA: ENST00000412050.8

CPEB3-202, Transcript of cytoplasmic polyadenylation element binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CPEB3, Length 7,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3-202ENST00000412050 PLCB2Q00722 1185 aa14.28□□□□□ -0.12
CPEB3-202ENST00000412050 ERICH6BQ5W0A0 696 aa14.28□□□□□ -0.12
CPEB3-202ENST00000412050 AK7Q96M32 723 aa14.28□□□□□ -0.12
CPEB3-202ENST00000412050 HAP1P54257 671 aaPredicted RBP14.28□□□□□ -0.12
CPEB3-202ENST00000412050 PNNQ9H307 717 aaKnown RBP14.26□□□□□ -0.13
CPEB3-202ENST00000412050 PATL2C9JE40 543 aaKnown RBP14.26□□□□□ -0.13
CPEB3-202ENST00000412050 RRP12Q5JTH9 1297 aaKnown RBP14.24□□□□□ -0.13
CPEB3-202ENST00000412050 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.24□□□□□ -0.13
CPEB3-202ENST00000412050 GOLGA2Q08379 1002 aa14.24□□□□□ -0.13
CPEB3-202ENST00000412050 C14orf37Q86TY3 774 aa14.23□□□□□ -0.13
CPEB3-202ENST00000412050 FAM9BQ8IZU0 186 aa14.21□□□□□ -0.13
CPEB3-202ENST00000412050 VSIG10Q8N0Z9 540 aa14.21□□□□□ -0.14
CPEB3-202ENST00000412050 MYH16Q9H6N6 1097 aa14.2□□□□□ -0.14
CPEB3-202ENST00000412050 KIAA2012Q0VF49 1180 aa14.2□□□□□ -0.14
CPEB3-202ENST00000412050 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.18□□□□□ -0.14
CPEB3-202ENST00000412050 NAP1L2Q9ULW6 460 aaPredicted RBP14.18□□□□□ -0.14
CPEB3-202ENST00000412050 TAF7LQ5H9L4 462 aa14.18□□□□□ -0.14
CPEB3-202ENST00000412050 ZNF777Q9ULD5 760 aaPredicted RBP14.18□□□□□ -0.14
CPEB3-202ENST00000412050 TNNT3P45378 269 aaPredicted RBP14.17□□□□□ -0.14
CPEB3-202ENST00000412050 CCDC136Q96JN2 1154 aa14.14□□□□□ -0.15
CPEB3-202ENST00000412050 NAP1L5Q96NT1 182 aaPredicted RBP14.14□□□□□ -0.15
CPEB3-202ENST00000412050 GOLGA6L6A8MZA4 724 aa14.13□□□□□ -0.15
CPEB3-202ENST00000412050 RTN4Q9NQC3 1192 aaKnown RBP14.13□□□□□ -0.15
CPEB3-202ENST00000412050 ANP32EQ9BTT0 268 aa14.12□□□□□ -0.15
CPEB3-202ENST00000412050 HNRNPUQ00839 825 aaKnown RBP eCLIP14.11□□□□□ -0.15
CPEB3-202ENST00000412050 MEX3CQ5U5Q3 659 aaKnown RBP14.1□□□□□ -0.15
CPEB3-202ENST00000412050 GOLGA6L22H0YM25 854 aa14.09□□□□□ -0.15
CPEB3-202ENST00000412050 L1TD1Q5T7N2 865 aaKnown RBP14.09□□□□□ -0.15
CPEB3-202ENST00000412050 IRX6P78412 446 aaPredicted RBP14.08□□□□□ -0.16
CPEB3-202ENST00000412050 WDR43Q15061 677 aaKnown RBP eCLIP14.06□□□□□ -0.16
CPEB3-202ENST00000412050 TMC1Q8TDI8 760 aa14.06□□□□□ -0.16
CPEB3-202ENST00000412050 P3H3Q8IVL6 736 aa14.05□□□□□ -0.16
CPEB3-202ENST00000412050 WDR70Q9NW82 654 aa14.05□□□□□ -0.16
CPEB3-202ENST00000412050 ACIN1Q9UKV3 1341 aaKnown RBP14.04□□□□□ -0.16
CPEB3-202ENST00000412050 CHAF1AQ13111 956 aaPredicted RBP14.04□□□□□ -0.16
CPEB3-202ENST00000412050 ARID3AQ99856 593 aa14.04□□□□□ -0.16
CPEB3-202ENST00000412050 ARID4BQ4LE39 1312 aaPredicted RBP14.04□□□□□ -0.16
CPEB3-202ENST00000412050 BECN1Q14457 450 aa14.02□□□□□ -0.16
CPEB3-202ENST00000412050 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.02□□□□□ -0.17
CPEB3-202ENST00000412050 FGD1P98174 961 aa14.01□□□□□ -0.17
CPEB3-202ENST00000412050 NRDCO43847 1150 aa14□□□□□ -0.17
CPEB3-202ENST00000412050 CEP89Q96ST8 783 aa13.99□□□□□ -0.17
CPEB3-202ENST00000412050 PPP4R2Q9NY27 417 aa13.98□□□□□ -0.17
CPEB3-202ENST00000412050 CASC1Q6TDU7 716 aa13.98□□□□□ -0.17
CPEB3-202ENST00000412050 DRC7Q8IY82 874 aa13.98□□□□□ -0.17
CPEB3-202ENST00000412050 SENP3-EIF4A1A0A087X0R7 540 aa13.96□□□□□ -0.18
CPEB3-202ENST00000412050 GOLGA6L4A6NEF3 574 aa13.95□□□□□ -0.18
CPEB3-202ENST00000412050 KDM2AQ9Y2K7 1162 aa13.95□□□□□ -0.18
CPEB3-202ENST00000412050 PTMSP20962 102 aa13.94□□□□□ -0.18
CPEB3-202ENST00000412050 LAS1LQ9Y4W2 734 aaKnown RBP13.94□□□□□ -0.18
CPEB3-202ENST00000412050 PPM1GO15355 546 aaPredicted RBP13.93□□□□□ -0.18
CPEB3-202ENST00000412050 BCCIPQ9P287 314 aaKnown RBP eCLIP13.93□□□□□ -0.18
CPEB3-202ENST00000412050 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.92□□□□□ -0.182e-6■■■■■ 149.1
CPEB3-202ENST00000412050 PPM1FP49593 454 aaPredicted RBP13.92□□□□□ -0.18
CPEB3-202ENST00000412050 GOLGA6L1Q8N7Z2 621 aa13.91□□□□□ -0.18
CPEB3-202ENST00000412050 DDX10Q13206 875 aaKnown RBP13.91□□□□□ -0.18
CPEB3-202ENST00000412050 SEPT11Q9NVA2 429 aaKnown RBP13.91□□□□□ -0.18
CPEB3-202ENST00000412050 SETQ01105 290 aaPredicted RBP13.9□□□□□ -0.18
CPEB3-202ENST00000412050 KCNJ4P48050 445 aa13.9□□□□□ -0.18
CPEB3-202ENST00000412050 LMOD2Q6P5Q4 547 aa13.89□□□□□ -0.19
CPEB3-202ENST00000412050 DDRGK1Q96HY6 314 aa13.88□□□□□ -0.19
CPEB3-202ENST00000412050 CREBRFQ8IUR6 639 aa13.88□□□□□ -0.19
CPEB3-202ENST00000412050 STK11IPQ8N1F8 1099 aa13.87□□□□□ -0.19
CPEB3-202ENST00000412050 GNL2Q13823 731 aaKnown RBP13.87□□□□□ -0.19
CPEB3-202ENST00000412050 VPS53Q5VIR6 699 aa13.87□□□□□ -0.19
CPEB3-202ENST00000412050 OS9Q13438 667 aaPredicted RBP13.86□□□□□ -0.19
CPEB3-202ENST00000412050 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.86□□□□□ -0.19
CPEB3-202ENST00000412050 FTSJ3Q8IY81 847 aaKnown RBP13.85□□□□□ -0.19
CPEB3-202ENST00000412050 HSP90AB1P08238 724 aaKnown RBP13.85□□□□□ -0.19
CPEB3-202ENST00000412050 PAF1Q8N7H5 531 aa13.84□□□□□ -0.19
CPEB3-202ENST00000412050 NEUROD2Q15784 382 aa13.83□□□□□ -0.19
CPEB3-202ENST00000412050 BBXQ8WY36 941 aaPredicted RBP13.83□□□□□ -0.2
CPEB3-202ENST00000412050 CCDC97Q96F63 343 aaPredicted RBP13.83□□□□□ -0.2
CPEB3-202ENST00000412050 TONSLQ96HA7 1378 aa13.82□□□□□ -0.2
CPEB3-202ENST00000412050 TMX4Q9H1E5 349 aaPredicted RBP13.81□□□□□ -0.2
CPEB3-202ENST00000412050 MSNP26038 577 aaKnown RBP13.8□□□□□ -0.2
CPEB3-202ENST00000412050 SPRYD3Q8NCJ5 442 aa13.79□□□□□ -0.2
CPEB3-202ENST00000412050 G3V3G9 751 aa13.78□□□□□ -0.2
CPEB3-202ENST00000412050 DCAF8Q5TAQ9 597 aa13.78□□□□□ -0.2
CPEB3-202ENST00000412050 NPM1P06748 294 aaKnown RBP eCLIP13.78□□□□□ -0.2
CPEB3-202ENST00000412050 HIRIP3Q9BW71 556 aaPredicted RBP13.77□□□□□ -0.21
CPEB3-202ENST00000412050 PPP1R15AO75807 674 aaPredicted RBP13.75□□□□□ -0.21
CPEB3-202ENST00000412050 MRS2Q9HD23 443 aa13.74□□□□□ -0.21
CPEB3-202ENST00000412050 CWC22Q9HCG8 908 aaKnown RBP13.73□□□□□ -0.21
CPEB3-202ENST00000412050 PLCD4Q9BRC7 762 aa13.71□□□□□ -0.22
CPEB3-202ENST00000412050 DCAF8L1A6NGE4 600 aa13.7□□□□□ -0.22
CPEB3-202ENST00000412050 RBM19Q9Y4C8 960 aaKnown RBP13.7□□□□□ -0.22
CPEB3-202ENST00000412050 CHIC2Q9UKJ5 165 aa13.69□□□□□ -0.22
CPEB3-202ENST00000412050 HTATSF1O43719 755 aaKnown RBP13.68□□□□□ -0.22
CPEB3-202ENST00000412050 RASSF8Q8NHQ8 419 aa13.68□□□□□ -0.22
CPEB3-202ENST00000412050 CBX1P83916 185 aa13.67□□□□□ -0.22
CPEB3-202ENST00000412050 RGS3P49796 1198 aa13.67□□□□□ -0.22
CPEB3-202ENST00000412050 TCEAL9Q9UHQ7 104 aa13.66□□□□□ -0.22
CPEB3-202ENST00000412050 TPM4P67936 248 aa13.66□□□□□ -0.22
CPEB3-202ENST00000412050 PES1O00541 588 aaKnown RBP13.66□□□□□ -0.22
CPEB3-202ENST00000412050 GSE1Q14687 1217 aa13.65□□□□□ -0.22
CPEB3-202ENST00000412050 MARCH6O60337 910 aa13.65□□□□□ -0.22
CPEB3-202ENST00000412050 FRAT1Q92837 279 aaPredicted RBP13.64□□□□□ -0.23
CPEB3-202ENST00000412050 PHF23Q9BUL5 403 aaPredicted RBP13.64□□□□□ -0.23
CPEB3-202ENST00000412050 SOX12O15370 315 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms