RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 CEP170Q5SW79 1584 aa20.2■□□□□ 0.82
PMS1-204ENST00000409823 CEP162Q5TB80 1403 aa20.19■□□□□ 0.82
PMS1-204ENST00000409823 P3H3Q8IVL6 736 aa20.16■□□□□ 0.82
PMS1-204ENST00000409823 NUP160Q12769 1436 aa20.16■□□□□ 0.82
PMS1-204ENST00000409823 CTTNBP2Q8WZ74 1663 aa20.13■□□□□ 0.81
PMS1-204ENST00000409823 CLIP1P30622 1438 aa20.13■□□□□ 0.81
PMS1-204ENST00000409823 KIAA0586Q9BVV6 1533 aa20.12■□□□□ 0.81
PMS1-204ENST00000409823 OSCARQ8IYS5 282 aa20.11■□□□□ 0.81
PMS1-204ENST00000409823 IQGAP2Q13576 1575 aa20.1■□□□□ 0.81
PMS1-204ENST00000409823 JPH4Q96JJ6 628 aa20.08■□□□□ 0.81
PMS1-204ENST00000409823 TTBK1Q5TCY1 1321 aaPredicted RBP20.08■□□□□ 0.81
PMS1-204ENST00000409823 ARHGAP35Q9NRY4 1499 aa20.04■□□□□ 0.8
PMS1-204ENST00000409823 FHOD3Q2V2M9 1422 aa20■□□□□ 0.79
PMS1-204ENST00000409823 ARAP1Q96P48 1450 aa19.99■□□□□ 0.79
PMS1-204ENST00000409823 CLASP1Q7Z460 1538 aa19.98■□□□□ 0.79
PMS1-204ENST00000409823 PRG4Q92954 1404 aaPredicted RBP19.97■□□□□ 0.79
PMS1-204ENST00000409823 UGGT2Q9NYU1 1516 aa19.96■□□□□ 0.79
PMS1-204ENST00000409823 DISP1Q96F81 1524 aa19.96■□□□□ 0.79
PMS1-204ENST00000409823 SAMD9Q5K651 1589 aa19.92■□□□□ 0.78
PMS1-204ENST00000409823 ERCC6L2Q5T890 1561 aa19.92■□□□□ 0.78
PMS1-204ENST00000409823 EFCAB5A4FU69 1503 aa19.91■□□□□ 0.78
PMS1-204ENST00000409823 ATP1B4Q9UN42 357 aaPredicted RBP19.9■□□□□ 0.78
PMS1-204ENST00000409823 CARMIL2Q6F5E8 1435 aa19.9■□□□□ 0.78
PMS1-204ENST00000409823 KIAA0556O60303 1618 aa19.89■□□□□ 0.77
PMS1-204ENST00000409823 SHROOM2Q13796 1616 aa19.87■□□□□ 0.77
PMS1-204ENST00000409823 VPS8Q8N3P4 1428 aa19.85■□□□□ 0.77
PMS1-204ENST00000409823 ARID3CA6NKF2 412 aa19.84■□□□□ 0.77
PMS1-204ENST00000409823 PPARGC1BQ86YN6 1023 aaKnown RBP19.84■□□□□ 0.77
PMS1-204ENST00000409823 PTPRGP23470 1445 aa19.79■□□□□ 0.76
PMS1-204ENST00000409823 FMN1Q68DA7 1419 aa19.79■□□□□ 0.76
PMS1-204ENST00000409823 PLB1Q6P1J6 1458 aa19.77■□□□□ 0.75
PMS1-204ENST00000409823 PCF11O94913 1555 aaKnown RBP19.75■□□□□ 0.75
PMS1-204ENST00000409823 ARHGEF11O15085 1522 aa19.73■□□□□ 0.75
PMS1-204ENST00000409823 APLP2Q06481 763 aa19.72■□□□□ 0.75
PMS1-204ENST00000409823 CASKIN1Q8WXD9 1431 aa19.7■□□□□ 0.74
PMS1-204ENST00000409823 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.69■□□□□ 0.74
PMS1-204ENST00000409823 HNRNPUL2Q1KMD3 747 aaKnown RBP19.69■□□□□ 0.74
PMS1-204ENST00000409823 CYB5RLQ6IPT4 315 aa19.69■□□□□ 0.74
PMS1-204ENST00000409823 FYCO1Q9BQS8 1478 aa19.67■□□□□ 0.74
PMS1-204ENST00000409823 KANK4Q5T7N3 995 aaPredicted RBP19.65■□□□□ 0.74
PMS1-204ENST00000409823 RIMBP3CA6NJZ7 1639 aa19.64■□□□□ 0.74
PMS1-204ENST00000409823 RIMBP3BA6NNM3 1639 aa19.64■□□□□ 0.74
PMS1-204ENST00000409823 RAPGEF6Q8TEU7 1601 aa19.64■□□□□ 0.74
PMS1-204ENST00000409823 RIMBP3Q9UFD9 1639 aa19.64■□□□□ 0.74
PMS1-204ENST00000409823 UACAQ9BZF9 1416 aa19.64■□□□□ 0.73
PMS1-204ENST00000409823 NUP153P49790 1475 aaKnown RBP19.64■□□□□ 0.73
PMS1-204ENST00000409823 CDK13Q14004 1512 aaKnown RBP19.62■□□□□ 0.73
PMS1-204ENST00000409823 ABCA8O94911 1581 aa19.62■□□□□ 0.73
PMS1-204ENST00000409823 HECW1Q76N89 1606 aa19.6■□□□□ 0.73
PMS1-204ENST00000409823 EPRSP07814 1512 aaKnown RBP19.59■□□□□ 0.73
PMS1-204ENST00000409823 LRRIQ1Q96JM4 1722 aa19.59■□□□□ 0.73
PMS1-204ENST00000409823 ABCC2Q92887 1545 aa19.56■□□□□ 0.72
PMS1-204ENST00000409823 TIAM1Q13009 1591 aa19.55■□□□□ 0.72
PMS1-204ENST00000409823 ATP10BO94823 1461 aa19.55■□□□□ 0.72
PMS1-204ENST00000409823 ADCY10Q96PN6 1610 aa19.53■□□□□ 0.72
PMS1-204ENST00000409823 CCDC18Q5T9S5 1454 aa19.52■□□□□ 0.72
PMS1-204ENST00000409823 DNAJC5Q9H3Z4 198 aa19.52■□□□□ 0.72
PMS1-204ENST00000409823 MTUS2Q5JR59 1369 aa19.51■□□□□ 0.71
PMS1-204ENST00000409823 LRRC9Q6ZRR7 1453 aa19.5■□□□□ 0.71
PMS1-204ENST00000409823 MAGI3Q5TCQ9 1506 aa19.49■□□□□ 0.71
PMS1-204ENST00000409823 UHRF1BP1LA0JNW5 1464 aa19.49■□□□□ 0.71
PMS1-204ENST00000409823 CFAP43Q8NDM7 1665 aa19.48■□□□□ 0.71
PMS1-204ENST00000409823 NPM1P06748 294 aaKnown RBP eCLIP19.47■□□□□ 0.71
PMS1-204ENST00000409823 CDK11AQ9UQ88 783 aaPredicted RBP19.47■□□□□ 0.71
PMS1-204ENST00000409823 PLEKHD1A6NEE1 506 aa19.47■□□□□ 0.71
PMS1-204ENST00000409823 MAP3K1Q13233 1512 aa19.46■□□□□ 0.71
PMS1-204ENST00000409823 KCNH8Q96L42 1107 aa19.45■□□□□ 0.7
PMS1-204ENST00000409823 KDM5BQ9UGL1 1544 aa19.45■□□□□ 0.7
PMS1-204ENST00000409823 ZCCHC11Q5TAX3 1644 aaKnown RBP19.44■□□□□ 0.7
PMS1-204ENST00000409823 TROQ12816 1431 aaPredicted RBP19.38■□□□□ 0.69
PMS1-204ENST00000409823 EHBP1L1Q8N3D4 1523 aa19.37■□□□□ 0.69
PMS1-204ENST00000409823 PHLDB1Q86UU1 1377 aa19.36■□□□□ 0.69
PMS1-204ENST00000409823 ASXL2Q76L83 1435 aa19.36■□□□□ 0.69
PMS1-204ENST00000409823 NCOA2Q15596 1464 aa19.35■□□□□ 0.69
PMS1-204ENST00000409823 KIF14Q15058 1648 aa19.34■□□□□ 0.69
PMS1-204ENST00000409823 WDR7Q9Y4E6 1490 aa19.31■□□□□ 0.68
PMS1-204ENST00000409823 SUPT6HQ7KZ85 1726 aaKnown RBP19.3■□□□□ 0.68
PMS1-204ENST00000409823 PCGF6Q9BYE7 350 aa19.29■□□□□ 0.68
PMS1-204ENST00000409823 TRIM26Q12899 539 aaPredicted RBP19.28■□□□□ 0.68
PMS1-204ENST00000409823 CCNB3Q8WWL7 1395 aa19.27■□□□□ 0.68
PMS1-204ENST00000409823 FAM50AQ14320 339 aaKnown RBP19.25■□□□□ 0.67
PMS1-204ENST00000409823 ZNF777Q9ULD5 760 aaPredicted RBP19.25■□□□□ 0.67
PMS1-204ENST00000409823 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.23■□□□□ 0.67
PMS1-204ENST00000409823 ITGAEP38570 1179 aa19.23■□□□□ 0.67
PMS1-204ENST00000409823 MYOM3Q5VTT5 1437 aa19.23■□□□□ 0.67
PMS1-204ENST00000409823 ABCC10Q5T3U5 1492 aa19.22■□□□□ 0.67
PMS1-204ENST00000409823 TTC37Q6PGP7 1564 aa19.22■□□□□ 0.67
PMS1-204ENST00000409823 CFDP1Q9UEE9 299 aaPredicted RBP19.22■□□□□ 0.67
PMS1-204ENST00000409823 ZNF644Q9H582 1327 aaPredicted RBP19.22■□□□□ 0.67
PMS1-204ENST00000409823 MAPKBP1O60336 1514 aa19.21■□□□□ 0.67
PMS1-204ENST00000409823 GPATCH8Q9UKJ3 1502 aaKnown RBP19.21■□□□□ 0.67
PMS1-204ENST00000409823 FAM69CQ0P6D2 419 aa19.2■□□□□ 0.66
PMS1-204ENST00000409823 FGD6Q6ZV73 1430 aa19.2■□□□□ 0.66
PMS1-204ENST00000409823 RRBP1Q9P2E9 1410 aaKnown RBP19.16■□□□□ 0.66
PMS1-204ENST00000409823 CDC42BPAQ5VT25 1732 aa19.14■□□□□ 0.65
PMS1-204ENST00000409823 ARHGAP5Q13017 1502 aa19.12■□□□□ 0.65
PMS1-204ENST00000409823 CD109Q6YHK3 1445 aa19.12■□□□□ 0.65
PMS1-204ENST00000409823 PLCH2O75038 1416 aa19.11■□□□□ 0.65
PMS1-204ENST00000409823 TRHP20396 242 aaPredicted RBP19.11■□□□□ 0.65
PMS1-204ENST00000409823 ABCA9Q8IUA7 1624 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms