RNA–Protein interactions for RNA: ENST00000409767.5

PBRM1-207, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-207ENST00000409767 EEA1Q15075 1411 aa9.07□□□□□ -0.96
PBRM1-207ENST00000409767 RAD54L2Q9Y4B4 1467 aa9.07□□□□□ -0.96
PBRM1-207ENST00000409767 PEG3Q9GZU2 1588 aa9.05□□□□□ -0.96
PBRM1-207ENST00000409767 TSPY4P0CV99 314 aa9.04□□□□□ -0.96
PBRM1-207ENST00000409767 TSPY10P0CW01 314 aa9.04□□□□□ -0.96
PBRM1-207ENST00000409767 NEFLP07196 543 aa9.04□□□□□ -0.96
PBRM1-207ENST00000409767 FHAD1B1AJZ9 1412 aa9.03□□□□□ -0.96
PBRM1-207ENST00000409767 DNMBPQ6XZF7 1577 aa9.03□□□□□ -0.96
PBRM1-207ENST00000409767 POLR3GLQ9BT43 218 aa9.01□□□□□ -0.97
PBRM1-207ENST00000409767 SNAPC4Q5SXM2 1469 aa9.01□□□□□ -0.97
PBRM1-207ENST00000409767 GOLGA3Q08378 1498 aa9□□□□□ -0.97
PBRM1-207ENST00000409767 MLECQ14165 292 aa9□□□□□ -0.97
PBRM1-207ENST00000409767 POLA1P09884 1462 aaPredicted RBP8.99□□□□□ -0.97
PBRM1-207ENST00000409767 MTUS2Q5JR59 1369 aa8.99□□□□□ -0.97
PBRM1-207ENST00000409767 PRG4Q92954 1404 aaPredicted RBP8.98□□□□□ -0.97
PBRM1-207ENST00000409767 EFCAB2Q5VUJ9 269 aa8.98□□□□□ -0.97
PBRM1-207ENST00000409767 SYNJ1O43426 1573 aa8.98□□□□□ -0.97
PBRM1-207ENST00000409767 MAGI1Q96QZ7 1491 aaPredicted RBP8.97□□□□□ -0.97
PBRM1-207ENST00000409767 CLIP1P30622 1438 aa8.97□□□□□ -0.97
PBRM1-207ENST00000409767 URB2Q14146 1524 aaKnown RBP8.96□□□□□ -0.97
PBRM1-207ENST00000409767 SLC4A1APQ9BWU0 796 aaKnown RBP8.96□□□□□ -0.97
PBRM1-207ENST00000409767 SYNJ2O15056 1496 aa8.96□□□□□ -0.98
PBRM1-207ENST00000409767 ACIN1Q9UKV3 1341 aaKnown RBP8.96□□□□□ -0.98
PBRM1-207ENST00000409767 TNIKQ9UKE5 1360 aa8.95□□□□□ -0.98
PBRM1-207ENST00000409767 RAPGEF2Q9Y4G8 1499 aa8.95□□□□□ -0.98
PBRM1-207ENST00000409767 CFDP1Q9UEE9 299 aaPredicted RBP8.94□□□□□ -0.98
PBRM1-207ENST00000409767 CHGAP10645 457 aaKnown RBP8.94□□□□□ -0.98
PBRM1-207ENST00000409767 WDR62O43379 1518 aa8.93□□□□□ -0.98
PBRM1-207ENST00000409767 ZNF608Q9ULD9 1512 aaPredicted RBP8.91□□□□□ -0.98
PBRM1-207ENST00000409767 PPP1R15AO75807 674 aaPredicted RBP8.9□□□□□ -0.99
PBRM1-207ENST00000409767 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.9□□□□□ -0.991e-6■■■□□ 19.2
PBRM1-207ENST00000409767 C14orf37Q86TY3 774 aa8.89□□□□□ -0.99
PBRM1-207ENST00000409767 HRCP23327 699 aa8.89□□□□□ -0.99
PBRM1-207ENST00000409767 NEUROD1Q13562 356 aa8.89□□□□□ -0.99
PBRM1-207ENST00000409767 SCAF1Q9H7N4 1312 aaKnown RBP8.88□□□□□ -0.99
PBRM1-207ENST00000409767 IGF1RP08069 1367 aa8.88□□□□□ -0.99
PBRM1-207ENST00000409767 KIF21AQ7Z4S6 1674 aa8.88□□□□□ -0.99
PBRM1-207ENST00000409767 CCNB3Q8WWL7 1395 aa8.87□□□□□ -0.99
PBRM1-207ENST00000409767 HDGFP51858 240 aaKnown RBP8.86□□□□□ -0.99
PBRM1-207ENST00000409767 ABCA10Q8WWZ4 1543 aa8.86□□□□□ -0.99
PBRM1-207ENST00000409767 FMN1Q68DA7 1419 aa8.85□□□□□ -0.99
PBRM1-207ENST00000409767 ZNF326Q5BKZ1 582 aaKnown RBP8.85□□□□□ -0.99
PBRM1-207ENST00000409767 CUX1P39880 1505 aa8.84□□□□□ -0.99
PBRM1-207ENST00000409767 GRIN2AQ12879 1464 aa8.84□□□□□ -0.99
PBRM1-207ENST00000409767 ERICH6Q7L0X2 663 aa8.83□□□□□ -1
PBRM1-207ENST00000409767 GGT6Q6P531 493 aa8.83□□□□□ -1
PBRM1-207ENST00000409767 KIAA0586Q9BVV6 1533 aa8.82□□□□□ -1
PBRM1-207ENST00000409767 NEFMP07197 916 aa8.82□□□□□ -1
PBRM1-207ENST00000409767 YTHDC1Q96MU7 727 aaKnown RBP8.82□□□□□ -1
PBRM1-207ENST00000409767 POGZQ7Z3K3 1410 aa8.81□□□□□ -1
PBRM1-207ENST00000409767 KANK1Q14678 1352 aa8.8□□□□□ -1
PBRM1-207ENST00000409767 SPAG9O60271 1321 aaKnown RBP8.79□□□□□ -1
PBRM1-207ENST00000409767 UACAQ9BZF9 1416 aa8.79□□□□□ -1
PBRM1-207ENST00000409767 RSPH4AQ5TD94 716 aa8.78□□□□□ -1
PBRM1-207ENST00000409767 CHIC2Q9UKJ5 165 aa8.78□□□□□ -1
PBRM1-207ENST00000409767 ERICH3Q5RHP9 1530 aa8.78□□□□□ -1
PBRM1-207ENST00000409767 ANP32CO43423 234 aa8.77□□□□□ -1.01
PBRM1-207ENST00000409767 PLB1Q6P1J6 1458 aa8.77□□□□□ -1.01
PBRM1-207ENST00000409767 TONSLQ96HA7 1378 aa8.77□□□□□ -1.01
PBRM1-207ENST00000409767 TOP2BQ02880 1626 aa8.77□□□□□ -1.01
PBRM1-207ENST00000409767 CNGB1Q14028 1251 aaPredicted RBP8.77□□□□□ -1.01
PBRM1-207ENST00000409767 THOC2Q8NI27 1593 aaKnown RBP8.76□□□□□ -1.01
PBRM1-207ENST00000409767 EID1Q9Y6B2 187 aa8.76□□□□□ -1.01
PBRM1-207ENST00000409767 TEX14Q8IWB6 1497 aa8.75□□□□□ -1.01
PBRM1-207ENST00000409767 EIF4G3O43432 1585 aaKnown RBP8.75□□□□□ -1.01
PBRM1-207ENST00000409767 FHOD3Q2V2M9 1422 aa8.74□□□□□ -1.01
PBRM1-207ENST00000409767 HAP1P54257 671 aaPredicted RBP8.74□□□□□ -1.01
PBRM1-207ENST00000409767 CEP162Q5TB80 1403 aa8.73□□□□□ -1.01
PBRM1-207ENST00000409767 CD109Q6YHK3 1445 aa8.73□□□□□ -1.01
PBRM1-207ENST00000409767 DIEXFQ68CQ4 756 aaKnown RBP8.73□□□□□ -1.01
PBRM1-207ENST00000409767 DMRT2Q9Y5R5 561 aa8.73□□□□□ -1.01
PBRM1-207ENST00000409767 CCDC18Q5T9S5 1454 aa8.73□□□□□ -1.01
PBRM1-207ENST00000409767 WASHC2CQ9Y4E1 1318 aa8.72□□□□□ -1.01
PBRM1-207ENST00000409767 ARHGEF11O15085 1522 aa8.72□□□□□ -1.01
PBRM1-207ENST00000409767 KIF3BO15066 747 aa8.72□□□□□ -1.01
PBRM1-207ENST00000409767 WDR97A6NE52 1622 aa8.71□□□□□ -1.01
PBRM1-207ENST00000409767 DAXXQ9UER7 740 aaPredicted RBP8.7□□□□□ -1.02
PBRM1-207ENST00000409767 SENP3Q9H4L4 574 aaPredicted RBP8.7□□□□□ -1.02
PBRM1-207ENST00000409767 PRDM2Q13029 1718 aa8.69□□□□□ -1.02
PBRM1-207ENST00000409767 CUL7Q14999 1698 aa8.68□□□□□ -1.02
PBRM1-207ENST00000409767 ZNF316A6NFI3 1004 aaPredicted RBP8.68□□□□□ -1.02
PBRM1-207ENST00000409767 HNRNPMP52272 730 aaKnown RBP eCLIP8.68□□□□□ -1.02
PBRM1-207ENST00000409767 IQGAP2Q13576 1575 aa8.68□□□□□ -1.02
PBRM1-207ENST00000409767 PHLDB1Q86UU1 1377 aa8.67□□□□□ -1.02
PBRM1-207ENST00000409767 ZBTB47Q9UFB7 747 aaPredicted RBP8.67□□□□□ -1.02
PBRM1-207ENST00000409767 RAPGEF3O95398 923 aa8.66□□□□□ -1.02
PBRM1-207ENST00000409767 RRP7BPQ9NSQ0 103 aa8.66□□□□□ -1.02
PBRM1-207ENST00000409767 ASXL2Q76L83 1435 aa8.64□□□□□ -1.03
PBRM1-207ENST00000409767 PHF23Q9BUL5 403 aaPredicted RBP8.64□□□□□ -1.03
PBRM1-207ENST00000409767 NUP160Q12769 1436 aa8.63□□□□□ -1.03
PBRM1-207ENST00000409767 AKNAQ7Z591 1439 aa8.63□□□□□ -1.03
PBRM1-207ENST00000409767 SLC24A1O60721 1099 aa8.62□□□□□ -1.03
PBRM1-207ENST00000409767 CLSPNQ9HAW4 1339 aa8.61□□□□□ -1.03
PBRM1-207ENST00000409767 CDCA8Q53HL2 280 aa8.61□□□□□ -1.03
PBRM1-207ENST00000409767 ADAMTS12P58397 1594 aa8.61□□□□□ -1.03
PBRM1-207ENST00000409767 RUSC2Q8N2Y8 1516 aa8.61□□□□□ -1.03
PBRM1-207ENST00000409767 ANKRD30AQ9BXX3 1397 aa8.61□□□□□ -1.03
PBRM1-207ENST00000409767 THEMISQ8N1K5 641 aaPredicted RBP8.61□□□□□ -1.03
PBRM1-207ENST00000409767 SCAPERQ9BY12 1400 aa8.61□□□□□ -1.03
PBRM1-207ENST00000409767 ARHGAP5Q13017 1502 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms