RNA–Protein interactions for RNA: ENST00000410913.1

RN7SKP42-201, Transcript of RNA, 7SK small nuclear pseudogene 42, humanhuman

BASIC

Gene RN7SKP42, Length 300 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP42-201ENST00000410913 PROM2Q8N271 834 aa14.81□□□□□ -0.04
RN7SKP42-201ENST00000410913 ATAD2BQ9ULI0 1458 aa14.81□□□□□ -0.04
RN7SKP42-201ENST00000410913 SMARCA2P51531 1590 aa14.8□□□□□ -0.04
RN7SKP42-201ENST00000410913 PEG3Q9GZU2 1588 aa14.78□□□□□ -0.04
RN7SKP42-201ENST00000410913 CREBZFQ9NS37 354 aa14.78□□□□□ -0.04
RN7SKP42-201ENST00000410913 BAZ1BQ9UIG0 1483 aaKnown RBP14.73□□□□□ -0.05
RN7SKP42-201ENST00000410913 TOP2AP11388 1531 aaKnown RBP14.71□□□□□ -0.05
RN7SKP42-201ENST00000410913 NCAPD3P42695 1498 aa14.69□□□□□ -0.06
RN7SKP42-201ENST00000410913 CD44P16070 742 aaKnown RBP14.69□□□□□ -0.06
RN7SKP42-201ENST00000410913 HMGXB3Q12766 1538 aa14.66□□□□□ -0.06
RN7SKP42-201ENST00000410913 GABBR2O75899 941 aa14.61□□□□□ -0.07
RN7SKP42-201ENST00000410913 CCDC88BA6NC98 1476 aa14.57□□□□□ -0.08
RN7SKP42-201ENST00000410913 NPM1P06748 294 aaKnown RBP eCLIP14.57□□□□□ -0.08
RN7SKP42-201ENST00000410913 FKBP8Q14318 412 aa14.57□□□□□ -0.08
RN7SKP42-201ENST00000410913 MNX1P50219 401 aaPredicted RBP14.55□□□□□ -0.08
RN7SKP42-201ENST00000410913 CLCN6P51797 869 aa14.53□□□□□ -0.08
RN7SKP42-201ENST00000410913 ZRANB1Q9UGI0 708 aa14.51□□□□□ -0.09
RN7SKP42-201ENST00000410913 PAK3O75914 559 aaPredicted RBP14.49□□□□□ -0.09
RN7SKP42-201ENST00000410913 ZNF579Q8NAF0 562 aaKnown RBP14.49□□□□□ -0.09
RN7SKP42-201ENST00000410913 PLEKHG5O94827 1062 aa14.46□□□□□ -0.09
RN7SKP42-201ENST00000410913 MIER1Q8N108 512 aa14.43□□□□□ -0.1
RN7SKP42-201ENST00000410913 PLCD3Q8N3E9 789 aa14.35□□□□□ -0.11
RN7SKP42-201ENST00000410913 CADPSQ9ULU8 1353 aa14.33□□□□□ -0.12
RN7SKP42-201ENST00000410913 PRDM2Q13029 1718 aa14.32□□□□□ -0.12
RN7SKP42-201ENST00000410913 NESP48681 1621 aa14.31□□□□□ -0.12
RN7SKP42-201ENST00000410913 CFTRP13569 1480 aa14.31□□□□□ -0.12
RN7SKP42-201ENST00000410913 PHF12Q96QT6 1004 aa14.3□□□□□ -0.12
RN7SKP42-201ENST00000410913 DCBLD2Q96PD2 775 aa14.28□□□□□ -0.12
RN7SKP42-201ENST00000410913 ZBTB47Q9UFB7 747 aaPredicted RBP14.28□□□□□ -0.12
RN7SKP42-201ENST00000410913 FBXO3Q9UK99 471 aa14.28□□□□□ -0.12
RN7SKP42-201ENST00000410913 LAMC3Q9Y6N6 1575 aa14.27□□□□□ -0.12
RN7SKP42-201ENST00000410913 GALR2O43603 387 aaPredicted RBP14.26□□□□□ -0.13
RN7SKP42-201ENST00000410913 POTEIP0CG38 1075 aa14.26□□□□□ -0.13
RN7SKP42-201ENST00000410913 TSPYL2Q9H2G4 693 aaPredicted RBP14.26□□□□□ -0.13
RN7SKP42-201ENST00000410913 ABCC8Q09428 1581 aa14.22□□□□□ -0.13
RN7SKP42-201ENST00000410913 CCDC61Q9Y6R9 512 aa14.19□□□□□ -0.14
RN7SKP42-201ENST00000410913 FANCD2Q9BXW9 1451 aa14.18□□□□□ -0.14
RN7SKP42-201ENST00000410913 RASEFQ8IZ41 740 aa14.18□□□□□ -0.14
RN7SKP42-201ENST00000410913 KIF21AQ7Z4S6 1674 aa14.17□□□□□ -0.14
RN7SKP42-201ENST00000410913 PDS5BQ9NTI5 1447 aa14.16□□□□□ -0.14
RN7SKP42-201ENST00000410913 TRIM41Q8WV44 630 aa14.16□□□□□ -0.14
RN7SKP42-201ENST00000410913 MS4A3Q96HJ5 214 aa14.13□□□□□ -0.15
RN7SKP42-201ENST00000410913 CEP164Q9UPV0 1460 aa14.12□□□□□ -0.15
RN7SKP42-201ENST00000410913 LHX8Q68G74 356 aa14.12□□□□□ -0.15
RN7SKP42-201ENST00000410913 WRNQ14191 1432 aaPredicted RBP eCLIP14.12□□□□□ -0.15
RN7SKP42-201ENST00000410913 NUBP1P53384 320 aa14.11□□□□□ -0.15
RN7SKP42-201ENST00000410913 KIF12Q96FN5 646 aa14.09□□□□□ -0.15
RN7SKP42-201ENST00000410913 ERCC6Q03468 1493 aa14.09□□□□□ -0.15
RN7SKP42-201ENST00000410913 SYNJ1O43426 1573 aa14.09□□□□□ -0.15
RN7SKP42-201ENST00000410913 VASPP50552 380 aaPredicted RBP14.07□□□□□ -0.16
RN7SKP42-201ENST00000410913 CUX1P39880 1505 aa14.06□□□□□ -0.16
RN7SKP42-201ENST00000410913 FAM212AQ96EL1 285 aa14.05□□□□□ -0.16
RN7SKP42-201ENST00000410913 BIVM-ERCC5R4GMW8 1640 aa14.04□□□□□ -0.16
RN7SKP42-201ENST00000410913 TOP2BQ02880 1626 aa14.04□□□□□ -0.16
RN7SKP42-201ENST00000410913 DNMBPQ6XZF7 1577 aa14.02□□□□□ -0.16
RN7SKP42-201ENST00000410913 URB2Q14146 1524 aaKnown RBP14.01□□□□□ -0.17
RN7SKP42-201ENST00000410913 MAP3K13O43283 966 aa14.01□□□□□ -0.17
RN7SKP42-201ENST00000410913 ASTLQ6HA08 431 aaPredicted RBP14.01□□□□□ -0.17
RN7SKP42-201ENST00000410913 TOPBP1Q92547 1522 aa14□□□□□ -0.17
RN7SKP42-201ENST00000410913 MRC2Q9UBG0 1479 aa14□□□□□ -0.17
RN7SKP42-201ENST00000410913 ATMINO43313 823 aaPredicted RBP13.97□□□□□ -0.17
RN7SKP42-201ENST00000410913 KLHL34Q8N239 644 aa13.97□□□□□ -0.17
RN7SKP42-201ENST00000410913 SGIP1Q9BQI5 828 aa13.96□□□□□ -0.17
RN7SKP42-201ENST00000410913 FGD5Q6ZNL6 1462 aa13.95□□□□□ -0.18
RN7SKP42-201ENST00000410913 PELP1Q8IZL8 1130 aaKnown RBP13.95□□□□□ -0.18
RN7SKP42-201ENST00000410913 THOC2Q8NI27 1593 aaKnown RBP13.95□□□□□ -0.18
RN7SKP42-201ENST00000410913 FAM9AQ8IZU1 332 aaPredicted RBP13.93□□□□□ -0.18
RN7SKP42-201ENST00000410913 DCAF8Q5TAQ9 597 aa13.92□□□□□ -0.18
RN7SKP42-201ENST00000410913 PCDHB13Q9Y5F0 798 aa13.92□□□□□ -0.18
RN7SKP42-201ENST00000410913 WDR62O43379 1518 aa13.91□□□□□ -0.18
RN7SKP42-201ENST00000410913 TIE1P35590 1138 aa13.91□□□□□ -0.18
RN7SKP42-201ENST00000410913 SLC39A7Q92504 469 aa13.91□□□□□ -0.18
RN7SKP42-201ENST00000410913 BMP2KQ9NSY1 1161 aaPredicted RBP13.9□□□□□ -0.18
RN7SKP42-201ENST00000410913 POLA1P09884 1462 aaPredicted RBP13.9□□□□□ -0.18
RN7SKP42-201ENST00000410913 TRPC6Q9Y210 931 aa13.89□□□□□ -0.19
RN7SKP42-201ENST00000410913 SOGA1O94964 1423 aa13.89□□□□□ -0.19
RN7SKP42-201ENST00000410913 RAD54L2Q9Y4B4 1467 aa13.88□□□□□ -0.19
RN7SKP42-201ENST00000410913 C7P10643 843 aa13.88□□□□□ -0.19
RN7SKP42-201ENST00000410913 ATN1P54259 1190 aaPredicted RBP13.88□□□□□ -0.19
RN7SKP42-201ENST00000410913 METRNQ9UJH8 293 aa13.87□□□□□ -0.19
RN7SKP42-201ENST00000410913 RUSC2Q8N2Y8 1516 aa13.85□□□□□ -0.19
RN7SKP42-201ENST00000410913 GSE1Q14687 1217 aa13.84□□□□□ -0.19
RN7SKP42-201ENST00000410913 CUX2O14529 1486 aa13.83□□□□□ -0.2
RN7SKP42-201ENST00000410913 IFNL1Q8IU54 200 aa13.83□□□□□ -0.2
RN7SKP42-201ENST00000410913 TTLL13PA6NNM8 815 aa13.81□□□□□ -0.2
RN7SKP42-201ENST00000410913 PYGBP11216 843 aa13.81□□□□□ -0.2
RN7SKP42-201ENST00000410913 WDR97A6NE52 1622 aa13.81□□□□□ -0.2
RN7SKP42-201ENST00000410913 TARBP1Q13395 1621 aaKnown RBP13.81□□□□□ -0.2
RN7SKP42-201ENST00000410913 POTEB2H3BUK9 544 aa13.8□□□□□ -0.2
RN7SKP42-201ENST00000410913 IFNLR1Q8IU57 520 aaPredicted RBP13.8□□□□□ -0.2
RN7SKP42-201ENST00000410913 ABCA10Q8WWZ4 1543 aa13.8□□□□□ -0.2
RN7SKP42-201ENST00000410913 KIF27Q86VH2 1401 aa13.79□□□□□ -0.2
RN7SKP42-201ENST00000410913 IFT140Q96RY7 1462 aa13.79□□□□□ -0.2
RN7SKP42-201ENST00000410913 EEA1Q15075 1411 aa13.78□□□□□ -0.2
RN7SKP42-201ENST00000410913 TDRD9Q8NDG6 1382 aaKnown RBP13.77□□□□□ -0.21
RN7SKP42-201ENST00000410913 SPOCK2Q92563 424 aa13.77□□□□□ -0.21
RN7SKP42-201ENST00000410913 ZNF608Q9ULD9 1512 aaPredicted RBP13.74□□□□□ -0.21
RN7SKP42-201ENST00000410913 LOC105371045A0A1W2PR82 267 aa13.73□□□□□ -0.21
RN7SKP42-201ENST00000410913 OTUD5Q96G74 571 aa13.73□□□□□ -0.21
RN7SKP42-201ENST00000410913 TRIM35Q9UPQ4 493 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms