RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 WRNQ14191 1432 aaPredicted RBP eCLIP14.12□□□□□ -0.15
GPC3-203ENST00000406757 CACNB1Q02641 598 aaPredicted RBP14.1□□□□□ -0.15
GPC3-203ENST00000406757 GRIN2AQ12879 1464 aa14.07□□□□□ -0.16
GPC3-203ENST00000406757 ERCC6L2Q5T890 1561 aa14.05□□□□□ -0.16
GPC3-203ENST00000406757 HOXD11P31277 338 aaPredicted RBP14.04□□□□□ -0.16
GPC3-203ENST00000406757 ADAMTS12P58397 1594 aa14.04□□□□□ -0.16
GPC3-203ENST00000406757 CEP170Q5SW79 1584 aa14.03□□□□□ -0.16
GPC3-203ENST00000406757 TOP2BQ02880 1626 aa14.03□□□□□ -0.16
GPC3-203ENST00000406757 BIVM-ERCC5R4GMW8 1640 aa14.02□□□□□ -0.16
GPC3-203ENST00000406757 DCAF8L1A6NGE4 600 aa14.02□□□□□ -0.17
GPC3-203ENST00000406757 NUP160Q12769 1436 aa14.01□□□□□ -0.17
GPC3-203ENST00000406757 FHAD1B1AJZ9 1412 aa13.99□□□□□ -0.17
GPC3-203ENST00000406757 ERICH3Q5RHP9 1530 aa13.96□□□□□ -0.17
GPC3-203ENST00000406757 SHROOM2Q13796 1616 aa13.95□□□□□ -0.18
GPC3-203ENST00000406757 FAM9AQ8IZU1 332 aaPredicted RBP13.94□□□□□ -0.18
GPC3-203ENST00000406757 CNKSR2Q8WXI2 1034 aa13.92□□□□□ -0.18
GPC3-203ENST00000406757 PRG4Q92954 1404 aaPredicted RBP13.91□□□□□ -0.18
GPC3-203ENST00000406757 JPH4Q96JJ6 628 aa13.89□□□□□ -0.19
GPC3-203ENST00000406757 RUSC2Q8N2Y8 1516 aa13.89□□□□□ -0.19
GPC3-203ENST00000406757 RNF39Q9H2S5 420 aa13.88□□□□□ -0.19
GPC3-203ENST00000406757 RNF216Q9NWF9 866 aaPredicted RBP13.86□□□□□ -0.19
GPC3-203ENST00000406757 KIF13AQ9H1H9 1805 aa13.82□□□□□ -0.2
GPC3-203ENST00000406757 EHMT2Q96KQ7 1210 aa13.81□□□□□ -0.2
GPC3-203ENST00000406757 NPM1P06748 294 aaKnown RBP eCLIP13.79□□□□□ -0.2
GPC3-203ENST00000406757 IGF1RP08069 1367 aa13.79□□□□□ -0.2
GPC3-203ENST00000406757 FAM69CQ0P6D2 419 aa13.78□□□□□ -0.2
GPC3-203ENST00000406757 KIF27Q86VH2 1401 aa13.78□□□□□ -0.2
GPC3-203ENST00000406757 ABCC10Q5T3U5 1492 aa13.76□□□□□ -0.21
GPC3-203ENST00000406757 ADCY10Q96PN6 1610 aa13.75□□□□□ -0.21
GPC3-203ENST00000406757 KIAA0586Q9BVV6 1533 aa13.75□□□□□ -0.21
GPC3-203ENST00000406757 CSRNP3Q8WYN3 585 aa13.75□□□□□ -0.21
GPC3-203ENST00000406757 MAPKBP1O60336 1514 aa13.74□□□□□ -0.21
GPC3-203ENST00000406757 CUL7Q14999 1698 aa13.73□□□□□ -0.21
GPC3-203ENST00000406757 DIP2BQ9P265 1576 aa13.72□□□□□ -0.21
GPC3-203ENST00000406757 TTBK1Q5TCY1 1321 aaPredicted RBP13.71□□□□□ -0.21
GPC3-203ENST00000406757 LOC105371045A0A1W2PR82 267 aa13.7□□□□□ -0.22
GPC3-203ENST00000406757 EEA1Q15075 1411 aa13.69□□□□□ -0.22
GPC3-203ENST00000406757 CARMIL1Q5VZK9 1371 aa13.69□□□□□ -0.22
GPC3-203ENST00000406757 PTPRGP23470 1445 aa13.67□□□□□ -0.22
GPC3-203ENST00000406757 C1QBPQ07021 282 aaKnown RBP13.67□□□□□ -0.22
GPC3-203ENST00000406757 KDM6BO15054 1643 aa13.64□□□□□ -0.23
GPC3-203ENST00000406757 CARMIL2Q6F5E8 1435 aa13.64□□□□□ -0.23
GPC3-203ENST00000406757 TSPOAP1O95153 1857 aa13.63□□□□□ -0.23
GPC3-203ENST00000406757 TNIKQ9UKE5 1360 aa13.63□□□□□ -0.23
GPC3-203ENST00000406757 IQGAP2Q13576 1575 aa13.62□□□□□ -0.23
GPC3-203ENST00000406757 ABCC2Q92887 1545 aa13.6□□□□□ -0.23
GPC3-203ENST00000406757 PRXQ9BXM0 1461 aa13.6□□□□□ -0.23
GPC3-203ENST00000406757 RAPGEF2Q9Y4G8 1499 aa13.6□□□□□ -0.23
GPC3-203ENST00000406757 ASXL2Q76L83 1435 aa13.58□□□□□ -0.24
GPC3-203ENST00000406757 KDM4FA0A1W2PPD8 638 aa13.58□□□□□ -0.24
GPC3-203ENST00000406757 UBTFP17480 764 aaKnown RBP13.58□□□□□ -0.24
GPC3-203ENST00000406757 DISP1Q96F81 1524 aa13.57□□□□□ -0.24
GPC3-203ENST00000406757 UACAQ9BZF9 1416 aa13.56□□□□□ -0.24
GPC3-203ENST00000406757 PLB1Q6P1J6 1458 aa13.55□□□□□ -0.24
GPC3-203ENST00000406757 KIF21BO75037 1637 aa13.55□□□□□ -0.24
GPC3-203ENST00000406757 RANGAP1P46060 587 aaPredicted RBP13.55□□□□□ -0.24
GPC3-203ENST00000406757 UHRF1BP1LA0JNW5 1464 aa13.55□□□□□ -0.24
GPC3-203ENST00000406757 GOLGA3Q08378 1498 aa13.54□□□□□ -0.24
GPC3-203ENST00000406757 GLI2P10070 1586 aa13.53□□□□□ -0.24
GPC3-203ENST00000406757 UGGT2Q9NYU1 1516 aa13.52□□□□□ -0.25
GPC3-203ENST00000406757 PPRC1Q5VV67 1664 aaKnown RBP13.52□□□□□ -0.25
GPC3-203ENST00000406757 KDM5BQ9UGL1 1544 aa13.5□□□□□ -0.25
GPC3-203ENST00000406757 KIAA0556O60303 1618 aa13.5□□□□□ -0.25
GPC3-203ENST00000406757 EPRSP07814 1512 aaKnown RBP13.49□□□□□ -0.25
GPC3-203ENST00000406757 NCBP3Q53F19 620 aaKnown RBP13.49□□□□□ -0.25
GPC3-203ENST00000406757 ZCCHC11Q5TAX3 1644 aaKnown RBP13.48□□□□□ -0.25
GPC3-203ENST00000406757 COL17A1Q9UMD9 1497 aaPredicted RBP13.47□□□□□ -0.25
GPC3-203ENST00000406757 MAP3K4Q9Y6R4 1608 aa13.46□□□□□ -0.26
GPC3-203ENST00000406757 ADGRL1O94910 1474 aa13.43□□□□□ -0.26
GPC3-203ENST00000406757 TEX14Q8IWB6 1497 aa13.42□□□□□ -0.26
GPC3-203ENST00000406757 WDR7Q9Y4E6 1490 aa13.42□□□□□ -0.26
GPC3-203ENST00000406757 CTTNBP2Q8WZ74 1663 aa13.42□□□□□ -0.26
GPC3-203ENST00000406757 P3H3Q8IVL6 736 aa13.41□□□□□ -0.26
GPC3-203ENST00000406757 KCNH8Q96L42 1107 aa13.39□□□□□ -0.27
GPC3-203ENST00000406757 ABCA8O94911 1581 aa13.37□□□□□ -0.27
GPC3-203ENST00000406757 CEP162Q5TB80 1403 aa13.36□□□□□ -0.27
GPC3-203ENST00000406757 CD109Q6YHK3 1445 aa13.36□□□□□ -0.27
GPC3-203ENST00000406757 ARID3CA6NKF2 412 aa13.35□□□□□ -0.27
GPC3-203ENST00000406757 MAGI3Q5TCQ9 1506 aa13.34□□□□□ -0.27
GPC3-203ENST00000406757 CLIP1P30622 1438 aa13.33□□□□□ -0.28
GPC3-203ENST00000406757 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.33□□□□□ -0.28
GPC3-203ENST00000406757 CFAP43Q8NDM7 1665 aa13.33□□□□□ -0.28
GPC3-203ENST00000406757 NPM3O75607 178 aaKnown RBP13.31□□□□□ -0.28
GPC3-203ENST00000406757 ARHGAP35Q9NRY4 1499 aa13.29□□□□□ -0.28
GPC3-203ENST00000406757 ILDR1Q86SU0 546 aaPredicted RBP13.29□□□□□ -0.28
GPC3-203ENST00000406757 HECW2Q9P2P5 1572 aa13.28□□□□□ -0.28
GPC3-203ENST00000406757 FHOD3Q2V2M9 1422 aa13.28□□□□□ -0.28
GPC3-203ENST00000406757 ATP10BO94823 1461 aa13.28□□□□□ -0.28
GPC3-203ENST00000406757 SAMD9Q5K651 1589 aa13.24□□□□□ -0.29
GPC3-203ENST00000406757 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.23□□□□□ -0.29
GPC3-203ENST00000406757 HNRNPUL2Q1KMD3 747 aaKnown RBP13.23□□□□□ -0.29
GPC3-203ENST00000406757 ARAP3Q8WWN8 1544 aa13.23□□□□□ -0.29
GPC3-203ENST00000406757 ATP1B4Q9UN42 357 aaPredicted RBP13.22□□□□□ -0.29
GPC3-203ENST00000406757 EFCAB5A4FU69 1503 aa13.22□□□□□ -0.29
GPC3-203ENST00000406757 ABCA9Q8IUA7 1624 aa13.21□□□□□ -0.29
GPC3-203ENST00000406757 RAPGEF6Q8TEU7 1601 aa13.21□□□□□ -0.29
GPC3-203ENST00000406757 RAPGEF3O95398 923 aa13.2□□□□□ -0.3
GPC3-203ENST00000406757 PHLDB1Q86UU1 1377 aa13.18□□□□□ -0.3
GPC3-203ENST00000406757 NUP153P49790 1475 aaKnown RBP13.17□□□□□ -0.3
GPC3-203ENST00000406757 NEO1Q92859 1461 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms