RNA–Protein interactions for RNA: ENST00000401959.5

SNU13-203, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNU13, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-203ENST00000401959 GRIN2BQ13224 1484 aa20.21■□□□□ 0.83
SNU13-203ENST00000401959 ADAMTS12P58397 1594 aa20.19■□□□□ 0.82
SNU13-203ENST00000401959 EFCAB5A4FU69 1503 aa20.18■□□□□ 0.82
SNU13-203ENST00000401959 FHAD1B1AJZ9 1412 aa20.18■□□□□ 0.82
SNU13-203ENST00000401959 HRCP23327 699 aa20.17■□□□□ 0.82
SNU13-203ENST00000401959 TTBK1Q5TCY1 1321 aaPredicted RBP20.11■□□□□ 0.81
SNU13-203ENST00000401959 SNAPC4Q5SXM2 1469 aa20.09■□□□□ 0.81
SNU13-203ENST00000401959 SAMD9Q5K651 1589 aa20.06■□□□□ 0.8
SNU13-203ENST00000401959 MAP3K1Q13233 1512 aa20.05■□□□□ 0.8
SNU13-203ENST00000401959 MAGI1Q96QZ7 1491 aaPredicted RBP20.03■□□□□ 0.8
SNU13-203ENST00000401959 FHOD3Q2V2M9 1422 aa20.01■□□□□ 0.79
SNU13-203ENST00000401959 IQGAP2Q13576 1575 aa20.01■□□□□ 0.79
SNU13-203ENST00000401959 PCF11O94913 1555 aaKnown RBP20■□□□□ 0.79
SNU13-203ENST00000401959 TIAM1Q13009 1591 aa19.99■□□□□ 0.79
SNU13-203ENST00000401959 FBLN2P98095 1184 aa19.99■□□□□ 0.79
SNU13-203ENST00000401959 P3H3Q8IVL6 736 aa19.98■□□□□ 0.79
SNU13-203ENST00000401959 FYCO1Q9BQS8 1478 aa19.98■□□□□ 0.79
SNU13-203ENST00000401959 FMN1Q68DA7 1419 aa19.98■□□□□ 0.79
SNU13-203ENST00000401959 CHD1O14646 1710 aa19.97■□□□□ 0.79
SNU13-203ENST00000401959 CFAP43Q8NDM7 1665 aa19.97■□□□□ 0.79
SNU13-203ENST00000401959 GRIN2AQ12879 1464 aa19.96■□□□□ 0.79
SNU13-203ENST00000401959 SYNJ2O15056 1496 aa19.95■□□□□ 0.78
SNU13-203ENST00000401959 CASKIN1Q8WXD9 1431 aa19.95■□□□□ 0.78
SNU13-203ENST00000401959 CHMP7Q8WUX9 453 aaPredicted RBP19.94■□□□□ 0.78
SNU13-203ENST00000401959 KANK4Q5T7N3 995 aaPredicted RBP19.93■□□□□ 0.78
SNU13-203ENST00000401959 KIAA0586Q9BVV6 1533 aa19.92■□□□□ 0.78
SNU13-203ENST00000401959 UGGT2Q9NYU1 1516 aa19.91■□□□□ 0.78
SNU13-203ENST00000401959 ZEB1P37275 1124 aaPredicted RBP19.9■□□□□ 0.78
SNU13-203ENST00000401959 LRRC9Q6ZRR7 1453 aa19.87■□□□□ 0.77
SNU13-203ENST00000401959 CEP170Q5SW79 1584 aa19.84■□□□□ 0.77
SNU13-203ENST00000401959 RRBP1Q9P2E9 1410 aaKnown RBP19.83■□□□□ 0.76
SNU13-203ENST00000401959 ATP1B4Q9UN42 357 aaPredicted RBP19.81■□□□□ 0.76
SNU13-203ENST00000401959 KIAA0556O60303 1618 aa19.8■□□□□ 0.76
SNU13-203ENST00000401959 NUP160Q12769 1436 aa19.8■□□□□ 0.76
SNU13-203ENST00000401959 LRRIQ1Q96JM4 1722 aa19.79■□□□□ 0.76
SNU13-203ENST00000401959 HECW1Q76N89 1606 aa19.78■□□□□ 0.76
SNU13-203ENST00000401959 DISP1Q96F81 1524 aa19.76■□□□□ 0.75
SNU13-203ENST00000401959 CCDC18Q5T9S5 1454 aa19.75■□□□□ 0.75
SNU13-203ENST00000401959 OSCARQ8IYS5 282 aa19.75■□□□□ 0.75
SNU13-203ENST00000401959 HNRNPUL2Q1KMD3 747 aaKnown RBP19.74■□□□□ 0.75
SNU13-203ENST00000401959 CCNB3Q8WWL7 1395 aa19.74■□□□□ 0.75
SNU13-203ENST00000401959 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.72■□□□□ 0.75
SNU13-203ENST00000401959 CCER1Q8TC90 406 aaPredicted RBP19.72■□□□□ 0.75
SNU13-203ENST00000401959 CLASP1Q7Z460 1538 aa19.69■□□□□ 0.74
SNU13-203ENST00000401959 EHBP1L1Q8N3D4 1523 aa19.68■□□□□ 0.74
SNU13-203ENST00000401959 MTUS2Q5JR59 1369 aa19.68■□□□□ 0.74
SNU13-203ENST00000401959 CARMIL2Q6F5E8 1435 aa19.68■□□□□ 0.74
SNU13-203ENST00000401959 PHLDB1Q86UU1 1377 aa19.67■□□□□ 0.74
SNU13-203ENST00000401959 SUPT6HQ7KZ85 1726 aaKnown RBP19.66■□□□□ 0.74
SNU13-203ENST00000401959 EPRSP07814 1512 aaKnown RBP19.65■□□□□ 0.74
SNU13-203ENST00000401959 RAPGEF6Q8TEU7 1601 aa19.65■□□□□ 0.74
SNU13-203ENST00000401959 JPH4Q96JJ6 628 aa19.64■□□□□ 0.73
SNU13-203ENST00000401959 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.59■□□□□ 0.73
SNU13-203ENST00000401959 NCOA2Q15596 1464 aa19.58■□□□□ 0.73
SNU13-203ENST00000401959 DNAJC5Q9H3Z4 198 aa19.58■□□□□ 0.72
SNU13-203ENST00000401959 CDK13Q14004 1512 aaKnown RBP19.58■□□□□ 0.72
SNU13-203ENST00000401959 MAGI3Q5TCQ9 1506 aa19.58■□□□□ 0.72
SNU13-203ENST00000401959 SHROOM2Q13796 1616 aa19.57■□□□□ 0.72
SNU13-203ENST00000401959 NUP153P49790 1475 aaKnown RBP19.56■□□□□ 0.72
SNU13-203ENST00000401959 ARHGEF11O15085 1522 aa19.56■□□□□ 0.72
SNU13-203ENST00000401959 FGD6Q6ZV73 1430 aa19.55■□□□□ 0.72
SNU13-203ENST00000401959 ERCC6L2Q5T890 1561 aa19.54■□□□□ 0.72
SNU13-203ENST00000401959 MYOM3Q5VTT5 1437 aa19.53■□□□□ 0.72
SNU13-203ENST00000401959 PRG4Q92954 1404 aaPredicted RBP19.53■□□□□ 0.72
SNU13-203ENST00000401959 FAM50AQ14320 339 aaKnown RBP19.52■□□□□ 0.71
SNU13-203ENST00000401959 ABCA8O94911 1581 aa19.5■□□□□ 0.71
SNU13-203ENST00000401959 PLB1Q6P1J6 1458 aa19.5■□□□□ 0.71
SNU13-203ENST00000401959 ITGAEP38570 1179 aa19.49■□□□□ 0.71
SNU13-203ENST00000401959 CDK11AQ9UQ88 783 aaPredicted RBP19.48■□□□□ 0.71
SNU13-203ENST00000401959 PTPN23Q9H3S7 1636 aa19.46■□□□□ 0.71
SNU13-203ENST00000401959 RIMBP3CA6NJZ7 1639 aa19.45■□□□□ 0.7
SNU13-203ENST00000401959 RIMBP3BA6NNM3 1639 aa19.45■□□□□ 0.7
SNU13-203ENST00000401959 RIMBP3Q9UFD9 1639 aa19.45■□□□□ 0.7
SNU13-203ENST00000401959 ARID3CA6NKF2 412 aa19.43■□□□□ 0.7
SNU13-203ENST00000401959 TCOF1Q13428 1488 aaKnown RBP19.42■□□□□ 0.7
SNU13-203ENST00000401959 CLSPNQ9HAW4 1339 aa19.42■□□□□ 0.7
SNU13-203ENST00000401959 PTPRGP23470 1445 aa19.42■□□□□ 0.7
SNU13-203ENST00000401959 MIA2Q96PC5 1412 aa19.42■□□□□ 0.7
SNU13-203ENST00000401959 SETD5Q9C0A6 1442 aa19.42■□□□□ 0.7
SNU13-203ENST00000401959 TROQ12816 1431 aaPredicted RBP19.41■□□□□ 0.7
SNU13-203ENST00000401959 ADCY10Q96PN6 1610 aa19.41■□□□□ 0.7
SNU13-203ENST00000401959 DHX57Q6P158 1386 aaKnown RBP19.4■□□□□ 0.7
SNU13-203ENST00000401959 RAB3GAP2Q9H2M9 1393 aa19.38■□□□□ 0.69
SNU13-203ENST00000401959 ITSN2Q9NZM3 1697 aa19.36■□□□□ 0.69
SNU13-203ENST00000401959 ATP10BO94823 1461 aa19.35■□□□□ 0.69
SNU13-203ENST00000401959 UACAQ9BZF9 1416 aa19.32■□□□□ 0.68
SNU13-203ENST00000401959 KIF14Q15058 1648 aa19.3■□□□□ 0.68
SNU13-203ENST00000401959 PLEKHD1A6NEE1 506 aa19.3■□□□□ 0.68
SNU13-203ENST00000401959 PTPRKQ15262 1439 aa19.29■□□□□ 0.68
SNU13-203ENST00000401959 CYB5RLQ6IPT4 315 aa19.29■□□□□ 0.68
SNU13-203ENST00000401959 HFM1A2PYH4 1435 aa19.29■□□□□ 0.68
SNU13-203ENST00000401959 ABCC2Q92887 1545 aa19.28■□□□□ 0.68
SNU13-203ENST00000401959 GCC2Q8IWJ2 1684 aa19.25■□□□□ 0.67
SNU13-203ENST00000401959 DNMT1P26358 1616 aaKnown RBP19.25■□□□□ 0.67
SNU13-203ENST00000401959 AKNAQ7Z591 1439 aa19.25■□□□□ 0.67
SNU13-203ENST00000401959 GPATCH8Q9UKJ3 1502 aaKnown RBP19.24■□□□□ 0.67
SNU13-203ENST00000401959 CDC42BPAQ5VT25 1732 aa19.23■□□□□ 0.67
SNU13-203ENST00000401959 NAIPQ13075 1403 aa19.22■□□□□ 0.67
SNU13-203ENST00000401959 ABCC10Q5T3U5 1492 aa19.22■□□□□ 0.67
SNU13-203ENST00000401959 UHRF1BP1LA0JNW5 1464 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms