RNA–Protein interactions for RNA: ENST00000410041.1

DYSF-209, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,594 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-209ENST00000410041 TSHZ2Q9NRE2 1034 aa17.22■□□□□ 0.35
DYSF-209ENST00000410041 TIMELESSQ9UNS1 1208 aa17.22■□□□□ 0.35
DYSF-209ENST00000410041 NOP58Q9Y2X3 529 aaKnown RBP17.22■□□□□ 0.35
DYSF-209ENST00000410041 NEFMP07197 916 aa17.21■□□□□ 0.35
DYSF-209ENST00000410041 PPM1GO15355 546 aaPredicted RBP17.2■□□□□ 0.34
DYSF-209ENST00000410041 SIN3AQ96ST3 1273 aa17.2■□□□□ 0.34
DYSF-209ENST00000410041 HSP90AA1P07900 732 aaKnown RBP17.19■□□□□ 0.34
DYSF-209ENST00000410041 FBLN2P98095 1184 aa17.17■□□□□ 0.34
DYSF-209ENST00000410041 CCNB3Q8WWL7 1395 aa17.16■□□□□ 0.34
DYSF-209ENST00000410041 WDR43Q15061 677 aaKnown RBP eCLIP17.15■□□□□ 0.34
DYSF-209ENST00000410041 RRP7BPQ9NSQ0 103 aa17.15■□□□□ 0.34
DYSF-209ENST00000410041 SOGA1O94964 1423 aa17.15■□□□□ 0.34
DYSF-209ENST00000410041 VPS8Q8N3P4 1428 aa17.13■□□□□ 0.33
DYSF-209ENST00000410041 ERICH6BQ5W0A0 696 aa17.11■□□□□ 0.33
DYSF-209ENST00000410041 B4GALNT3Q6L9W6 998 aa17.1■□□□□ 0.33
DYSF-209ENST00000410041 DEKP35659 375 aaKnown RBP17.09■□□□□ 0.33
DYSF-209ENST00000410041 KIF27Q86VH2 1401 aa17.09■□□□□ 0.33
DYSF-209ENST00000410041 BECN1Q14457 450 aa17.09■□□□□ 0.33
DYSF-209ENST00000410041 KDM2AQ9Y2K7 1162 aa17.08■□□□□ 0.32
DYSF-209ENST00000410041 CECR2Q9BXF3 1484 aa17.08■□□□□ 0.32
DYSF-209ENST00000410041 ARXQ96QS3 562 aa17.07■□□□□ 0.32
DYSF-209ENST00000410041 LAS1LQ9Y4W2 734 aaKnown RBP17.04■□□□□ 0.32
DYSF-209ENST00000410041 BAZ1AQ9NRL2 1556 aaPredicted RBP17.04■□□□□ 0.32
DYSF-209ENST00000410041 TSPY4P0CV99 314 aa17.04■□□□□ 0.32
DYSF-209ENST00000410041 TSPY10P0CW01 314 aa17.04■□□□□ 0.32
DYSF-209ENST00000410041 SETD5Q9C0A6 1442 aa17■□□□□ 0.31
DYSF-209ENST00000410041 NACADO15069 1562 aa17■□□□□ 0.31
DYSF-209ENST00000410041 RTN4Q9NQC3 1192 aaKnown RBP16.99■□□□□ 0.31
DYSF-209ENST00000410041 SENP3-EIF4A1A0A087X0R7 540 aa16.97■□□□□ 0.31
DYSF-209ENST00000410041 CCDC88BA6NC98 1476 aa16.96■□□□□ 0.31
DYSF-209ENST00000410041 KANK4Q5T7N3 995 aaPredicted RBP16.95■□□□□ 0.3
DYSF-209ENST00000410041 TRIM44Q96DX7 344 aaPredicted RBP16.94■□□□□ 0.3
DYSF-209ENST00000410041 FHAD1B1AJZ9 1412 aa16.94■□□□□ 0.3
DYSF-209ENST00000410041 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.93■□□□□ 0.3
DYSF-209ENST00000410041 CARD11Q9BXL7 1154 aa16.93■□□□□ 0.3
DYSF-209ENST00000410041 BAZ1BQ9UIG0 1483 aaKnown RBP16.92■□□□□ 0.3
DYSF-209ENST00000410041 RAB3GAP2Q9H2M9 1393 aa16.91■□□□□ 0.3
DYSF-209ENST00000410041 MROH2BQ7Z745 1585 aa16.9■□□□□ 0.3
DYSF-209ENST00000410041 HSPA5P11021 654 aaKnown RBP16.9■□□□□ 0.3
DYSF-209ENST00000410041 PPP1R15AO75807 674 aaPredicted RBP16.89■□□□□ 0.29
DYSF-209ENST00000410041 ABCC8Q09428 1581 aa16.88■□□□□ 0.29
DYSF-209ENST00000410041 CHGAP10645 457 aaKnown RBP16.87■□□□□ 0.29
DYSF-209ENST00000410041 SLC24A1O60721 1099 aa16.87■□□□□ 0.29
DYSF-209ENST00000410041 DHX57Q6P158 1386 aaKnown RBP16.86■□□□□ 0.29
DYSF-209ENST00000410041 GOLGA6L22H0YM25 854 aa16.86■□□□□ 0.29
DYSF-209ENST00000410041 RGS3P49796 1198 aa16.86■□□□□ 0.29
DYSF-209ENST00000410041 KNSTRNQ9Y448 316 aa16.84■□□□□ 0.29
DYSF-209ENST00000410041 CDCA8Q53HL2 280 aa16.83■□□□□ 0.29
DYSF-209ENST00000410041 IPO9Q96P70 1041 aaKnown RBP16.81■□□□□ 0.28
DYSF-209ENST00000410041 MYH16Q9H6N6 1097 aa16.81■□□□□ 0.28
DYSF-209ENST00000410041 TCERG1O14776 1098 aaKnown RBP16.81■□□□□ 0.28
DYSF-209ENST00000410041 CFDP1Q9UEE9 299 aaPredicted RBP16.8■□□□□ 0.28
DYSF-209ENST00000410041 NAP1L5Q96NT1 182 aaPredicted RBP16.8■□□□□ 0.28
DYSF-209ENST00000410041 RGL3Q3MIN7 710 aa16.8■□□□□ 0.28
DYSF-209ENST00000410041 KCNH8Q96L42 1107 aa16.79■□□□□ 0.28
DYSF-209ENST00000410041 CARMIL1Q5VZK9 1371 aa16.79■□□□□ 0.28
DYSF-209ENST00000410041 ARHGAP35Q9NRY4 1499 aa16.78■□□□□ 0.28
DYSF-209ENST00000410041 FANCIQ9NVI1 1328 aa16.77■□□□□ 0.28
DYSF-209ENST00000410041 PLEKHD1A6NEE1 506 aa16.75■□□□□ 0.27
DYSF-209ENST00000410041 L1TD1Q5T7N2 865 aaKnown RBP16.75■□□□□ 0.27
DYSF-209ENST00000410041 NUDCQ9Y266 331 aa16.74■□□□□ 0.27
DYSF-209ENST00000410041 CFAP53Q96M91 514 aa16.73■□□□□ 0.27
DYSF-209ENST00000410041 RCAN3Q9UKA8 241 aa16.72■□□□□ 0.27
DYSF-209ENST00000410041 CUX2O14529 1486 aa16.71■□□□□ 0.27
DYSF-209ENST00000410041 FTSJ3Q8IY81 847 aaKnown RBP16.7■□□□□ 0.26
DYSF-209ENST00000410041 NCLP19338 710 aaKnown RBP16.7■□□□□ 0.26
DYSF-209ENST00000410041 CC2D1BQ5T0F9 858 aaKnown RBP16.7■□□□□ 0.26
DYSF-209ENST00000410041 FRAT1Q92837 279 aaPredicted RBP16.68■□□□□ 0.26
DYSF-209ENST00000410041 CHMP7Q8WUX9 453 aaPredicted RBP16.67■□□□□ 0.26
DYSF-209ENST00000410041 USP35Q9P2H5 1018 aa16.67■□□□□ 0.26
DYSF-209ENST00000410041 RALBP1Q15311 655 aa16.66■□□□□ 0.26
DYSF-209ENST00000410041 TOP2AP11388 1531 aaKnown RBP16.65■□□□□ 0.26
DYSF-209ENST00000410041 NEUROD2Q15784 382 aa16.65■□□□□ 0.26
DYSF-209ENST00000410041 FMN1Q68DA7 1419 aa16.65■□□□□ 0.26
DYSF-209ENST00000410041 PTMAP06454 111 aaKnown RBP16.65■□□□□ 0.26
DYSF-209ENST00000410041 MS4A1P11836 297 aa16.65■□□□□ 0.26
DYSF-209ENST00000410041 TMF1P82094 1093 aa16.65■□□□□ 0.26
DYSF-209ENST00000410041 STAG3Q9UJ98 1225 aa16.65■□□□□ 0.26
DYSF-209ENST00000410041 TNNT2P45379 298 aaPredicted RBP16.65■□□□□ 0.26
DYSF-209ENST00000410041 DCAF11Q8TEB1 546 aa16.64■□□□□ 0.25
DYSF-209ENST00000410041 KTN1Q86UP2 1357 aaKnown RBP16.64■□□□□ 0.25
DYSF-209ENST00000410041 MPHOSPH9Q99550 1183 aa16.64■□□□□ 0.25
DYSF-209ENST00000410041 RAPGEF2Q9Y4G8 1499 aa16.64■□□□□ 0.25
DYSF-209ENST00000410041 L3MBTL2Q969R5 705 aa16.61■□□□□ 0.25
DYSF-209ENST00000410041 PDE3BQ13370 1112 aa16.61■□□□□ 0.25
DYSF-209ENST00000410041 HSCBQ8IWL3 235 aa16.6■□□□□ 0.25
DYSF-209ENST00000410041 ZBED9Q6R2W3 1325 aa16.6■□□□□ 0.25
DYSF-209ENST00000410041 HSP90AB1P08238 724 aaKnown RBP16.6■□□□□ 0.25
DYSF-209ENST00000410041 FOXD1Q16676 465 aa16.59■□□□□ 0.25
DYSF-209ENST00000410041 RUSC2Q8N2Y8 1516 aa16.59■□□□□ 0.25
DYSF-209ENST00000410041 WIZO95785 1651 aa16.58■□□□□ 0.25
DYSF-209ENST00000410041 CASC1Q6TDU7 716 aa16.58■□□□□ 0.25
DYSF-209ENST00000410041 DNTTIP2Q5QJE6 756 aaKnown RBP16.58■□□□□ 0.25
DYSF-209ENST00000410041 PRKRIP1Q9H875 184 aaPredicted RBP16.58■□□□□ 0.25
DYSF-209ENST00000410041 CHMP4BQ9H444 224 aaKnown RBP16.58■□□□□ 0.24
DYSF-209ENST00000410041 PKD2Q13563 968 aa16.57■□□□□ 0.24
DYSF-209ENST00000410041 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.57■□□□□ 0.24
DYSF-209ENST00000410041 MAPK8IP3Q9UPT6 1336 aa16.56■□□□□ 0.24
DYSF-209ENST00000410041 PNNQ9H307 717 aaKnown RBP16.56■□□□□ 0.24
DYSF-209ENST00000410041 ROCK2O75116 1388 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms