RNA–Protein interactions for RNA: ENST00000399516.7

LAMA3-203, Transcript of laminin subunit alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA3, Length 9,834 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-203ENST00000399516 ESF1Q9H501 851 aaKnown RBP14.84□□□□□ -0.03
LAMA3-203ENST00000399516 GOLGA3Q08378 1498 aa14.83□□□□□ -0.03
LAMA3-203ENST00000399516 EIF4G2P78344 907 aaKnown RBP eCLIP14.83□□□□□ -0.04
LAMA3-203ENST00000399516 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.81□□□□□ -0.04
LAMA3-203ENST00000399516 KDM2AQ9Y2K7 1162 aa14.81□□□□□ -0.04
LAMA3-203ENST00000399516 NCLP19338 710 aaKnown RBP14.81□□□□□ -0.04
LAMA3-203ENST00000399516 TNNT2P45379 298 aaPredicted RBP14.79□□□□□ -0.04
LAMA3-203ENST00000399516 PPM1GO15355 546 aaPredicted RBP14.78□□□□□ -0.04
LAMA3-203ENST00000399516 NOP58Q9Y2X3 529 aaKnown RBP14.77□□□□□ -0.04
LAMA3-203ENST00000399516 ERICH6BQ5W0A0 696 aa14.77□□□□□ -0.05
LAMA3-203ENST00000399516 EEA1Q15075 1411 aa14.76□□□□□ -0.05
LAMA3-203ENST00000399516 PTMAP06454 111 aaKnown RBP14.75□□□□□ -0.05
LAMA3-203ENST00000399516 LAS1LQ9Y4W2 734 aaKnown RBP14.75□□□□□ -0.05
LAMA3-203ENST00000399516 NAP1L5Q96NT1 182 aaPredicted RBP14.74□□□□□ -0.05
LAMA3-203ENST00000399516 SUPT16HQ9Y5B9 1047 aaKnown RBP14.74□□□□□ -0.05
LAMA3-203ENST00000399516 CDK11BP21127 795 aaKnown RBP14.72□□□□□ -0.05
LAMA3-203ENST00000399516 RTN4Q9NQC3 1192 aaKnown RBP14.72□□□□□ -0.05
LAMA3-203ENST00000399516 RSF1Q96T23 1441 aaPredicted RBP14.72□□□□□ -0.05
LAMA3-203ENST00000399516 CASC1Q6TDU7 716 aa14.71□□□□□ -0.05
LAMA3-203ENST00000399516 PPP4R2Q9NY27 417 aa14.71□□□□□ -0.05
LAMA3-203ENST00000399516 RRP7BPQ9NSQ0 103 aa14.71□□□□□ -0.05
LAMA3-203ENST00000399516 TSPY4P0CV99 314 aa14.69□□□□□ -0.06
LAMA3-203ENST00000399516 TSPY10P0CW01 314 aa14.69□□□□□ -0.06
LAMA3-203ENST00000399516 FTSJ3Q8IY81 847 aaKnown RBP14.68□□□□□ -0.06
LAMA3-203ENST00000399516 DNTTIP2Q5QJE6 756 aaKnown RBP14.67□□□□□ -0.06
LAMA3-203ENST00000399516 ZRSR1Q15695 479 aaKnown RBP14.65□□□□□ -0.06
LAMA3-203ENST00000399516 CEP164Q9UPV0 1460 aa14.64□□□□□ -0.07
LAMA3-203ENST00000399516 KNSTRNQ9Y448 316 aa14.64□□□□□ -0.07
LAMA3-203ENST00000399516 SENP3-EIF4A1A0A087X0R7 540 aa14.63□□□□□ -0.07
LAMA3-203ENST00000399516 CFAP53Q96M91 514 aa14.63□□□□□ -0.07
LAMA3-203ENST00000399516 RGS3P49796 1198 aa14.62□□□□□ -0.07
LAMA3-203ENST00000399516 PLPPR3Q6T4P5 718 aa14.61□□□□□ -0.07
LAMA3-203ENST00000399516 TNIKQ9UKE5 1360 aa14.6□□□□□ -0.07
LAMA3-203ENST00000399516 TPRNQ4KMQ1 711 aa14.59□□□□□ -0.07
LAMA3-203ENST00000399516 CDCA8Q53HL2 280 aa14.59□□□□□ -0.07
LAMA3-203ENST00000399516 DEKP35659 375 aaKnown RBP14.58□□□□□ -0.07
LAMA3-203ENST00000399516 NPM1P06748 294 aaKnown RBP eCLIP14.57□□□□□ -0.08
LAMA3-203ENST00000399516 WRNQ14191 1432 aaPredicted RBP eCLIP14.56□□□□□ -0.08
LAMA3-203ENST00000399516 CARD11Q9BXL7 1154 aa14.56□□□□□ -0.08
LAMA3-203ENST00000399516 GOLGA6L6A8MZA4 724 aa14.56□□□□□ -0.08
LAMA3-203ENST00000399516 HSP90AB1P08238 724 aaKnown RBP14.55□□□□□ -0.08
LAMA3-203ENST00000399516 B4GALNT3Q6L9W6 998 aa14.54□□□□□ -0.08
LAMA3-203ENST00000399516 L1TD1Q5T7N2 865 aaKnown RBP14.53□□□□□ -0.08
LAMA3-203ENST00000399516 MAPK8IP3Q9UPT6 1336 aa14.52□□□□□ -0.08
LAMA3-203ENST00000399516 PPP1R15AO75807 674 aaPredicted RBP14.52□□□□□ -0.09
LAMA3-203ENST00000399516 RB1CC1Q8TDY2 1594 aa14.52□□□□□ -0.09
LAMA3-203ENST00000399516 HSCBQ8IWL3 235 aa14.51□□□□□ -0.09
LAMA3-203ENST00000399516 FRAT1Q92837 279 aaPredicted RBP14.51□□□□□ -0.09
LAMA3-203ENST00000399516 ZBTB7CA1YPR0 619 aa14.51□□□□□ -0.09
LAMA3-203ENST00000399516 KIF27Q86VH2 1401 aa14.51□□□□□ -0.09
LAMA3-203ENST00000399516 CHAF1AQ13111 956 aaPredicted RBP14.5□□□□□ -0.09
LAMA3-203ENST00000399516 RGL3Q3MIN7 710 aa14.5□□□□□ -0.09
LAMA3-203ENST00000399516 SENP3Q9H4L4 574 aaPredicted RBP14.49□□□□□ -0.09
LAMA3-203ENST00000399516 RBM19Q9Y4C8 960 aaKnown RBP14.49□□□□□ -0.09
LAMA3-203ENST00000399516 CHMP4BQ9H444 224 aaKnown RBP14.49□□□□□ -0.09
LAMA3-203ENST00000399516 NEUROD2Q15784 382 aa14.49□□□□□ -0.09
LAMA3-203ENST00000399516 C14orf37Q86TY3 774 aa14.49□□□□□ -0.09
LAMA3-203ENST00000399516 CHMP7Q8WUX9 453 aaPredicted RBP14.48□□□□□ -0.09
LAMA3-203ENST00000399516 MSNP26038 577 aaKnown RBP14.48□□□□□ -0.09
LAMA3-203ENST00000399516 PLCB2Q00722 1185 aa14.48□□□□□ -0.09
LAMA3-203ENST00000399516 SIN3AQ96ST3 1273 aa14.47□□□□□ -0.09
LAMA3-203ENST00000399516 CCNB3Q8WWL7 1395 aa14.47□□□□□ -0.09
LAMA3-203ENST00000399516 MS4A1P11836 297 aa14.47□□□□□ -0.09
LAMA3-203ENST00000399516 CC2D1BQ5T0F9 858 aaKnown RBP14.46□□□□□ -0.09
LAMA3-203ENST00000399516 CCER2I3L3R5 266 aa14.46□□□□□ -0.09
LAMA3-203ENST00000399516 BAZ1BQ9UIG0 1483 aaKnown RBP14.46□□□□□ -0.1
LAMA3-203ENST00000399516 A0A0G2JS52 829 aa14.45□□□□□ -0.1
LAMA3-203ENST00000399516 NRDCO43847 1150 aa14.44□□□□□ -0.1
LAMA3-203ENST00000399516 CFDP1Q9UEE9 299 aaPredicted RBP14.44□□□□□ -0.1
LAMA3-203ENST00000399516 NUDCQ9Y266 331 aa14.43□□□□□ -0.1
LAMA3-203ENST00000399516 PLEKHD1A6NEE1 506 aa14.42□□□□□ -0.1
LAMA3-203ENST00000399516 FHAD1B1AJZ9 1412 aa14.41□□□□□ -0.1
LAMA3-203ENST00000399516 SPRYD3Q8NCJ5 442 aa14.39□□□□□ -0.11
LAMA3-203ENST00000399516 PLEKHG5O94827 1062 aa14.39□□□□□ -0.11
LAMA3-203ENST00000399516 OS9Q13438 667 aaPredicted RBP14.39□□□□□ -0.11
LAMA3-203ENST00000399516 ARHGAP35Q9NRY4 1499 aa14.38□□□□□ -0.11
LAMA3-203ENST00000399516 FGD1P98174 961 aa14.38□□□□□ -0.11
LAMA3-203ENST00000399516 SETD5Q9C0A6 1442 aa14.37□□□□□ -0.11
LAMA3-203ENST00000399516 GOLGA6L4A6NEF3 574 aa14.37□□□□□ -0.11
LAMA3-203ENST00000399516 KCNH8Q96L42 1107 aa14.37□□□□□ -0.11
LAMA3-203ENST00000399516 KTN1Q86UP2 1357 aaKnown RBP14.37□□□□□ -0.11
LAMA3-203ENST00000399516 KCNJ4P48050 445 aa14.36□□□□□ -0.11
LAMA3-203ENST00000399516 ARID4BQ4LE39 1312 aaPredicted RBP14.36□□□□□ -0.11
LAMA3-203ENST00000399516 PTMSP20962 102 aa14.36□□□□□ -0.11
LAMA3-203ENST00000399516 MCCP23508 829 aa14.36□□□□□ -0.11
LAMA3-203ENST00000399516 DRC7Q8IY82 874 aa14.34□□□□□ -0.11
LAMA3-203ENST00000399516 EIF4G1Q04637 1599 aaKnown RBP14.34□□□□□ -0.11
LAMA3-203ENST00000399516 TMF1P82094 1093 aa14.34□□□□□ -0.11
LAMA3-203ENST00000399516 TIMELESSQ9UNS1 1208 aa14.34□□□□□ -0.11
LAMA3-203ENST00000399516 NACADO15069 1562 aa14.33□□□□□ -0.12
LAMA3-203ENST00000399516 GBP4Q96PP9 640 aa14.33□□□□□ -0.12
LAMA3-203ENST00000399516 PNNQ9H307 717 aaKnown RBP14.33□□□□□ -0.12
LAMA3-203ENST00000399516 TAOK2Q9UL54 1235 aa14.33□□□□□ -0.12
LAMA3-203ENST00000399516 U2SURPO15042 1029 aaKnown RBP14.33□□□□□ -0.12
LAMA3-203ENST00000399516 VPS8Q8N3P4 1428 aa14.33□□□□□ -0.12
LAMA3-203ENST00000399516 BAZ1AQ9NRL2 1556 aaPredicted RBP14.33□□□□□ -0.12
LAMA3-203ENST00000399516 NAP1L2Q9ULW6 460 aaPredicted RBP14.32□□□□□ -0.12
LAMA3-203ENST00000399516 POGKQ9P215 609 aa14.31□□□□□ -0.12
LAMA3-203ENST00000399516 CFAP44Q96MT7 982 aa14.31□□□□□ -0.12
LAMA3-203ENST00000399516 HSPA5P11021 654 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms