RNA–Protein interactions for RNA: ENST00000398676.3

CCAR1-202, Transcript of cell division cycle and apoptosis regulator 1, humanhuman

TSL 3

Gene CCAR1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCAR1-202ENST00000398676 C19orf67A6NJJ6 358 aa18.19■□□□□ 0.5
CCAR1-202ENST00000398676 SHROOM4Q9ULL8 1493 aa18.19■□□□□ 0.5
CCAR1-202ENST00000398676 CD44P16070 742 aaKnown RBP18.16■□□□□ 0.5
CCAR1-202ENST00000398676 SPOCK2Q92563 424 aa18.14■□□□□ 0.49
CCAR1-202ENST00000398676 PAK3O75914 559 aaPredicted RBP18.13■□□□□ 0.49
CCAR1-202ENST00000398676 EIF4G1Q04637 1599 aaKnown RBP18.12■□□□□ 0.49
CCAR1-202ENST00000398676 NUBP1P53384 320 aa18.11■□□□□ 0.49
CCAR1-202ENST00000398676 RASEFQ8IZ41 740 aa18.07■□□□□ 0.48
CCAR1-202ENST00000398676 TSPYL2Q9H2G4 693 aaPredicted RBP18.05■□□□□ 0.48
CCAR1-202ENST00000398676 ZRANB1Q9UGI0 708 aa18.04■□□□□ 0.48
CCAR1-202ENST00000398676 EVX2Q03828 476 aa18.03■□□□□ 0.48
CCAR1-202ENST00000398676 FAM212AQ96EL1 285 aa18.03■□□□□ 0.48
CCAR1-202ENST00000398676 DCAF8Q5TAQ9 597 aa17.99■□□□□ 0.47
CCAR1-202ENST00000398676 GSE1Q14687 1217 aa17.94■□□□□ 0.46
CCAR1-202ENST00000398676 DCAF8L2P0C7V8 631 aa17.9■□□□□ 0.46
CCAR1-202ENST00000398676 CIZ1Q9ULV3 898 aaPredicted RBP17.9■□□□□ 0.46
CCAR1-202ENST00000398676 ZNF579Q8NAF0 562 aaKnown RBP17.89■□□□□ 0.45
CCAR1-202ENST00000398676 CCDC61Q9Y6R9 512 aa17.88■□□□□ 0.45
CCAR1-202ENST00000398676 SP7Q8TDD2 431 aaPredicted RBP17.87■□□□□ 0.45
CCAR1-202ENST00000398676 MYO15BQ96JP2 1530 aa17.85■□□□□ 0.45
CCAR1-202ENST00000398676 ERCC6Q03468 1493 aa17.83■□□□□ 0.45
CCAR1-202ENST00000398676 PHF12Q96QT6 1004 aa17.83■□□□□ 0.44
CCAR1-202ENST00000398676 CLCN6P51797 869 aa17.79■□□□□ 0.44
CCAR1-202ENST00000398676 PYGBP11216 843 aa17.74■□□□□ 0.43
CCAR1-202ENST00000398676 KIF12Q96FN5 646 aa17.73■□□□□ 0.43
CCAR1-202ENST00000398676 GABBR2O75899 941 aa17.72■□□□□ 0.43
CCAR1-202ENST00000398676 MAP3K13O43283 966 aa17.67■□□□□ 0.42
CCAR1-202ENST00000398676 CHRM1P11229 460 aaPredicted RBP17.66■□□□□ 0.42
CCAR1-202ENST00000398676 PCDHB13Q9Y5F0 798 aa17.64■□□□□ 0.41
CCAR1-202ENST00000398676 SGIP1Q9BQI5 828 aa17.63■□□□□ 0.41
CCAR1-202ENST00000398676 MS4A3Q96HJ5 214 aa17.62■□□□□ 0.41
CCAR1-202ENST00000398676 GALR2O43603 387 aaPredicted RBP17.61■□□□□ 0.41
CCAR1-202ENST00000398676 PKD2Q13563 968 aa17.6■□□□□ 0.41
CCAR1-202ENST00000398676 ECM2O94769 699 aaPredicted RBP17.59■□□□□ 0.41
CCAR1-202ENST00000398676 ZNF467Q7Z7K2 595 aaPredicted RBP17.53■□□□□ 0.4
CCAR1-202ENST00000398676 IFNL1Q8IU54 200 aa17.53■□□□□ 0.4
CCAR1-202ENST00000398676 AMER1Q5JTC6 1135 aaPredicted RBP17.52■□□□□ 0.4
CCAR1-202ENST00000398676 PCDHB8Q9UN66 801 aa17.5■□□□□ 0.39
CCAR1-202ENST00000398676 DCBLD2Q96PD2 775 aa17.48■□□□□ 0.39
CCAR1-202ENST00000398676 RIOK3O14730 519 aaKnown RBP17.41■□□□□ 0.38
CCAR1-202ENST00000398676 TRPC6Q9Y210 931 aa17.41■□□□□ 0.38
CCAR1-202ENST00000398676 SCRIBQ14160 1630 aa17.4■□□□□ 0.38
CCAR1-202ENST00000398676 RTN4Q9NQC3 1192 aaKnown RBP17.4■□□□□ 0.38
CCAR1-202ENST00000398676 THOC2Q8NI27 1593 aaKnown RBP17.38■□□□□ 0.37
CCAR1-202ENST00000398676 TIE1P35590 1138 aa17.38■□□□□ 0.37
CCAR1-202ENST00000398676 RNF25Q96BH1 459 aaPredicted RBP17.38■□□□□ 0.37
CCAR1-202ENST00000398676 RGL2O15211 777 aa17.37■□□□□ 0.37
CCAR1-202ENST00000398676 PDAP1Q13442 181 aaKnown RBP17.35■□□□□ 0.37
CCAR1-202ENST00000398676 TAOK2Q9UL54 1235 aa17.35■□□□□ 0.37
CCAR1-202ENST00000398676 BMP2KQ9NSY1 1161 aaPredicted RBP17.34■□□□□ 0.37
CCAR1-202ENST00000398676 PSEN1P49768 467 aa17.33■□□□□ 0.36
CCAR1-202ENST00000398676 TMEM106CQ9BVX2 250 aa17.33■□□□□ 0.36
CCAR1-202ENST00000398676 VGFO15240 615 aaPredicted RBP17.31■□□□□ 0.36
CCAR1-202ENST00000398676 ASTLQ6HA08 431 aaPredicted RBP17.31■□□□□ 0.36
CCAR1-202ENST00000398676 TTLL13PA6NNM8 815 aa17.3■□□□□ 0.36
CCAR1-202ENST00000398676 ATMINO43313 823 aaPredicted RBP17.3■□□□□ 0.36
CCAR1-202ENST00000398676 POTEIP0CG38 1075 aa17.3■□□□□ 0.36
CCAR1-202ENST00000398676 ATN1P54259 1190 aaPredicted RBP17.25■□□□□ 0.35
CCAR1-202ENST00000398676 ILDR1Q86SU0 546 aaPredicted RBP17.23■□□□□ 0.35
CCAR1-202ENST00000398676 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.21■□□□□ 0.35
CCAR1-202ENST00000398676 ZFP91Q96JP5 570 aaPredicted RBP17.21■□□□□ 0.35
CCAR1-202ENST00000398676 BAZ1AQ9NRL2 1556 aaPredicted RBP17.2■□□□□ 0.34
CCAR1-202ENST00000398676 TRIM35Q9UPQ4 493 aa17.2■□□□□ 0.34
CCAR1-202ENST00000398676 NESP48681 1621 aa17.18■□□□□ 0.34
CCAR1-202ENST00000398676 PELP1Q8IZL8 1130 aaKnown RBP17.17■□□□□ 0.34
CCAR1-202ENST00000398676 GOLGA2Q08379 1002 aa17.16■□□□□ 0.34
CCAR1-202ENST00000398676 RIMBP3CA6NJZ7 1639 aa17.15■□□□□ 0.34
CCAR1-202ENST00000398676 RIMBP3BA6NNM3 1639 aa17.15■□□□□ 0.34
CCAR1-202ENST00000398676 RIMBP3Q9UFD9 1639 aa17.15■□□□□ 0.34
CCAR1-202ENST00000398676 STK25O00506 426 aa17.13■□□□□ 0.33
CCAR1-202ENST00000398676 SLC39A7Q92504 469 aa17.13■□□□□ 0.33
CCAR1-202ENST00000398676 CABP2Q9NPB3 220 aa17.12■□□□□ 0.33
CCAR1-202ENST00000398676 BCL11BQ9C0K0 894 aaPredicted RBP17.11■□□□□ 0.33
CCAR1-202ENST00000398676 STK24Q9Y6E0 443 aa17.1■□□□□ 0.33
CCAR1-202ENST00000398676 NCAPD3P42695 1498 aa17.1■□□□□ 0.33
CCAR1-202ENST00000398676 C7P10643 843 aa17.09■□□□□ 0.33
CCAR1-202ENST00000398676 MKRN3Q13064 507 aaKnown RBP17.09■□□□□ 0.33
CCAR1-202ENST00000398676 DCAF1Q9Y4B6 1507 aa17.08■□□□□ 0.32
CCAR1-202ENST00000398676 SMARCA2P51531 1590 aa17.07■□□□□ 0.32
CCAR1-202ENST00000398676 IER5LQ5T953 404 aa17.06■□□□□ 0.32
CCAR1-202ENST00000398676 METRNQ9UJH8 293 aa17.06■□□□□ 0.32
CCAR1-202ENST00000398676 CHGAP10645 457 aaKnown RBP17.05■□□□□ 0.32
CCAR1-202ENST00000398676 HS6ST3Q8IZP7 471 aa17.02■□□□□ 0.32
CCAR1-202ENST00000398676 SEC24BO95487 1268 aa17■□□□□ 0.31
CCAR1-202ENST00000398676 EFCAB3Q8N7B9 438 aa17■□□□□ 0.31
CCAR1-202ENST00000398676 KIF21AQ7Z4S6 1674 aa16.96■□□□□ 0.31
CCAR1-202ENST00000398676 ARHGEF11O15085 1522 aa16.96■□□□□ 0.3
CCAR1-202ENST00000398676 LAMC3Q9Y6N6 1575 aa16.95■□□□□ 0.3
CCAR1-202ENST00000398676 PLCG2P16885 1265 aa16.94■□□□□ 0.3
CCAR1-202ENST00000398676 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.94■□□□□ 0.34e-7■■■□□ 18.6
CCAR1-202ENST00000398676 IRX5P78411 483 aaPredicted RBP16.93■□□□□ 0.3
CCAR1-202ENST00000398676 SOX12O15370 315 aa16.92■□□□□ 0.3
CCAR1-202ENST00000398676 OCEL1Q9H607 264 aa16.92■□□□□ 0.3
CCAR1-202ENST00000398676 COLQQ9Y215 455 aaPredicted RBP16.91■□□□□ 0.3
CCAR1-202ENST00000398676 PDS5BQ9NTI5 1447 aa16.88■□□□□ 0.29
CCAR1-202ENST00000398676 POTEFA5A3E0 1075 aa16.87■□□□□ 0.29
CCAR1-202ENST00000398676 HMGXB3Q12766 1538 aa16.86■□□□□ 0.29
CCAR1-202ENST00000398676 ZCCHC6Q5VYS8 1495 aaKnown RBP16.85■□□□□ 0.29
CCAR1-202ENST00000398676 CYB5RLQ6IPT4 315 aa16.84■□□□□ 0.29
CCAR1-202ENST00000398676 WDR62O43379 1518 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms