RNA–Protein interactions for RNA: ENST00000407122.5

CLHC1-204, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLHC1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-204ENST00000407122 BIVM-ERCC5R4GMW8 1640 aa12.13□□□□□ -0.47
CLHC1-204ENST00000407122 POTEDQ86YR6 584 aa12.13□□□□□ -0.47
CLHC1-204ENST00000407122 TOP2BQ02880 1626 aa12.12□□□□□ -0.47
CLHC1-204ENST00000407122 FHAD1B1AJZ9 1412 aa12.11□□□□□ -0.47
CLHC1-204ENST00000407122 ERICH3Q5RHP9 1530 aa12.08□□□□□ -0.47
CLHC1-204ENST00000407122 SUPT5HO00267 1087 aaKnown RBP12.07□□□□□ -0.48
CLHC1-204ENST00000407122 PRG4Q92954 1404 aaPredicted RBP12.06□□□□□ -0.48
CLHC1-204ENST00000407122 PIAS4Q8N2W9 510 aaPredicted RBP12.05□□□□□ -0.48
CLHC1-204ENST00000407122 RUSC2Q8N2Y8 1516 aa12.03□□□□□ -0.48
CLHC1-204ENST00000407122 JPH4Q96JJ6 628 aa12.02□□□□□ -0.49
CLHC1-204ENST00000407122 ABCC10Q5T3U5 1492 aa12□□□□□ -0.49
CLHC1-204ENST00000407122 DIP2BQ9P265 1576 aa11.99□□□□□ -0.49
CLHC1-204ENST00000407122 ADCY10Q96PN6 1610 aa11.99□□□□□ -0.49
CLHC1-204ENST00000407122 MAPKBP1O60336 1514 aa11.98□□□□□ -0.49
CLHC1-204ENST00000407122 FAM69CQ0P6D2 419 aa11.98□□□□□ -0.49
CLHC1-204ENST00000407122 TSPOAP1O95153 1857 aa11.94□□□□□ -0.5
CLHC1-204ENST00000407122 NPM1P06748 294 aaKnown RBP eCLIP11.94□□□□□ -0.5
CLHC1-204ENST00000407122 KDM6BO15054 1643 aa11.93□□□□□ -0.5
CLHC1-204ENST00000407122 KIAA0586Q9BVV6 1533 aa11.9□□□□□ -0.5
CLHC1-204ENST00000407122 KDM4FA0A1W2PPD8 638 aa11.9□□□□□ -0.5
CLHC1-204ENST00000407122 CUL7Q14999 1698 aa11.88□□□□□ -0.51
CLHC1-204ENST00000407122 IGF1RP08069 1367 aa11.87□□□□□ -0.51
CLHC1-204ENST00000407122 KIF27Q86VH2 1401 aa11.84□□□□□ -0.51
CLHC1-204ENST00000407122 PPRC1Q5VV67 1664 aaKnown RBP11.83□□□□□ -0.52
CLHC1-204ENST00000407122 PTPRGP23470 1445 aa11.83□□□□□ -0.52
CLHC1-204ENST00000407122 TTBK1Q5TCY1 1321 aaPredicted RBP11.82□□□□□ -0.52
CLHC1-204ENST00000407122 ABCC2Q92887 1545 aa11.81□□□□□ -0.52
CLHC1-204ENST00000407122 ASXL2Q76L83 1435 aa11.79□□□□□ -0.52
CLHC1-204ENST00000407122 TNIKQ9UKE5 1360 aa11.79□□□□□ -0.52
CLHC1-204ENST00000407122 GLI2P10070 1586 aa11.79□□□□□ -0.52
CLHC1-204ENST00000407122 CARMIL1Q5VZK9 1371 aa11.78□□□□□ -0.52
CLHC1-204ENST00000407122 IQGAP2Q13576 1575 aa11.78□□□□□ -0.52
CLHC1-204ENST00000407122 CARMIL2Q6F5E8 1435 aa11.78□□□□□ -0.52
CLHC1-204ENST00000407122 PLB1Q6P1J6 1458 aa11.77□□□□□ -0.53
CLHC1-204ENST00000407122 UHRF1BP1LA0JNW5 1464 aa11.76□□□□□ -0.53
CLHC1-204ENST00000407122 ADGRL1O94910 1474 aa11.76□□□□□ -0.53
CLHC1-204ENST00000407122 DISP1Q96F81 1524 aa11.75□□□□□ -0.53
CLHC1-204ENST00000407122 ILDR1Q86SU0 546 aaPredicted RBP11.75□□□□□ -0.53
CLHC1-204ENST00000407122 COL17A1Q9UMD9 1497 aaPredicted RBP11.75□□□□□ -0.53
CLHC1-204ENST00000407122 MAP3K4Q9Y6R4 1608 aa11.74□□□□□ -0.53
CLHC1-204ENST00000407122 UACAQ9BZF9 1416 aa11.74□□□□□ -0.53
CLHC1-204ENST00000407122 EPRSP07814 1512 aaKnown RBP11.73□□□□□ -0.53
CLHC1-204ENST00000407122 ZCCHC11Q5TAX3 1644 aaKnown RBP11.72□□□□□ -0.53
CLHC1-204ENST00000407122 KDM5BQ9UGL1 1544 aa11.72□□□□□ -0.53
CLHC1-204ENST00000407122 KIAA0556O60303 1618 aa11.69□□□□□ -0.54
CLHC1-204ENST00000407122 UGGT2Q9NYU1 1516 aa11.69□□□□□ -0.54
CLHC1-204ENST00000407122 HECW2Q9P2P5 1572 aa11.68□□□□□ -0.54
CLHC1-204ENST00000407122 TEX14Q8IWB6 1497 aa11.67□□□□□ -0.54
CLHC1-204ENST00000407122 MSH5O43196 834 aa11.66□□□□□ -0.54
CLHC1-204ENST00000407122 RAPGEF2Q9Y4G8 1499 aa11.66□□□□□ -0.54
CLHC1-204ENST00000407122 WDR7Q9Y4E6 1490 aa11.64□□□□□ -0.55
CLHC1-204ENST00000407122 CTTNBP2Q8WZ74 1663 aa11.63□□□□□ -0.55
CLHC1-204ENST00000407122 CFAP43Q8NDM7 1665 aa11.61□□□□□ -0.55
CLHC1-204ENST00000407122 MAGI3Q5TCQ9 1506 aa11.59□□□□□ -0.55
CLHC1-204ENST00000407122 ABCA8O94911 1581 aa11.59□□□□□ -0.55
CLHC1-204ENST00000407122 KIF21BO75037 1637 aa11.59□□□□□ -0.55
CLHC1-204ENST00000407122 CD109Q6YHK3 1445 aa11.59□□□□□ -0.55
CLHC1-204ENST00000407122 KCNH8Q96L42 1107 aa11.57□□□□□ -0.56
CLHC1-204ENST00000407122 GOLGA3Q08378 1498 aa11.55□□□□□ -0.56
CLHC1-204ENST00000407122 ARAP3Q8WWN8 1544 aa11.51□□□□□ -0.57
CLHC1-204ENST00000407122 ARID3CA6NKF2 412 aa11.5□□□□□ -0.57
CLHC1-204ENST00000407122 PRXQ9BXM0 1461 aa11.49□□□□□ -0.57
CLHC1-204ENST00000407122 ABCA9Q8IUA7 1624 aa11.48□□□□□ -0.57
CLHC1-204ENST00000407122 ADAMTSL3P82987 1691 aa11.48□□□□□ -0.57
CLHC1-204ENST00000407122 ATP10BO94823 1461 aa11.48□□□□□ -0.57
CLHC1-204ENST00000407122 PTPRMP28827 1452 aa11.46□□□□□ -0.57
CLHC1-204ENST00000407122 P3H3Q8IVL6 736 aa11.46□□□□□ -0.57
CLHC1-204ENST00000407122 FRMPD1Q5SYB0 1578 aa11.44□□□□□ -0.58
CLHC1-204ENST00000407122 BCORL1Q5H9F3 1711 aa11.44□□□□□ -0.58
CLHC1-204ENST00000407122 RAPGEF3O95398 923 aa11.44□□□□□ -0.58
CLHC1-204ENST00000407122 FBXO41Q8TF61 875 aa11.44□□□□□ -0.58
CLHC1-204ENST00000407122 MADDQ8WXG6 1647 aa11.44□□□□□ -0.58
CLHC1-204ENST00000407122 SAMD9Q5K651 1589 aa11.43□□□□□ -0.58
CLHC1-204ENST00000407122 RAPGEF6Q8TEU7 1601 aa11.43□□□□□ -0.58
CLHC1-204ENST00000407122 PPP4R3CPQ6ZMV5 832 aa11.42□□□□□ -0.58
CLHC1-204ENST00000407122 PHLDB1Q86UU1 1377 aa11.42□□□□□ -0.58
CLHC1-204ENST00000407122 NEO1Q92859 1461 aa11.42□□□□□ -0.58
CLHC1-204ENST00000407122 PCF11O94913 1555 aaKnown RBP11.4□□□□□ -0.58
CLHC1-204ENST00000407122 LMTK3Q96Q04 1460 aa11.39□□□□□ -0.59
CLHC1-204ENST00000407122 RIMS1Q86UR5 1692 aaKnown RBP11.39□□□□□ -0.59
CLHC1-204ENST00000407122 FAM9AQ8IZU1 332 aaPredicted RBP11.38□□□□□ -0.59
CLHC1-204ENST00000407122 RICTORQ6R327 1708 aa11.38□□□□□ -0.59
CLHC1-204ENST00000407122 NUP153P49790 1475 aaKnown RBP11.38□□□□□ -0.59
CLHC1-204ENST00000407122 ARHGEF40Q8TER5 1519 aa11.38□□□□□ -0.59
CLHC1-204ENST00000407122 ARID4BQ4LE39 1312 aaPredicted RBP11.37□□□□□ -0.59
CLHC1-204ENST00000407122 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.37□□□□□ -0.59
CLHC1-204ENST00000407122 HNRNPUL2Q1KMD3 747 aaKnown RBP11.37□□□□□ -0.59
CLHC1-204ENST00000407122 SIGLEC1Q9BZZ2 1709 aa11.35□□□□□ -0.59
CLHC1-204ENST00000407122 FHOD3Q2V2M9 1422 aa11.34□□□□□ -0.59
CLHC1-204ENST00000407122 DENND4BO75064 1496 aaPredicted RBP11.34□□□□□ -0.59
CLHC1-204ENST00000407122 CSRNP3Q8WYN3 585 aa11.33□□□□□ -0.6
CLHC1-204ENST00000407122 RANGAP1P46060 587 aaPredicted RBP11.32□□□□□ -0.6
CLHC1-204ENST00000407122 TTC37Q6PGP7 1564 aa11.32□□□□□ -0.6
CLHC1-204ENST00000407122 AKNAQ7Z591 1439 aa11.32□□□□□ -0.6
CLHC1-204ENST00000407122 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.32□□□□□ -0.6
CLHC1-204ENST00000407122 CFAP74Q9C0B2 1584 aa11.32□□□□□ -0.6
CLHC1-204ENST00000407122 FANCAO15360 1455 aa11.32□□□□□ -0.6
CLHC1-204ENST00000407122 HSPA2P54652 639 aa11.32□□□□□ -0.6
CLHC1-204ENST00000407122 ZMYM4Q5VZL5 1548 aa11.31□□□□□ -0.6
CLHC1-204ENST00000407122 YEATS2Q9ULM3 1422 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms