RNA–Protein interactions for RNA: ENST00000407439.7

MRE11-204, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 2 BASIC

Gene MRE11, Length 2,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-204ENST00000407439 MAP3K1Q13233 1512 aa9.73□□□□□ -0.85
MRE11-204ENST00000407439 EFCAB5A4FU69 1503 aa9.71□□□□□ -0.85
MRE11-204ENST00000407439 GAPVD1Q14C86 1478 aa9.7□□□□□ -0.86
MRE11-204ENST00000407439 FHAD1B1AJZ9 1412 aa9.7□□□□□ -0.86
MRE11-204ENST00000407439 TARBP1Q13395 1621 aaKnown RBP9.7□□□□□ -0.86
MRE11-204ENST00000407439 RRBP1Q9P2E9 1410 aaKnown RBP9.68□□□□□ -0.86
MRE11-204ENST00000407439 MRC2Q9UBG0 1479 aa9.68□□□□□ -0.86
MRE11-204ENST00000407439 TDRD9Q8NDG6 1382 aaKnown RBP9.68□□□□□ -0.86
MRE11-204ENST00000407439 CTTNBP2Q8WZ74 1663 aa9.68□□□□□ -0.86
MRE11-204ENST00000407439 KANK4Q5T7N3 995 aaPredicted RBP9.68□□□□□ -0.86
MRE11-204ENST00000407439 TIAM1Q13009 1591 aa9.67□□□□□ -0.86
MRE11-204ENST00000407439 AQRO60306 1485 aaKnown RBP eCLIP9.66□□□□□ -0.865e-7■■□□□ 13.1
MRE11-204ENST00000407439 FYCO1Q9BQS8 1478 aa9.65□□□□□ -0.87
MRE11-204ENST00000407439 PCF11O94913 1555 aaKnown RBP9.64□□□□□ -0.87
MRE11-204ENST00000407439 HNRNPUL2Q1KMD3 747 aaKnown RBP9.64□□□□□ -0.87
MRE11-204ENST00000407439 SLC4A1APQ9BWU0 796 aaKnown RBP9.64□□□□□ -0.87
MRE11-204ENST00000407439 WDR62O43379 1518 aa9.64□□□□□ -0.87
MRE11-204ENST00000407439 LRRC9Q6ZRR7 1453 aa9.63□□□□□ -0.87
MRE11-204ENST00000407439 CFAP43Q8NDM7 1665 aa9.63□□□□□ -0.87
MRE11-204ENST00000407439 FHOD3Q2V2M9 1422 aa9.63□□□□□ -0.87
MRE11-204ENST00000407439 FMN1Q68DA7 1419 aa9.63□□□□□ -0.87
MRE11-204ENST00000407439 CASKIN1Q8WXD9 1431 aa9.63□□□□□ -0.87
MRE11-204ENST00000407439 SAMD9Q5K651 1589 aa9.62□□□□□ -0.87
MRE11-204ENST00000407439 CCNB3Q8WWL7 1395 aa9.62□□□□□ -0.87
MRE11-204ENST00000407439 IFT140Q96RY7 1462 aa9.61□□□□□ -0.87
MRE11-204ENST00000407439 PBRM1Q86U86 1689 aa9.6□□□□□ -0.87
MRE11-204ENST00000407439 ADAMTS12P58397 1594 aa9.6□□□□□ -0.87
MRE11-204ENST00000407439 SNAPC4Q5SXM2 1469 aa9.6□□□□□ -0.87
MRE11-204ENST00000407439 GRIN2BQ13224 1484 aa9.59□□□□□ -0.87
MRE11-204ENST00000407439 CLSPNQ9HAW4 1339 aa9.59□□□□□ -0.87
MRE11-204ENST00000407439 THOC2Q8NI27 1593 aaKnown RBP9.57□□□□□ -0.88
MRE11-204ENST00000407439 P3H3Q8IVL6 736 aa9.56□□□□□ -0.88
MRE11-204ENST00000407439 PHLDB1Q86UU1 1377 aa9.56□□□□□ -0.88
MRE11-204ENST00000407439 IQGAP2Q13576 1575 aa9.55□□□□□ -0.88
MRE11-204ENST00000407439 ZNF608Q9ULD9 1512 aaPredicted RBP9.54□□□□□ -0.88
MRE11-204ENST00000407439 DHX57Q6P158 1386 aaKnown RBP9.54□□□□□ -0.88
MRE11-204ENST00000407439 PPP4R3CPQ6ZMV5 832 aa9.54□□□□□ -0.88
MRE11-204ENST00000407439 ERCC6Q03468 1493 aa9.53□□□□□ -0.88
MRE11-204ENST00000407439 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.53□□□□□ -0.88
MRE11-204ENST00000407439 UGGT2Q9NYU1 1516 aa9.52□□□□□ -0.89
MRE11-204ENST00000407439 EIF4G3O43432 1585 aaKnown RBP9.52□□□□□ -0.89
MRE11-204ENST00000407439 CCDC18Q5T9S5 1454 aa9.5□□□□□ -0.89
MRE11-204ENST00000407439 MAGI1Q96QZ7 1491 aaPredicted RBP9.5□□□□□ -0.89
MRE11-204ENST00000407439 KIAA0586Q9BVV6 1533 aa9.5□□□□□ -0.89
MRE11-204ENST00000407439 MTUS2Q5JR59 1369 aa9.49□□□□□ -0.89
MRE11-204ENST00000407439 GRIN2AQ12879 1464 aa9.49□□□□□ -0.89
MRE11-204ENST00000407439 EHBP1L1Q8N3D4 1523 aa9.49□□□□□ -0.89
MRE11-204ENST00000407439 ATP1B4Q9UN42 357 aaPredicted RBP9.49□□□□□ -0.89
MRE11-204ENST00000407439 LRRIQ1Q96JM4 1722 aa9.48□□□□□ -0.89
MRE11-204ENST00000407439 FGD6Q6ZV73 1430 aa9.48□□□□□ -0.89
MRE11-204ENST00000407439 HECW1Q76N89 1606 aa9.48□□□□□ -0.89
MRE11-204ENST00000407439 RAB3GAP2Q9H2M9 1393 aa9.47□□□□□ -0.89
MRE11-204ENST00000407439 ARHGEF11O15085 1522 aa9.46□□□□□ -0.89
MRE11-204ENST00000407439 SETD5Q9C0A6 1442 aa9.46□□□□□ -0.9
MRE11-204ENST00000407439 SYNJ2O15056 1496 aa9.46□□□□□ -0.9
MRE11-204ENST00000407439 NCOA2Q15596 1464 aa9.46□□□□□ -0.9
MRE11-204ENST00000407439 SUPT6HQ7KZ85 1726 aaKnown RBP9.45□□□□□ -0.9
MRE11-204ENST00000407439 ZNF316A6NFI3 1004 aaPredicted RBP9.45□□□□□ -0.9
MRE11-204ENST00000407439 MYOM3Q5VTT5 1437 aa9.45□□□□□ -0.9
MRE11-204ENST00000407439 EPRSP07814 1512 aaKnown RBP9.44□□□□□ -0.9
MRE11-204ENST00000407439 DISP1Q96F81 1524 aa9.44□□□□□ -0.9
MRE11-204ENST00000407439 KIAA0556O60303 1618 aa9.44□□□□□ -0.9
MRE11-204ENST00000407439 ITGAEP38570 1179 aa9.44□□□□□ -0.9
MRE11-204ENST00000407439 FAM50AQ14320 339 aaKnown RBP9.44□□□□□ -0.9
MRE11-204ENST00000407439 DIEXFQ68CQ4 756 aaKnown RBP9.43□□□□□ -0.9
MRE11-204ENST00000407439 MAGI3Q5TCQ9 1506 aa9.42□□□□□ -0.9
MRE11-204ENST00000407439 MAPKBP1O60336 1514 aa9.42□□□□□ -0.9
MRE11-204ENST00000407439 NUP160Q12769 1436 aa9.42□□□□□ -0.9
MRE11-204ENST00000407439 CEP170Q5SW79 1584 aa9.41□□□□□ -0.9
MRE11-204ENST00000407439 NCBP3Q53F19 620 aaKnown RBP9.4□□□□□ -0.9
MRE11-204ENST00000407439 PIAS4Q8N2W9 510 aaPredicted RBP9.4□□□□□ -0.9
MRE11-204ENST00000407439 HFM1A2PYH4 1435 aa9.4□□□□□ -0.9
MRE11-204ENST00000407439 TCOF1Q13428 1488 aaKnown RBP9.39□□□□□ -0.91
MRE11-204ENST00000407439 CHMP7Q8WUX9 453 aaPredicted RBP9.38□□□□□ -0.91
MRE11-204ENST00000407439 CDK13Q14004 1512 aaKnown RBP9.38□□□□□ -0.91
MRE11-204ENST00000407439 MIA2Q96PC5 1412 aa9.38□□□□□ -0.91
MRE11-204ENST00000407439 NUP153P49790 1475 aaKnown RBP9.38□□□□□ -0.91
MRE11-204ENST00000407439 PTPN23Q9H3S7 1636 aa9.38□□□□□ -0.91
MRE11-204ENST00000407439 RAPGEF6Q8TEU7 1601 aa9.37□□□□□ -0.91
MRE11-204ENST00000407439 PTPRKQ15262 1439 aa9.37□□□□□ -0.91
MRE11-204ENST00000407439 AKNAQ7Z591 1439 aa9.36□□□□□ -0.91
MRE11-204ENST00000407439 CARMIL2Q6F5E8 1435 aa9.35□□□□□ -0.91
MRE11-204ENST00000407439 NPM3O75607 178 aaKnown RBP9.35□□□□□ -0.91
MRE11-204ENST00000407439 NAIPQ13075 1403 aa9.35□□□□□ -0.91
MRE11-204ENST00000407439 UACAQ9BZF9 1416 aa9.34□□□□□ -0.91
MRE11-204ENST00000407439 TIMELESSQ9UNS1 1208 aa9.33□□□□□ -0.92
MRE11-204ENST00000407439 JPH4Q96JJ6 628 aa9.32□□□□□ -0.92
MRE11-204ENST00000407439 CDK11AQ9UQ88 783 aaPredicted RBP9.32□□□□□ -0.92
MRE11-204ENST00000407439 PLB1Q6P1J6 1458 aa9.31□□□□□ -0.92
MRE11-204ENST00000407439 TROQ12816 1431 aaPredicted RBP9.31□□□□□ -0.92
MRE11-204ENST00000407439 FBLN2P98095 1184 aa9.31□□□□□ -0.92
MRE11-204ENST00000407439 GCC2Q8IWJ2 1684 aa9.3□□□□□ -0.92
MRE11-204ENST00000407439 ZBTB22O15209 634 aa9.29□□□□□ -0.92
MRE11-204ENST00000407439 ADCY10Q96PN6 1610 aa9.29□□□□□ -0.92
MRE11-204ENST00000407439 ABCA8O94911 1581 aa9.29□□□□□ -0.92
MRE11-204ENST00000407439 ROCK1Q13464 1354 aa9.28□□□□□ -0.92
MRE11-204ENST00000407439 DNMT1P26358 1616 aaKnown RBP9.27□□□□□ -0.93
MRE11-204ENST00000407439 ARID3CA6NKF2 412 aa9.27□□□□□ -0.93
MRE11-204ENST00000407439 ACIN1Q9UKV3 1341 aaKnown RBP9.27□□□□□ -0.93
MRE11-204ENST00000407439 DAPK1P53355 1430 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms