RNA–Protein interactions for RNA: ENST00000409213.5

NCKAP5-204, Transcript of NCK associated protein 5, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NCKAP5, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP5-204ENST00000409213 CCDC88BA6NC98 1476 aa11.95□□□□□ -0.5
NCKAP5-204ENST00000409213 PLEKHG5O94827 1062 aa11.93□□□□□ -0.5
NCKAP5-204ENST00000409213 NEFMP07197 916 aa11.93□□□□□ -0.5
NCKAP5-204ENST00000409213 B4GALNT3Q6L9W6 998 aa11.93□□□□□ -0.5
NCKAP5-204ENST00000409213 SOGA1O94964 1423 aa11.93□□□□□ -0.5
NCKAP5-204ENST00000409213 HNRNPUQ00839 825 aaKnown RBP eCLIP11.93□□□□□ -0.5
NCKAP5-204ENST00000409213 CLIP1P30622 1438 aa11.93□□□□□ -0.5
NCKAP5-204ENST00000409213 CUX2O14529 1486 aa11.92□□□□□ -0.5
NCKAP5-204ENST00000409213 PPM1GO15355 546 aaPredicted RBP11.91□□□□□ -0.5
NCKAP5-204ENST00000409213 ZMYND15Q9H091 742 aa11.91□□□□□ -0.5
NCKAP5-204ENST00000409213 BRPF3Q9ULD4 1205 aa11.91□□□□□ -0.5
NCKAP5-204ENST00000409213 TIMELESSQ9UNS1 1208 aa11.89□□□□□ -0.51
NCKAP5-204ENST00000409213 FAM43AQ8N2R8 423 aa11.88□□□□□ -0.51
NCKAP5-204ENST00000409213 GSE1Q14687 1217 aa11.87□□□□□ -0.51
NCKAP5-204ENST00000409213 VSIG10Q8N0Z9 540 aa11.87□□□□□ -0.51
NCKAP5-204ENST00000409213 CEP164Q9UPV0 1460 aa11.87□□□□□ -0.51
NCKAP5-204ENST00000409213 WDR97A6NE52 1622 aa11.85□□□□□ -0.51
NCKAP5-204ENST00000409213 SCRIBQ14160 1630 aa11.83□□□□□ -0.52
NCKAP5-204ENST00000409213 MAPKBP1O60336 1514 aa11.82□□□□□ -0.52
NCKAP5-204ENST00000409213 LAS1LQ9Y4W2 734 aaKnown RBP11.82□□□□□ -0.52
NCKAP5-204ENST00000409213 RUSC2Q8N2Y8 1516 aa11.82□□□□□ -0.52
NCKAP5-204ENST00000409213 RRBP1Q9P2E9 1410 aaKnown RBP11.82□□□□□ -0.52
NCKAP5-204ENST00000409213 KIF21BO75037 1637 aa11.81□□□□□ -0.52
NCKAP5-204ENST00000409213 MROH2BQ7Z745 1585 aa11.8□□□□□ -0.52
NCKAP5-204ENST00000409213 WIZO95785 1651 aa11.8□□□□□ -0.52
NCKAP5-204ENST00000409213 BAZ1AQ9NRL2 1556 aaPredicted RBP11.79□□□□□ -0.52
NCKAP5-204ENST00000409213 NCAPD3P42695 1498 aa11.77□□□□□ -0.52
NCKAP5-204ENST00000409213 BAZ1BQ9UIG0 1483 aaKnown RBP11.77□□□□□ -0.52
NCKAP5-204ENST00000409213 SMARCA2P51531 1590 aa11.76□□□□□ -0.53
NCKAP5-204ENST00000409213 RRP9O43818 475 aaKnown RBP11.75□□□□□ -0.53
NCKAP5-204ENST00000409213 FRAT1Q92837 279 aaPredicted RBP11.75□□□□□ -0.53
NCKAP5-204ENST00000409213 CECR2Q9BXF3 1484 aa11.75□□□□□ -0.53
NCKAP5-204ENST00000409213 ZBED9Q6R2W3 1325 aa11.74□□□□□ -0.53
NCKAP5-204ENST00000409213 RAB3GAP2Q9H2M9 1393 aa11.74□□□□□ -0.53
NCKAP5-204ENST00000409213 HSP90AA2PQ14568 343 aaPredicted RBP11.74□□□□□ -0.53
NCKAP5-204ENST00000409213 NPM2Q86SE8 214 aaKnown RBP11.73□□□□□ -0.53
NCKAP5-204ENST00000409213 HIRIP3Q9BW71 556 aaPredicted RBP11.73□□□□□ -0.53
NCKAP5-204ENST00000409213 CCNB3Q8WWL7 1395 aa11.72□□□□□ -0.53
NCKAP5-204ENST00000409213 DDRGK1Q96HY6 314 aa11.71□□□□□ -0.53
NCKAP5-204ENST00000409213 NFKBIBQ15653 356 aa11.71□□□□□ -0.54
NCKAP5-204ENST00000409213 TCERG1O14776 1098 aaKnown RBP11.7□□□□□ -0.54
NCKAP5-204ENST00000409213 PEG3Q9GZU2 1588 aa11.69□□□□□ -0.54
NCKAP5-204ENST00000409213 SIN3AQ96ST3 1273 aa11.69□□□□□ -0.54
NCKAP5-204ENST00000409213 HSP90AA1P07900 732 aaKnown RBP11.68□□□□□ -0.54
NCKAP5-204ENST00000409213 SETD5Q9C0A6 1442 aa11.67□□□□□ -0.54
NCKAP5-204ENST00000409213 RNF123Q5XPI4 1314 aa11.66□□□□□ -0.54
NCKAP5-204ENST00000409213 PDE4AP27815 886 aa11.66□□□□□ -0.54
NCKAP5-204ENST00000409213 KANK4Q5T7N3 995 aaPredicted RBP11.65□□□□□ -0.54
NCKAP5-204ENST00000409213 MS4A1P11836 297 aa11.65□□□□□ -0.54
NCKAP5-204ENST00000409213 BACH2Q9BYV9 841 aa11.65□□□□□ -0.54
NCKAP5-204ENST00000409213 SMG6Q86US8 1419 aaKnown RBP11.65□□□□□ -0.54
NCKAP5-204ENST00000409213 DCAF11Q8TEB1 546 aa11.64□□□□□ -0.55
NCKAP5-204ENST00000409213 NAP1L5Q96NT1 182 aaPredicted RBP11.62□□□□□ -0.55
NCKAP5-204ENST00000409213 RRAGDQ9NQL2 400 aaPredicted RBP11.62□□□□□ -0.55
NCKAP5-204ENST00000409213 FAM9BQ8IZU0 186 aa11.61□□□□□ -0.55
NCKAP5-204ENST00000409213 TOP2AP11388 1531 aaKnown RBP11.61□□□□□ -0.55
NCKAP5-204ENST00000409213 RBM10P98175 930 aaKnown RBP11.61□□□□□ -0.55
NCKAP5-204ENST00000409213 NUDCQ9Y266 331 aa11.61□□□□□ -0.55
NCKAP5-204ENST00000409213 AKNAQ7Z591 1439 aa11.6□□□□□ -0.55
NCKAP5-204ENST00000409213 RAPGEF2Q9Y4G8 1499 aa11.6□□□□□ -0.55
NCKAP5-204ENST00000409213 FGD1P98174 961 aa11.6□□□□□ -0.55
NCKAP5-204ENST00000409213 AAMPQ13685 434 aa11.6□□□□□ -0.55
NCKAP5-204ENST00000409213 PNNQ9H307 717 aaKnown RBP11.59□□□□□ -0.55
NCKAP5-204ENST00000409213 FHAD1B1AJZ9 1412 aa11.58□□□□□ -0.56
NCKAP5-204ENST00000409213 TONSLQ96HA7 1378 aa11.58□□□□□ -0.56
NCKAP5-204ENST00000409213 SYNJ1O43426 1573 aa11.58□□□□□ -0.56
NCKAP5-204ENST00000409213 A0A0U1RQG5 324 aaPredicted RBP11.57□□□□□ -0.56
NCKAP5-204ENST00000409213 L1TD1Q5T7N2 865 aaKnown RBP11.57□□□□□ -0.56
NCKAP5-204ENST00000409213 MRS2Q9HD23 443 aa11.57□□□□□ -0.56
NCKAP5-204ENST00000409213 ARAP1Q96P48 1450 aa11.57□□□□□ -0.56
NCKAP5-204ENST00000409213 CCDC184Q52MB2 194 aa11.57□□□□□ -0.56
NCKAP5-204ENST00000409213 RANGAP1P46060 587 aaPredicted RBP11.56□□□□□ -0.56
NCKAP5-204ENST00000409213 CLCN1P35523 988 aa11.55□□□□□ -0.56
NCKAP5-204ENST00000409213 PRKRIP1Q9H875 184 aaPredicted RBP11.55□□□□□ -0.56
NCKAP5-204ENST00000409213 CNTLNQ9NXG0 1405 aa11.55□□□□□ -0.56
NCKAP5-204ENST00000409213 CENPJQ9HC77 1338 aaPredicted RBP11.55□□□□□ -0.56
NCKAP5-204ENST00000409213 PDE4CQ08493 712 aa11.54□□□□□ -0.56
NCKAP5-204ENST00000409213 NCOA2Q15596 1464 aa11.54□□□□□ -0.56
NCKAP5-204ENST00000409213 CALD1Q05682 793 aaKnown RBP11.53□□□□□ -0.56
NCKAP5-204ENST00000409213 FRAT2O75474 233 aaPredicted RBP11.53□□□□□ -0.56
NCKAP5-204ENST00000409213 PDCL3Q9H2J4 239 aa11.51□□□□□ -0.57
NCKAP5-204ENST00000409213 PRDM4Q9UKN5 801 aa11.48□□□□□ -0.57
NCKAP5-204ENST00000409213 SLC4A3P48751 1232 aa11.47□□□□□ -0.57
NCKAP5-204ENST00000409213 ERICH3Q5RHP9 1530 aa11.47□□□□□ -0.57
NCKAP5-204ENST00000409213 TPM2P07951 284 aa11.46□□□□□ -0.57
NCKAP5-204ENST00000409213 HSPA5P11021 654 aaKnown RBP11.46□□□□□ -0.58
NCKAP5-204ENST00000409213 RRP1P56182 461 aaKnown RBP11.45□□□□□ -0.58
NCKAP5-204ENST00000409213 EXOC6Q8TAG9 804 aa11.44□□□□□ -0.58
NCKAP5-204ENST00000409213 EIF4G2P78344 907 aaKnown RBP eCLIP11.43□□□□□ -0.58
NCKAP5-204ENST00000409213 MAP3K1Q13233 1512 aa11.43□□□□□ -0.58
NCKAP5-204ENST00000409213 POGKQ9P215 609 aa11.42□□□□□ -0.58
NCKAP5-204ENST00000409213 PDIA4P13667 645 aaKnown RBP11.42□□□□□ -0.58
NCKAP5-204ENST00000409213 CCDC7Q96M83 1385 aa11.4□□□□□ -0.58
NCKAP5-204ENST00000409213 NCOA1Q15788 1441 aa11.4□□□□□ -0.58
NCKAP5-204ENST00000409213 RGS3P49796 1198 aa11.4□□□□□ -0.58
NCKAP5-204ENST00000409213 GOLGA6L3A6NEY3 463 aa11.39□□□□□ -0.59
NCKAP5-204ENST00000409213 FAM50AQ14320 339 aaKnown RBP11.39□□□□□ -0.59
NCKAP5-204ENST00000409213 KDM5BQ9UGL1 1544 aa11.39□□□□□ -0.59
NCKAP5-204ENST00000409213 TIAM1Q13009 1591 aa11.38□□□□□ -0.59
NCKAP5-204ENST00000409213 XRCC6P12956 609 aaKnown RBP eCLIP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms