RNA–Protein interactions for RNA: ENST00000409583.5

ITGB6-202, Transcript of integrin subunit beta 6, humanhuman

TSL 3

Gene ITGB6, Length 4,500 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB6-202ENST00000409583 HIRIP3Q9BW71 556 aaPredicted RBP12.6□□□□□ -0.39
ITGB6-202ENST00000409583 CEP164Q9UPV0 1460 aa12.6□□□□□ -0.39
ITGB6-202ENST00000409583 STAG3Q9UJ98 1225 aa12.58□□□□□ -0.39
ITGB6-202ENST00000409583 KDM2AQ9Y2K7 1162 aa12.58□□□□□ -0.39
ITGB6-202ENST00000409583 CARMIL1Q5VZK9 1371 aa12.57□□□□□ -0.4
ITGB6-202ENST00000409583 TDRD9Q8NDG6 1382 aaKnown RBP12.57□□□□□ -0.4
ITGB6-202ENST00000409583 DDX10Q13206 875 aaKnown RBP12.57□□□□□ -0.4
ITGB6-202ENST00000409583 SMARCA2P51531 1590 aa12.55□□□□□ -0.4
ITGB6-202ENST00000409583 CFDP1Q9UEE9 299 aaPredicted RBP12.53□□□□□ -0.4
ITGB6-202ENST00000409583 DAXXQ9UER7 740 aaPredicted RBP12.53□□□□□ -0.4
ITGB6-202ENST00000409583 ATAD2BQ9ULI0 1458 aa12.51□□□□□ -0.41
ITGB6-202ENST00000409583 EIF4G1Q04637 1599 aaKnown RBP12.49□□□□□ -0.41
ITGB6-202ENST00000409583 RGL3Q3MIN7 710 aa12.48□□□□□ -0.41
ITGB6-202ENST00000409583 CADPSQ9ULU8 1353 aa12.48□□□□□ -0.41
ITGB6-202ENST00000409583 PDS5BQ9NTI5 1447 aa12.47□□□□□ -0.41
ITGB6-202ENST00000409583 TOP2AP11388 1531 aaKnown RBP12.47□□□□□ -0.41
ITGB6-202ENST00000409583 SALL2Q9Y467 1007 aaPredicted RBP12.45□□□□□ -0.42
ITGB6-202ENST00000409583 SMARCA4P51532 1647 aa12.44□□□□□ -0.42
ITGB6-202ENST00000409583 KANK4Q5T7N3 995 aaPredicted RBP12.43□□□□□ -0.42
ITGB6-202ENST00000409583 FAM9BQ8IZU0 186 aa12.42□□□□□ -0.42
ITGB6-202ENST00000409583 SIN3AQ96ST3 1273 aa12.41□□□□□ -0.42
ITGB6-202ENST00000409583 NBR1Q14596 966 aa12.41□□□□□ -0.42
ITGB6-202ENST00000409583 RTN4Q9NQC3 1192 aaKnown RBP12.38□□□□□ -0.43
ITGB6-202ENST00000409583 RUSC2Q8N2Y8 1516 aa12.38□□□□□ -0.43
ITGB6-202ENST00000409583 HNRNPUQ00839 825 aaKnown RBP eCLIP12.38□□□□□ -0.43
ITGB6-202ENST00000409583 DEKP35659 375 aaKnown RBP12.37□□□□□ -0.43
ITGB6-202ENST00000409583 FHAD1B1AJZ9 1412 aa12.37□□□□□ -0.43
ITGB6-202ENST00000409583 NEFMP07197 916 aa12.36□□□□□ -0.43
ITGB6-202ENST00000409583 ARID4BQ4LE39 1312 aaPredicted RBP12.36□□□□□ -0.43
ITGB6-202ENST00000409583 MIER1Q8N108 512 aa12.35□□□□□ -0.43
ITGB6-202ENST00000409583 PODXL2Q9NZ53 605 aa12.35□□□□□ -0.43
ITGB6-202ENST00000409583 ERICH6BQ5W0A0 696 aa12.35□□□□□ -0.43
ITGB6-202ENST00000409583 CCDC136Q96JN2 1154 aa12.35□□□□□ -0.43
ITGB6-202ENST00000409583 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.35□□□□□ -0.43
ITGB6-202ENST00000409583 CCNB3Q8WWL7 1395 aa12.35□□□□□ -0.43
ITGB6-202ENST00000409583 CANXP27824 592 aaKnown RBP12.35□□□□□ -0.43
ITGB6-202ENST00000409583 SENP3-EIF4A1A0A087X0R7 540 aa12.34□□□□□ -0.43
ITGB6-202ENST00000409583 PLEKHG5O94827 1062 aa12.34□□□□□ -0.43
ITGB6-202ENST00000409583 VPS8Q8N3P4 1428 aa12.34□□□□□ -0.43
ITGB6-202ENST00000409583 EIF4G2P78344 907 aaKnown RBP eCLIP12.34□□□□□ -0.43
ITGB6-202ENST00000409583 ANP32AP39687 249 aaKnown RBP12.32□□□□□ -0.44
ITGB6-202ENST00000409583 FKBP8Q14318 412 aa12.32□□□□□ -0.44
ITGB6-202ENST00000409583 TMC1Q8TDI8 760 aa12.32□□□□□ -0.44
ITGB6-202ENST00000409583 RAPGEF2Q9Y4G8 1499 aa12.32□□□□□ -0.44
ITGB6-202ENST00000409583 PKNOX2Q96KN3 472 aa12.31□□□□□ -0.44
ITGB6-202ENST00000409583 FANCD2Q9BXW9 1451 aa12.31□□□□□ -0.44
ITGB6-202ENST00000409583 PPP1R15AO75807 674 aaPredicted RBP12.3□□□□□ -0.44
ITGB6-202ENST00000409583 ANO8Q9HCE9 1232 aaPredicted RBP12.3□□□□□ -0.44
ITGB6-202ENST00000409583 MRS2Q9HD23 443 aa12.3□□□□□ -0.44
ITGB6-202ENST00000409583 FHOD3Q2V2M9 1422 aa12.29□□□□□ -0.44
ITGB6-202ENST00000409583 TRHP20396 242 aaPredicted RBP12.29□□□□□ -0.44
ITGB6-202ENST00000409583 MLECQ14165 292 aa12.28□□□□□ -0.44
ITGB6-202ENST00000409583 FOXD1Q16676 465 aa12.28□□□□□ -0.44
ITGB6-202ENST00000409583 JPH4Q96JJ6 628 aa12.27□□□□□ -0.45
ITGB6-202ENST00000409583 CARMIL2Q6F5E8 1435 aa12.25□□□□□ -0.45
ITGB6-202ENST00000409583 CARD11Q9BXL7 1154 aa12.24□□□□□ -0.45
ITGB6-202ENST00000409583 TSHZ2Q9NRE2 1034 aa12.23□□□□□ -0.45
ITGB6-202ENST00000409583 GGT6Q6P531 493 aa12.23□□□□□ -0.45
ITGB6-202ENST00000409583 ZBTB47Q9UFB7 747 aaPredicted RBP12.23□□□□□ -0.45
ITGB6-202ENST00000409583 SUPT16HQ9Y5B9 1047 aaKnown RBP12.22□□□□□ -0.45
ITGB6-202ENST00000409583 RAD54L2Q9Y4B4 1467 aa12.21□□□□□ -0.45
ITGB6-202ENST00000409583 FMN1Q68DA7 1419 aa12.2□□□□□ -0.46
ITGB6-202ENST00000409583 DCAF11Q8TEB1 546 aa12.2□□□□□ -0.46
ITGB6-202ENST00000409583 ARHGAP35Q9NRY4 1499 aa12.2□□□□□ -0.46
ITGB6-202ENST00000409583 WDR43Q15061 677 aaKnown RBP eCLIP12.19□□□□□ -0.46
ITGB6-202ENST00000409583 C14orf37Q86TY3 774 aa12.19□□□□□ -0.46
ITGB6-202ENST00000409583 NCAPD3P42695 1498 aa12.19□□□□□ -0.46
ITGB6-202ENST00000409583 IRX6P78412 446 aaPredicted RBP12.19□□□□□ -0.46
ITGB6-202ENST00000409583 FGD5Q6ZNL6 1462 aa12.18□□□□□ -0.46
ITGB6-202ENST00000409583 ZBTB7CA1YPR0 619 aa12.18□□□□□ -0.46
ITGB6-202ENST00000409583 PKD2Q13563 968 aa12.18□□□□□ -0.46
ITGB6-202ENST00000409583 HNRNPMP52272 730 aaKnown RBP eCLIP12.17□□□□□ -0.46
ITGB6-202ENST00000409583 DNAJC5BQ9UF47 199 aa12.17□□□□□ -0.46
ITGB6-202ENST00000409583 IGF1RP08069 1367 aa12.16□□□□□ -0.46
ITGB6-202ENST00000409583 NESP48681 1621 aa12.15□□□□□ -0.46
ITGB6-202ENST00000409583 RBM19Q9Y4C8 960 aaKnown RBP12.15□□□□□ -0.46
ITGB6-202ENST00000409583 SETD5Q9C0A6 1442 aa12.15□□□□□ -0.46
ITGB6-202ENST00000409583 EFCAB2Q5VUJ9 269 aa12.15□□□□□ -0.46
ITGB6-202ENST00000409583 RAB3GAP2Q9H2M9 1393 aa12.14□□□□□ -0.47
ITGB6-202ENST00000409583 UBE2Q2Q8WVN8 375 aa12.14□□□□□ -0.47
ITGB6-202ENST00000409583 PPM1GO15355 546 aaPredicted RBP12.14□□□□□ -0.47
ITGB6-202ENST00000409583 VSIG10Q8N0Z9 540 aa12.13□□□□□ -0.47
ITGB6-202ENST00000409583 SAFB2Q14151 953 aaKnown RBP eCLIP12.13□□□□□ -0.47
ITGB6-202ENST00000409583 CYB5RLQ6IPT4 315 aa12.13□□□□□ -0.47
ITGB6-202ENST00000409583 AQRO60306 1485 aaKnown RBP eCLIP12.12□□□□□ -0.47
ITGB6-202ENST00000409583 TNNT2P45379 298 aaPredicted RBP12.12□□□□□ -0.47
ITGB6-202ENST00000409583 POGKQ9P215 609 aa12.11□□□□□ -0.47
ITGB6-202ENST00000409583 GAPVD1Q14C86 1478 aa12.11□□□□□ -0.47
ITGB6-202ENST00000409583 NPM2Q86SE8 214 aaKnown RBP12.11□□□□□ -0.47
ITGB6-202ENST00000409583 NUP155O75694 1391 aa12.1□□□□□ -0.47
ITGB6-202ENST00000409583 A0A0G2JS52 829 aa12.1□□□□□ -0.47
ITGB6-202ENST00000409583 MPHOSPH9Q99550 1183 aa12.1□□□□□ -0.47
ITGB6-202ENST00000409583 KNSTRNQ9Y448 316 aa12.1□□□□□ -0.47
ITGB6-202ENST00000409583 KIF3BO15066 747 aa12.1□□□□□ -0.47
ITGB6-202ENST00000409583 NEUROD2Q15784 382 aa12.08□□□□□ -0.48
ITGB6-202ENST00000409583 LMOD2Q6P5Q4 547 aa12.07□□□□□ -0.48
ITGB6-202ENST00000409583 CC2D1BQ5T0F9 858 aaKnown RBP12.07□□□□□ -0.48
ITGB6-202ENST00000409583 A0A0U1RQG5 324 aaPredicted RBP12.07□□□□□ -0.48
ITGB6-202ENST00000409583 PTPRGP23470 1445 aa12.07□□□□□ -0.48
ITGB6-202ENST00000409583 KANK1Q14678 1352 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms