RNA–Protein interactions for RNA: ENST00000411638.6

NELFA-203, Transcript of negative elongation factor complex member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NELFA, Length 2,199 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-203ENST00000411638 AQRO60306 1485 aaKnown RBP eCLIP24.44■■□□□ 1.52e-7■■■□□ 18
NELFA-203ENST00000411638 THOC2Q8NI27 1593 aaKnown RBP24.44■■□□□ 1.5
NELFA-203ENST00000411638 FHAD1B1AJZ9 1412 aa24.44■■□□□ 1.5
NELFA-203ENST00000411638 ERCC6Q03468 1493 aa24.43■■□□□ 1.5
NELFA-203ENST00000411638 KANK4Q5T7N3 995 aaPredicted RBP24.43■■□□□ 1.5
NELFA-203ENST00000411638 GRIN2BQ13224 1484 aa24.41■■□□□ 1.5
NELFA-203ENST00000411638 ADAMTS12P58397 1594 aa24.4■■□□□ 1.5
NELFA-203ENST00000411638 TIAM1Q13009 1591 aa24.37■■□□□ 1.49
NELFA-203ENST00000411638 ZNF608Q9ULD9 1512 aaPredicted RBP24.37■■□□□ 1.49
NELFA-203ENST00000411638 SAMD9Q5K651 1589 aa24.36■■□□□ 1.49
NELFA-203ENST00000411638 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.35■■□□□ 1.49
NELFA-203ENST00000411638 FHOD3Q2V2M9 1422 aa24.35■■□□□ 1.49
NELFA-203ENST00000411638 PCF11O94913 1555 aaKnown RBP24.33■■□□□ 1.49
NELFA-203ENST00000411638 P3H3Q8IVL6 736 aa24.32■■□□□ 1.48
NELFA-203ENST00000411638 CFAP43Q8NDM7 1665 aa24.3■■□□□ 1.48
NELFA-203ENST00000411638 RRBP1Q9P2E9 1410 aaKnown RBP24.29■■□□□ 1.48
NELFA-203ENST00000411638 FYCO1Q9BQS8 1478 aa24.29■■□□□ 1.48
NELFA-203ENST00000411638 CASKIN1Q8WXD9 1431 aa24.29■■□□□ 1.48
NELFA-203ENST00000411638 CCER1Q8TC90 406 aaPredicted RBP24.29■■□□□ 1.48
NELFA-203ENST00000411638 EIF4G3O43432 1585 aaKnown RBP24.28■■□□□ 1.48
NELFA-203ENST00000411638 FMN1Q68DA7 1419 aa24.27■■□□□ 1.48
NELFA-203ENST00000411638 LRRC9Q6ZRR7 1453 aa24.26■■□□□ 1.47
NELFA-203ENST00000411638 HNRNPUL2Q1KMD3 747 aaKnown RBP24.23■■□□□ 1.47
NELFA-203ENST00000411638 IQGAP2Q13576 1575 aa24.22■■□□□ 1.47
NELFA-203ENST00000411638 SNAPC4Q5SXM2 1469 aa24.22■■□□□ 1.47
NELFA-203ENST00000411638 MAGI1Q96QZ7 1491 aaPredicted RBP24.16■■□□□ 1.46
NELFA-203ENST00000411638 CCNB3Q8WWL7 1395 aa24.15■■□□□ 1.46
NELFA-203ENST00000411638 UGGT2Q9NYU1 1516 aa24.13■■□□□ 1.45
NELFA-203ENST00000411638 GRIN2AQ12879 1464 aa24.13■■□□□ 1.45
NELFA-203ENST00000411638 KIAA0586Q9BVV6 1533 aa24.12■■□□□ 1.45
NELFA-203ENST00000411638 LRRIQ1Q96JM4 1722 aa24.1■■□□□ 1.45
NELFA-203ENST00000411638 ATP1B4Q9UN42 357 aaPredicted RBP24.08■■□□□ 1.44
NELFA-203ENST00000411638 SYNJ2O15056 1496 aa24.07■■□□□ 1.44
NELFA-203ENST00000411638 PHLDB1Q86UU1 1377 aa24.06■■□□□ 1.44
NELFA-203ENST00000411638 DISP1Q96F81 1524 aa23.99■■□□□ 1.43
NELFA-203ENST00000411638 KIAA0556O60303 1618 aa23.98■■□□□ 1.43
NELFA-203ENST00000411638 CEP170Q5SW79 1584 aa23.98■■□□□ 1.43
NELFA-203ENST00000411638 HECW1Q76N89 1606 aa23.97■■□□□ 1.43
NELFA-203ENST00000411638 CHMP7Q8WUX9 453 aaPredicted RBP23.97■■□□□ 1.43
NELFA-203ENST00000411638 CCDC18Q5T9S5 1454 aa23.97■■□□□ 1.43
NELFA-203ENST00000411638 NUP160Q12769 1436 aa23.95■■□□□ 1.42
NELFA-203ENST00000411638 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.94■■□□□ 1.424e-7■■■■■ 33.5
NELFA-203ENST00000411638 MTUS2Q5JR59 1369 aa23.93■■□□□ 1.42
NELFA-203ENST00000411638 EHBP1L1Q8N3D4 1523 aa23.92■■□□□ 1.42
NELFA-203ENST00000411638 EPRSP07814 1512 aaKnown RBP23.89■■□□□ 1.41
NELFA-203ENST00000411638 SUPT6HQ7KZ85 1726 aaKnown RBP23.89■■□□□ 1.41
NELFA-203ENST00000411638 CLSPNQ9HAW4 1339 aa23.87■■□□□ 1.41
NELFA-203ENST00000411638 DHX57Q6P158 1386 aaKnown RBP23.87■■□□□ 1.41
NELFA-203ENST00000411638 MAGI3Q5TCQ9 1506 aa23.87■■□□□ 1.41
NELFA-203ENST00000411638 ARHGEF11O15085 1522 aa23.86■■□□□ 1.41
NELFA-203ENST00000411638 NCOA2Q15596 1464 aa23.86■■□□□ 1.41
NELFA-203ENST00000411638 FGD6Q6ZV73 1430 aa23.85■■□□□ 1.41
NELFA-203ENST00000411638 FBLN2P98095 1184 aa23.82■■□□□ 1.4
NELFA-203ENST00000411638 ITGAEP38570 1179 aa23.82■■□□□ 1.4
NELFA-203ENST00000411638 FAM50AQ14320 339 aaKnown RBP23.81■■□□□ 1.4
NELFA-203ENST00000411638 RAPGEF6Q8TEU7 1601 aa23.8■■□□□ 1.4
NELFA-203ENST00000411638 MYOM3Q5VTT5 1437 aa23.8■■□□□ 1.4
NELFA-203ENST00000411638 CDK13Q14004 1512 aaKnown RBP23.78■■□□□ 1.4
NELFA-203ENST00000411638 JPH4Q96JJ6 628 aa23.78■■□□□ 1.4
NELFA-203ENST00000411638 SETD5Q9C0A6 1442 aa23.77■■□□□ 1.4
NELFA-203ENST00000411638 NUP153P49790 1475 aaKnown RBP23.76■■□□□ 1.39
NELFA-203ENST00000411638 CARMIL2Q6F5E8 1435 aa23.76■■□□□ 1.39
NELFA-203ENST00000411638 RAB3GAP2Q9H2M9 1393 aa23.76■■□□□ 1.39
NELFA-203ENST00000411638 PTPN23Q9H3S7 1636 aa23.7■■□□□ 1.38
NELFA-203ENST00000411638 CHD1O14646 1710 aa23.7■■□□□ 1.38
NELFA-203ENST00000411638 TCOF1Q13428 1488 aaKnown RBP23.68■■□□□ 1.38
NELFA-203ENST00000411638 MIA2Q96PC5 1412 aa23.65■■□□□ 1.38
NELFA-203ENST00000411638 PLB1Q6P1J6 1458 aa23.65■■□□□ 1.38
NELFA-203ENST00000411638 PTPRKQ15262 1439 aa23.63■■□□□ 1.37
NELFA-203ENST00000411638 ABCA8O94911 1581 aa23.62■■□□□ 1.37
NELFA-203ENST00000411638 CDK11AQ9UQ88 783 aaPredicted RBP23.61■■□□□ 1.37
NELFA-203ENST00000411638 ARID3CA6NKF2 412 aa23.59■■□□□ 1.37
NELFA-203ENST00000411638 MAPKBP1O60336 1514 aa23.59■■□□□ 1.37
NELFA-203ENST00000411638 HFM1A2PYH4 1435 aa23.58■■□□□ 1.37
NELFA-203ENST00000411638 SHROOM2Q13796 1616 aa23.58■■□□□ 1.36
NELFA-203ENST00000411638 PRG4Q92954 1404 aaPredicted RBP23.57■■□□□ 1.36
NELFA-203ENST00000411638 TROQ12816 1431 aaPredicted RBP23.56■■□□□ 1.36
NELFA-203ENST00000411638 DIEXFQ68CQ4 756 aaKnown RBP23.55■■□□□ 1.36
NELFA-203ENST00000411638 ADCY10Q96PN6 1610 aa23.54■■□□□ 1.36
NELFA-203ENST00000411638 ZNF316A6NFI3 1004 aaPredicted RBP23.53■■□□□ 1.36
NELFA-203ENST00000411638 NAIPQ13075 1403 aa23.51■■□□□ 1.35
NELFA-203ENST00000411638 AKNAQ7Z591 1439 aa23.48■■□□□ 1.35
NELFA-203ENST00000411638 PTPRGP23470 1445 aa23.48■■□□□ 1.35
NELFA-203ENST00000411638 ATP10BO94823 1461 aa23.48■■□□□ 1.35
NELFA-203ENST00000411638 GCC2Q8IWJ2 1684 aa23.46■■□□□ 1.35
NELFA-203ENST00000411638 ITSN2Q9NZM3 1697 aa23.45■■□□□ 1.34
NELFA-203ENST00000411638 KIF14Q15058 1648 aa23.44■■□□□ 1.34
NELFA-203ENST00000411638 UACAQ9BZF9 1416 aa23.43■■□□□ 1.34
NELFA-203ENST00000411638 CLASP1Q7Z460 1538 aa23.42■■□□□ 1.34
NELFA-203ENST00000411638 DNMT1P26358 1616 aaKnown RBP23.42■■□□□ 1.34
NELFA-203ENST00000411638 GPATCH8Q9UKJ3 1502 aaKnown RBP23.41■■□□□ 1.34
NELFA-203ENST00000411638 PLEKHD1A6NEE1 506 aa23.39■■□□□ 1.33
NELFA-203ENST00000411638 DAPK1P53355 1430 aa23.39■■□□□ 1.33
NELFA-203ENST00000411638 ABCC5O15440 1437 aa23.37■■□□□ 1.33
NELFA-203ENST00000411638 ABCC10Q5T3U5 1492 aa23.36■■□□□ 1.33
NELFA-203ENST00000411638 ROCK1Q13464 1354 aa23.36■■□□□ 1.33
NELFA-203ENST00000411638 ERCC6L2Q5T890 1561 aa23.36■■□□□ 1.33
NELFA-203ENST00000411638 TIMELESSQ9UNS1 1208 aa23.34■■□□□ 1.33
NELFA-203ENST00000411638 RRP7BPQ9NSQ0 103 aa23.34■■□□□ 1.33
NELFA-203ENST00000411638 CHIC2Q9UKJ5 165 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms