RNA–Protein interactions for RNA: ENST00000402845.7

CACNA1C-221, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-221ENST00000402845 SALL2Q9Y467 1007 aaPredicted RBP14.71□□□□□ -0.05
CACNA1C-221ENST00000402845 CCDC9Q9Y3X0 531 aaKnown RBP14.71□□□□□ -0.05
CACNA1C-221ENST00000402845 FKBP8Q14318 412 aa14.7□□□□□ -0.06
CACNA1C-221ENST00000402845 KDM2AQ9Y2K7 1162 aa14.7□□□□□ -0.06
CACNA1C-221ENST00000402845 MLECQ14165 292 aa14.69□□□□□ -0.06
CACNA1C-221ENST00000402845 CLSTN1O94985 981 aa14.69□□□□□ -0.06
CACNA1C-221ENST00000402845 WDR43Q15061 677 aaKnown RBP eCLIP14.69□□□□□ -0.06
CACNA1C-221ENST00000402845 MYH16Q9H6N6 1097 aa14.68□□□□□ -0.06
CACNA1C-221ENST00000402845 FAM9BQ8IZU0 186 aa14.68□□□□□ -0.06
CACNA1C-221ENST00000402845 PRM3Q9NNZ6 103 aa14.67□□□□□ -0.06
CACNA1C-221ENST00000402845 PHF23Q9BUL5 403 aaPredicted RBP14.66□□□□□ -0.06
CACNA1C-221ENST00000402845 TSPY4P0CV99 314 aa14.66□□□□□ -0.06
CACNA1C-221ENST00000402845 TSPY10P0CW01 314 aa14.66□□□□□ -0.06
CACNA1C-221ENST00000402845 HNRNPUQ00839 825 aaKnown RBP eCLIP14.66□□□□□ -0.06
CACNA1C-221ENST00000402845 CHIC2Q9UKJ5 165 aa14.65□□□□□ -0.06
CACNA1C-221ENST00000402845 ISY1Q9ULR0 285 aaKnown RBP14.64□□□□□ -0.07
CACNA1C-221ENST00000402845 GOLGA2Q08379 1002 aa14.64□□□□□ -0.07
CACNA1C-221ENST00000402845 PPM1GO15355 546 aaPredicted RBP14.64□□□□□ -0.07
CACNA1C-221ENST00000402845 TMC1Q8TDI8 760 aa14.63□□□□□ -0.07
CACNA1C-221ENST00000402845 FBXO3Q9UK99 471 aa14.62□□□□□ -0.07
CACNA1C-221ENST00000402845 DCAF8L1A6NGE4 600 aa14.6□□□□□ -0.07
CACNA1C-221ENST00000402845 ERCC6Q03468 1493 aa14.6□□□□□ -0.07
CACNA1C-221ENST00000402845 CCDC136Q96JN2 1154 aa14.6□□□□□ -0.07
CACNA1C-221ENST00000402845 NCLP19338 710 aaKnown RBP14.58□□□□□ -0.07
CACNA1C-221ENST00000402845 TMX4Q9H1E5 349 aaPredicted RBP14.58□□□□□ -0.07
CACNA1C-221ENST00000402845 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.58□□□□□ -0.07
CACNA1C-221ENST00000402845 KRI1Q8N9T8 703 aaKnown RBP14.58□□□□□ -0.08
CACNA1C-221ENST00000402845 CSRNP3Q8WYN3 585 aa14.57□□□□□ -0.08
CACNA1C-221ENST00000402845 ANO8Q9HCE9 1232 aaPredicted RBP14.56□□□□□ -0.08
CACNA1C-221ENST00000402845 DDX10Q13206 875 aaKnown RBP14.52□□□□□ -0.08
CACNA1C-221ENST00000402845 POGKQ9P215 609 aa14.5□□□□□ -0.09
CACNA1C-221ENST00000402845 PDE4CQ08493 712 aa14.5□□□□□ -0.09
CACNA1C-221ENST00000402845 SOX12O15370 315 aa14.49□□□□□ -0.09
CACNA1C-221ENST00000402845 BECN1Q14457 450 aa14.49□□□□□ -0.09
CACNA1C-221ENST00000402845 MEX3CQ5U5Q3 659 aaKnown RBP14.48□□□□□ -0.09
CACNA1C-221ENST00000402845 ZRSR1Q15695 479 aaKnown RBP14.48□□□□□ -0.09
CACNA1C-221ENST00000402845 LAS1LQ9Y4W2 734 aaKnown RBP14.47□□□□□ -0.09
CACNA1C-221ENST00000402845 DDRGK1Q96HY6 314 aa14.47□□□□□ -0.09
CACNA1C-221ENST00000402845 G3V3G9 751 aa14.47□□□□□ -0.09
CACNA1C-221ENST00000402845 DCAF8Q5TAQ9 597 aa14.47□□□□□ -0.09
CACNA1C-221ENST00000402845 TRIM44Q96DX7 344 aaPredicted RBP14.46□□□□□ -0.09
CACNA1C-221ENST00000402845 GOLGA6L22H0YM25 854 aa14.46□□□□□ -0.1
CACNA1C-221ENST00000402845 MRS2Q9HD23 443 aa14.45□□□□□ -0.1
CACNA1C-221ENST00000402845 CASC1Q6TDU7 716 aa14.45□□□□□ -0.1
CACNA1C-221ENST00000402845 KLHL34Q8N239 644 aa14.45□□□□□ -0.1
CACNA1C-221ENST00000402845 EIF4G2P78344 907 aaKnown RBP eCLIP14.44□□□□□ -0.1
CACNA1C-221ENST00000402845 EEA1Q15075 1411 aa14.44□□□□□ -0.1
CACNA1C-221ENST00000402845 PLEKHD1A6NEE1 506 aa14.44□□□□□ -0.1
CACNA1C-221ENST00000402845 ZNF330Q9Y3S2 320 aaPredicted RBP14.43□□□□□ -0.1
CACNA1C-221ENST00000402845 CSB-PGBD3P0DP91 1061 aa14.43□□□□□ -0.1
CACNA1C-221ENST00000402845 RGL3Q3MIN7 710 aa14.43□□□□□ -0.1
CACNA1C-221ENST00000402845 MSH5O43196 834 aa14.42□□□□□ -0.1
CACNA1C-221ENST00000402845 ANP32EQ9BTT0 268 aa14.41□□□□□ -0.1
CACNA1C-221ENST00000402845 DNTTIP2Q5QJE6 756 aaKnown RBP14.41□□□□□ -0.1
CACNA1C-221ENST00000402845 OS9Q13438 667 aaPredicted RBP14.41□□□□□ -0.1
CACNA1C-221ENST00000402845 NAP1L2Q9ULW6 460 aaPredicted RBP14.4□□□□□ -0.1
CACNA1C-221ENST00000402845 PTMAP06454 111 aaKnown RBP14.4□□□□□ -0.1
CACNA1C-221ENST00000402845 PAK3O75914 559 aaPredicted RBP14.39□□□□□ -0.11
CACNA1C-221ENST00000402845 RTN4Q9NQC3 1192 aaKnown RBP14.39□□□□□ -0.11
CACNA1C-221ENST00000402845 HDGFP51858 240 aaKnown RBP14.38□□□□□ -0.11
CACNA1C-221ENST00000402845 TNNT2P45379 298 aaPredicted RBP14.38□□□□□ -0.11
CACNA1C-221ENST00000402845 CFAP53Q96M91 514 aa14.36□□□□□ -0.11
CACNA1C-221ENST00000402845 ARID3AQ99856 593 aa14.35□□□□□ -0.11
CACNA1C-221ENST00000402845 SCRIBQ14160 1630 aa14.35□□□□□ -0.11
CACNA1C-221ENST00000402845 IRX6P78412 446 aaPredicted RBP14.35□□□□□ -0.11
CACNA1C-221ENST00000402845 PLCB2Q00722 1185 aa14.34□□□□□ -0.11
CACNA1C-221ENST00000402845 MTUS2Q5JR59 1369 aa14.34□□□□□ -0.11
CACNA1C-221ENST00000402845 ERICH6BQ5W0A0 696 aa14.32□□□□□ -0.12
CACNA1C-221ENST00000402845 FGD1P98174 961 aa14.32□□□□□ -0.12
CACNA1C-221ENST00000402845 GOLGA6L6A8MZA4 724 aa14.31□□□□□ -0.12
CACNA1C-221ENST00000402845 FTSJ3Q8IY81 847 aaKnown RBP14.31□□□□□ -0.12
CACNA1C-221ENST00000402845 MAPK8IP3Q9UPT6 1336 aa14.28□□□□□ -0.12
CACNA1C-221ENST00000402845 RRP7BPQ9NSQ0 103 aa14.28□□□□□ -0.12
CACNA1C-221ENST00000402845 RSF1Q96T23 1441 aaPredicted RBP14.27□□□□□ -0.12
CACNA1C-221ENST00000402845 RB1CC1Q8TDY2 1594 aa14.27□□□□□ -0.13
CACNA1C-221ENST00000402845 CDCA8Q53HL2 280 aa14.26□□□□□ -0.13
CACNA1C-221ENST00000402845 NAP1L5Q96NT1 182 aaPredicted RBP14.26□□□□□ -0.13
CACNA1C-221ENST00000402845 KCNJ4P48050 445 aa14.24□□□□□ -0.13
CACNA1C-221ENST00000402845 NEUROD2Q15784 382 aa14.24□□□□□ -0.13
CACNA1C-221ENST00000402845 SAFB2Q14151 953 aaKnown RBP eCLIP14.24□□□□□ -0.13
CACNA1C-221ENST00000402845 KNSTRNQ9Y448 316 aa14.24□□□□□ -0.13
CACNA1C-221ENST00000402845 TNIKQ9UKE5 1360 aa14.23□□□□□ -0.13
CACNA1C-221ENST00000402845 MIER1Q8N108 512 aa14.21□□□□□ -0.13
CACNA1C-221ENST00000402845 HIRIP3Q9BW71 556 aaPredicted RBP14.21□□□□□ -0.13
CACNA1C-221ENST00000402845 CWC22Q9HCG8 908 aaKnown RBP14.21□□□□□ -0.13
CACNA1C-221ENST00000402845 U2SURPO15042 1029 aaKnown RBP14.21□□□□□ -0.13
CACNA1C-221ENST00000402845 SENP3-EIF4A1A0A087X0R7 540 aa14.2□□□□□ -0.14
CACNA1C-221ENST00000402845 NUDCQ9Y266 331 aa14.2□□□□□ -0.14
CACNA1C-221ENST00000402845 CNKSR2Q8WXI2 1034 aa14.19□□□□□ -0.14
CACNA1C-221ENST00000402845 SRPK2P78362 688 aaKnown RBP14.19□□□□□ -0.14
CACNA1C-221ENST00000402845 CHMP4BQ9H444 224 aaKnown RBP14.19□□□□□ -0.14
CACNA1C-221ENST00000402845 GTF2E1P29083 439 aaPredicted RBP14.19□□□□□ -0.14
CACNA1C-221ENST00000402845 GGT6Q6P531 493 aa14.19□□□□□ -0.14
CACNA1C-221ENST00000402845 STK26Q9P289 416 aa14.19□□□□□ -0.14
CACNA1C-221ENST00000402845 CFDP1Q9UEE9 299 aaPredicted RBP14.18□□□□□ -0.14
CACNA1C-221ENST00000402845 HSP90AB1P08238 724 aaKnown RBP14.18□□□□□ -0.14
CACNA1C-221ENST00000402845 CEP162Q5TB80 1403 aa14.18□□□□□ -0.14
CACNA1C-221ENST00000402845 NRDCO43847 1150 aa14.17□□□□□ -0.14
CACNA1C-221ENST00000402845 GOLGA3Q08378 1498 aa14.17□□□□□ -0.14
CACNA1C-221ENST00000402845 KANK1Q14678 1352 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms