RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 PLEKHG5O94827 1062 aa19.86■□□□□ 0.77
GABPA-202ENST00000400075 EIF4G1Q04637 1599 aaKnown RBP19.86■□□□□ 0.77
GABPA-202ENST00000400075 A0A0G2JS52 829 aa19.85■□□□□ 0.77
GABPA-202ENST00000400075 HAP1P54257 671 aaPredicted RBP19.84■□□□□ 0.77
GABPA-202ENST00000400075 MROH2BQ7Z745 1585 aa19.84■□□□□ 0.77
GABPA-202ENST00000400075 OSCARQ8IYS5 282 aa19.84■□□□□ 0.77
GABPA-202ENST00000400075 CEP164Q9UPV0 1460 aa19.81■□□□□ 0.76
GABPA-202ENST00000400075 CYB5RLQ6IPT4 315 aa19.81■□□□□ 0.76
GABPA-202ENST00000400075 DIEXFQ68CQ4 756 aaKnown RBP19.79■□□□□ 0.76
GABPA-202ENST00000400075 RGL3Q3MIN7 710 aa19.76■□□□□ 0.75
GABPA-202ENST00000400075 CCDC88BA6NC98 1476 aa19.76■□□□□ 0.75
GABPA-202ENST00000400075 ATAD2BQ9ULI0 1458 aa19.75■□□□□ 0.75
GABPA-202ENST00000400075 CANXP27824 592 aaKnown RBP19.75■□□□□ 0.75
GABPA-202ENST00000400075 ZBTB7CA1YPR0 619 aa19.74■□□□□ 0.75
GABPA-202ENST00000400075 CCNB3Q8WWL7 1395 aa19.72■□□□□ 0.75
GABPA-202ENST00000400075 BCL11AQ9H165 835 aa19.71■□□□□ 0.75
GABPA-202ENST00000400075 ACIN1Q9UKV3 1341 aaKnown RBP19.71■□□□□ 0.75
GABPA-202ENST00000400075 NPM2Q86SE8 214 aaKnown RBP19.69■□□□□ 0.74
GABPA-202ENST00000400075 JPH4Q96JJ6 628 aa19.68■□□□□ 0.74
GABPA-202ENST00000400075 HDGFP51858 240 aaKnown RBP19.67■□□□□ 0.74
GABPA-202ENST00000400075 GGT6Q6P531 493 aa19.67■□□□□ 0.74
GABPA-202ENST00000400075 EFCAB2Q5VUJ9 269 aa19.66■□□□□ 0.74
GABPA-202ENST00000400075 CEP162Q5TB80 1403 aa19.66■□□□□ 0.74
GABPA-202ENST00000400075 LMOD2Q6P5Q4 547 aa19.65■□□□□ 0.74
GABPA-202ENST00000400075 FHAD1B1AJZ9 1412 aa19.65■□□□□ 0.74
GABPA-202ENST00000400075 TMC1Q8TDI8 760 aa19.61■□□□□ 0.73
GABPA-202ENST00000400075 TNIKQ9UKE5 1360 aa19.61■□□□□ 0.73
GABPA-202ENST00000400075 KANK1Q14678 1352 aa19.6■□□□□ 0.73
GABPA-202ENST00000400075 FANCD2Q9BXW9 1451 aa19.59■□□□□ 0.73
GABPA-202ENST00000400075 POGKQ9P215 609 aa19.58■□□□□ 0.73
GABPA-202ENST00000400075 ZNF316A6NFI3 1004 aaPredicted RBP19.58■□□□□ 0.72
GABPA-202ENST00000400075 AEBP2Q6ZN18 517 aaPredicted RBP19.57■□□□□ 0.72
GABPA-202ENST00000400075 ABCC8Q09428 1581 aa19.51■□□□□ 0.71
GABPA-202ENST00000400075 TOP2AP11388 1531 aaKnown RBP19.51■□□□□ 0.71
GABPA-202ENST00000400075 MYT1Q01538 1121 aa19.5■□□□□ 0.71
GABPA-202ENST00000400075 CDCA8Q53HL2 280 aa19.45■□□□□ 0.7
GABPA-202ENST00000400075 SMARCA4P51532 1647 aa19.44■□□□□ 0.7
GABPA-202ENST00000400075 WDR43Q15061 677 aaKnown RBP eCLIP19.44■□□□□ 0.7
GABPA-202ENST00000400075 WIZO95785 1651 aa19.44■□□□□ 0.7
GABPA-202ENST00000400075 EIF4G2P78344 907 aaKnown RBP eCLIP19.43■□□□□ 0.7
GABPA-202ENST00000400075 PTPRGP23470 1445 aa19.43■□□□□ 0.7
GABPA-202ENST00000400075 DDX10Q13206 875 aaKnown RBP19.41■□□□□ 0.7
GABPA-202ENST00000400075 FMN1Q68DA7 1419 aa19.4■□□□□ 0.7
GABPA-202ENST00000400075 KIF3BO15066 747 aa19.39■□□□□ 0.69
GABPA-202ENST00000400075 NCAPD3P42695 1498 aa19.39■□□□□ 0.69
GABPA-202ENST00000400075 PPM1GO15355 546 aaPredicted RBP19.39■□□□□ 0.69
GABPA-202ENST00000400075 SALL2Q9Y467 1007 aaPredicted RBP19.38■□□□□ 0.69
GABPA-202ENST00000400075 FAM69CQ0P6D2 419 aa19.38■□□□□ 0.69
GABPA-202ENST00000400075 SPAG9O60271 1321 aaKnown RBP19.36■□□□□ 0.69
GABPA-202ENST00000400075 CARD11Q9BXL7 1154 aa19.36■□□□□ 0.69
GABPA-202ENST00000400075 FAM9BQ8IZU0 186 aa19.34■□□□□ 0.69
GABPA-202ENST00000400075 EID1Q9Y6B2 187 aa19.34■□□□□ 0.69
GABPA-202ENST00000400075 RAPGEF2Q9Y4G8 1499 aa19.33■□□□□ 0.69
GABPA-202ENST00000400075 ARXQ96QS3 562 aa19.33■□□□□ 0.68
GABPA-202ENST00000400075 CFAP53Q96M91 514 aa19.31■□□□□ 0.68
GABPA-202ENST00000400075 WASHC2CQ9Y4E1 1318 aa19.3■□□□□ 0.68
GABPA-202ENST00000400075 RSPH4AQ5TD94 716 aa19.3■□□□□ 0.68
GABPA-202ENST00000400075 DNAJC5BQ9UF47 199 aa19.3■□□□□ 0.68
GABPA-202ENST00000400075 KNSTRNQ9Y448 316 aa19.29■□□□□ 0.68
GABPA-202ENST00000400075 HNRNPMP52272 730 aaKnown RBP eCLIP19.28■□□□□ 0.68
GABPA-202ENST00000400075 HIRIP3Q9BW71 556 aaPredicted RBP19.28■□□□□ 0.68
GABPA-202ENST00000400075 DCAF11Q8TEB1 546 aa19.27■□□□□ 0.67
GABPA-202ENST00000400075 SAFB2Q14151 953 aaKnown RBP eCLIP19.26■□□□□ 0.67
GABPA-202ENST00000400075 STK26Q9P289 416 aa19.26■□□□□ 0.67
GABPA-202ENST00000400075 GAPVD1Q14C86 1478 aa19.25■□□□□ 0.67
GABPA-202ENST00000400075 SRPK2P78362 688 aaKnown RBP19.25■□□□□ 0.67
GABPA-202ENST00000400075 MRS2Q9HD23 443 aa19.22■□□□□ 0.67
GABPA-202ENST00000400075 HNRNPUQ00839 825 aaKnown RBP eCLIP19.21■□□□□ 0.67
GABPA-202ENST00000400075 FHOD3Q2V2M9 1422 aa19.21■□□□□ 0.67
GABPA-202ENST00000400075 PKD2Q13563 968 aa19.21■□□□□ 0.67
GABPA-202ENST00000400075 ANKRD30AQ9BXX3 1397 aa19.21■□□□□ 0.67
GABPA-202ENST00000400075 SOX12O15370 315 aa19.2■□□□□ 0.66
GABPA-202ENST00000400075 AQRO60306 1485 aaKnown RBP eCLIP19.2■□□□□ 0.66
GABPA-202ENST00000400075 ARHGAP35Q9NRY4 1499 aa19.2■□□□□ 0.66
GABPA-202ENST00000400075 NPHP1O15259 732 aa19.18■□□□□ 0.66
GABPA-202ENST00000400075 FGD5Q6ZNL6 1462 aa19.18■□□□□ 0.66
GABPA-202ENST00000400075 NUP155O75694 1391 aa19.17■□□□□ 0.66
GABPA-202ENST00000400075 RAD54L2Q9Y4B4 1467 aa19.17■□□□□ 0.66
GABPA-202ENST00000400075 NUDCQ9Y266 331 aa19.17■□□□□ 0.66
GABPA-202ENST00000400075 CC2D2AQ9P2K1 1620 aa19.16■□□□□ 0.66
GABPA-202ENST00000400075 PAK3O75914 559 aaPredicted RBP19.16■□□□□ 0.66
GABPA-202ENST00000400075 CCDC18Q5T9S5 1454 aa19.15■□□□□ 0.66
GABPA-202ENST00000400075 VPS8Q8N3P4 1428 aa19.14■□□□□ 0.65
GABPA-202ENST00000400075 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.13■□□□□ 0.65
GABPA-202ENST00000400075 KANK4Q5T7N3 995 aaPredicted RBP19.12■□□□□ 0.65
GABPA-202ENST00000400075 CCDC9Q9Y3X0 531 aaKnown RBP19.12■□□□□ 0.65
GABPA-202ENST00000400075 TNNT2P45379 298 aaPredicted RBP19.12■□□□□ 0.65
GABPA-202ENST00000400075 SIN3AQ96ST3 1273 aa19.11■□□□□ 0.65
GABPA-202ENST00000400075 NESP48681 1621 aa19.11■□□□□ 0.65
GABPA-202ENST00000400075 TMF1P82094 1093 aa19.1■□□□□ 0.65
GABPA-202ENST00000400075 MAPK8IP3Q9UPT6 1336 aa19.09■□□□□ 0.65
GABPA-202ENST00000400075 MRC2Q9UBG0 1479 aa19.09■□□□□ 0.65
GABPA-202ENST00000400075 CSB-PGBD3P0DP91 1061 aa19.08■□□□□ 0.64
GABPA-202ENST00000400075 GRIN2BQ13224 1484 aa19.05■□□□□ 0.64
GABPA-202ENST00000400075 HDGFL2Q7Z4V5 671 aaPredicted RBP19.05■□□□□ 0.64
GABPA-202ENST00000400075 IGF1RP08069 1367 aa19.04■□□□□ 0.64
GABPA-202ENST00000400075 NUTM2DQ5VT03 806 aaPredicted RBP19.04■□□□□ 0.64
GABPA-202ENST00000400075 U2SURPO15042 1029 aaKnown RBP19.04■□□□□ 0.64
GABPA-202ENST00000400075 MYH16Q9H6N6 1097 aa19.03■□□□□ 0.64
GABPA-202ENST00000400075 FOXD1Q16676 465 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms