RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 FAM69CQ0P6D2 419 aa18.22■□□□□ 0.51
RPAIN-204ENST00000405578 ILDR1Q86SU0 546 aaPredicted RBP18.22■□□□□ 0.51
RPAIN-204ENST00000405578 MAPKBP1O60336 1514 aa18.22■□□□□ 0.51
RPAIN-204ENST00000405578 WRNQ14191 1432 aaPredicted RBP eCLIP18.21■□□□□ 0.51
RPAIN-204ENST00000405578 BIVM-ERCC5R4GMW8 1640 aa18.2■□□□□ 0.5
RPAIN-204ENST00000405578 KDM4FA0A1W2PPD8 638 aa18.2■□□□□ 0.5
RPAIN-204ENST00000405578 ERICH3Q5RHP9 1530 aa18.19■□□□□ 0.5
RPAIN-204ENST00000405578 ADCY10Q96PN6 1610 aa18.18■□□□□ 0.5
RPAIN-204ENST00000405578 RUSC2Q8N2Y8 1516 aa18.18■□□□□ 0.5
RPAIN-204ENST00000405578 TOP2BQ02880 1626 aa18.16■□□□□ 0.5
RPAIN-204ENST00000405578 JPH4Q96JJ6 628 aa18.13■□□□□ 0.49
RPAIN-204ENST00000405578 NPM1P06748 294 aaKnown RBP eCLIP18.12■□□□□ 0.49
RPAIN-204ENST00000405578 PPRC1Q5VV67 1664 aaKnown RBP18■□□□□ 0.47
RPAIN-204ENST00000405578 ADGRL1O94910 1474 aa18■□□□□ 0.47
RPAIN-204ENST00000405578 HECW2Q9P2P5 1572 aa17.96■□□□□ 0.47
RPAIN-204ENST00000405578 KIAA0586Q9BVV6 1533 aa17.93■□□□□ 0.46
RPAIN-204ENST00000405578 CUL7Q14999 1698 aa17.92■□□□□ 0.46
RPAIN-204ENST00000405578 GLI2P10070 1586 aa17.9■□□□□ 0.46
RPAIN-204ENST00000405578 ABCC2Q92887 1545 aa17.87■□□□□ 0.45
RPAIN-204ENST00000405578 ASXL2Q76L83 1435 aa17.86■□□□□ 0.45
RPAIN-204ENST00000405578 PTPRGP23470 1445 aa17.85■□□□□ 0.45
RPAIN-204ENST00000405578 TTBK1Q5TCY1 1321 aaPredicted RBP17.85■□□□□ 0.45
RPAIN-204ENST00000405578 PLB1Q6P1J6 1458 aa17.84■□□□□ 0.45
RPAIN-204ENST00000405578 MAP3K4Q9Y6R4 1608 aa17.83■□□□□ 0.44
RPAIN-204ENST00000405578 COL17A1Q9UMD9 1497 aaPredicted RBP17.82■□□□□ 0.44
RPAIN-204ENST00000405578 TNIKQ9UKE5 1360 aa17.78■□□□□ 0.44
RPAIN-204ENST00000405578 IGF1RP08069 1367 aa17.77■□□□□ 0.43
RPAIN-204ENST00000405578 UHRF1BP1LA0JNW5 1464 aa17.76■□□□□ 0.43
RPAIN-204ENST00000405578 CARMIL2Q6F5E8 1435 aa17.76■□□□□ 0.43
RPAIN-204ENST00000405578 EPRSP07814 1512 aaKnown RBP17.76■□□□□ 0.43
RPAIN-204ENST00000405578 TEX14Q8IWB6 1497 aa17.75■□□□□ 0.43
RPAIN-204ENST00000405578 ZCCHC11Q5TAX3 1644 aaKnown RBP17.75■□□□□ 0.43
RPAIN-204ENST00000405578 IQGAP2Q13576 1575 aa17.74■□□□□ 0.43
RPAIN-204ENST00000405578 KIF27Q86VH2 1401 aa17.73■□□□□ 0.43
RPAIN-204ENST00000405578 UACAQ9BZF9 1416 aa17.72■□□□□ 0.43
RPAIN-204ENST00000405578 KDM5BQ9UGL1 1544 aa17.7■□□□□ 0.42
RPAIN-204ENST00000405578 DISP1Q96F81 1524 aa17.67■□□□□ 0.42
RPAIN-204ENST00000405578 KIF21BO75037 1637 aa17.66■□□□□ 0.42
RPAIN-204ENST00000405578 CARMIL1Q5VZK9 1371 aa17.66■□□□□ 0.42
RPAIN-204ENST00000405578 FBXO41Q8TF61 875 aa17.64■□□□□ 0.41
RPAIN-204ENST00000405578 CFAP43Q8NDM7 1665 aa17.62■□□□□ 0.41
RPAIN-204ENST00000405578 WDR7Q9Y4E6 1490 aa17.61■□□□□ 0.41
RPAIN-204ENST00000405578 KIAA0556O60303 1618 aa17.6■□□□□ 0.41
RPAIN-204ENST00000405578 UGGT2Q9NYU1 1516 aa17.58■□□□□ 0.41
RPAIN-204ENST00000405578 MAGI3Q5TCQ9 1506 aa17.55■□□□□ 0.4
RPAIN-204ENST00000405578 CD109Q6YHK3 1445 aa17.54■□□□□ 0.4
RPAIN-204ENST00000405578 ADAMTSL3P82987 1691 aa17.51■□□□□ 0.39
RPAIN-204ENST00000405578 CTTNBP2Q8WZ74 1663 aa17.49■□□□□ 0.39
RPAIN-204ENST00000405578 PTPRMP28827 1452 aa17.47■□□□□ 0.39
RPAIN-204ENST00000405578 KCNH8Q96L42 1107 aa17.46■□□□□ 0.39
RPAIN-204ENST00000405578 ABCA8O94911 1581 aa17.45■□□□□ 0.38
RPAIN-204ENST00000405578 RAPGEF2Q9Y4G8 1499 aa17.45■□□□□ 0.38
RPAIN-204ENST00000405578 EEA1Q15075 1411 aa17.45■□□□□ 0.38
RPAIN-204ENST00000405578 PCF11O94913 1555 aaKnown RBP17.44■□□□□ 0.38
RPAIN-204ENST00000405578 ARAP3Q8WWN8 1544 aa17.43■□□□□ 0.38
RPAIN-204ENST00000405578 BCORL1Q5H9F3 1711 aa17.43■□□□□ 0.38
RPAIN-204ENST00000405578 MADDQ8WXG6 1647 aa17.42■□□□□ 0.38
RPAIN-204ENST00000405578 CSRNP3Q8WYN3 585 aa17.39■□□□□ 0.37
RPAIN-204ENST00000405578 LMTK3Q96Q04 1460 aa17.38■□□□□ 0.37
RPAIN-204ENST00000405578 FAM9AQ8IZU1 332 aaPredicted RBP17.38■□□□□ 0.37
RPAIN-204ENST00000405578 GOLGA3Q08378 1498 aa17.37■□□□□ 0.37
RPAIN-204ENST00000405578 RIMS1Q86UR5 1692 aaKnown RBP17.36■□□□□ 0.37
RPAIN-204ENST00000405578 ABCA9Q8IUA7 1624 aa17.36■□□□□ 0.37
RPAIN-204ENST00000405578 FRMPD1Q5SYB0 1578 aa17.34■□□□□ 0.37
RPAIN-204ENST00000405578 ARID3CA6NKF2 412 aa17.29■□□□□ 0.36
RPAIN-204ENST00000405578 RAPGEF3O95398 923 aa17.29■□□□□ 0.36
RPAIN-204ENST00000405578 PHLDB1Q86UU1 1377 aa17.28■□□□□ 0.36
RPAIN-204ENST00000405578 ARHGEF40Q8TER5 1519 aa17.28■□□□□ 0.36
RPAIN-204ENST00000405578 ARID4BQ4LE39 1312 aaPredicted RBP17.27■□□□□ 0.36
RPAIN-204ENST00000405578 ATP10BO94823 1461 aa17.26■□□□□ 0.35
RPAIN-204ENST00000405578 NEO1Q92859 1461 aa17.26■□□□□ 0.35
RPAIN-204ENST00000405578 PRXQ9BXM0 1461 aa17.26■□□□□ 0.35
RPAIN-204ENST00000405578 HSPA2P54652 639 aa17.24■□□□□ 0.35
RPAIN-204ENST00000405578 RICTORQ6R327 1708 aa17.24■□□□□ 0.35
RPAIN-204ENST00000405578 PLPPR3Q6T4P5 718 aa17.2■□□□□ 0.34
RPAIN-204ENST00000405578 CERKQ8TCT0 537 aa17.2■□□□□ 0.34
RPAIN-204ENST00000405578 SIGLEC1Q9BZZ2 1709 aa17.2■□□□□ 0.34
RPAIN-204ENST00000405578 FER1L4A9Z1Z3 1794 aa17.2■□□□□ 0.34
RPAIN-204ENST00000405578 RAPGEF6Q8TEU7 1601 aa17.19■□□□□ 0.34
RPAIN-204ENST00000405578 DISP3Q9P2K9 1392 aa17.18■□□□□ 0.34
RPAIN-204ENST00000405578 ILDR2Q71H61 639 aa17.18■□□□□ 0.34
RPAIN-204ENST00000405578 SOCS7O14512 581 aa17.15■□□□□ 0.34
RPAIN-204ENST00000405578 P3H3Q8IVL6 736 aa17.15■□□□□ 0.34
RPAIN-204ENST00000405578 FANCAO15360 1455 aa17.15■□□□□ 0.34
RPAIN-204ENST00000405578 CFAP74Q9C0B2 1584 aa17.15■□□□□ 0.34
RPAIN-204ENST00000405578 DENND4BO75064 1496 aaPredicted RBP17.14■□□□□ 0.33
RPAIN-204ENST00000405578 UBTFP17480 764 aaKnown RBP17.14■□□□□ 0.33
RPAIN-204ENST00000405578 SAMD9Q5K651 1589 aa17.13■□□□□ 0.33
RPAIN-204ENST00000405578 TTC37Q6PGP7 1564 aa17.13■□□□□ 0.33
RPAIN-204ENST00000405578 PREX1Q8TCU6 1659 aa17.13■□□□□ 0.33
RPAIN-204ENST00000405578 POGZQ7Z3K3 1410 aa17.13■□□□□ 0.33
RPAIN-204ENST00000405578 ZMYM4Q5VZL5 1548 aa17.12■□□□□ 0.33
RPAIN-204ENST00000405578 SPATA31D1Q6ZQQ2 1576 aa17.12■□□□□ 0.33
RPAIN-204ENST00000405578 EHMT2Q96KQ7 1210 aa17.12■□□□□ 0.33
RPAIN-204ENST00000405578 ZFYVE16Q7Z3T8 1539 aa17.11■□□□□ 0.33
RPAIN-204ENST00000405578 AKNAQ7Z591 1439 aa17.11■□□□□ 0.33
RPAIN-204ENST00000405578 EFCAB5A4FU69 1503 aa17.11■□□□□ 0.33
RPAIN-204ENST00000405578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.09■□□□□ 0.33
RPAIN-204ENST00000405578 HNRNPUL2Q1KMD3 747 aaKnown RBP17.09■□□□□ 0.33
RPAIN-204ENST00000405578 FHOD3Q2V2M9 1422 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms