RNA–Protein interactions for RNA: ENST00000398004.3

SLC35E3-202, Transcript of solute carrier family 35 member E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC35E3, Length 17,791 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35E3-202ENST00000398004 RSPH6AQ9H0K4 717 aa10.1□□□□□ -0.79
SLC35E3-202ENST00000398004 WDR43Q15061 677 aaKnown RBP eCLIP10.1□□□□□ -0.79
SLC35E3-202ENST00000398004 HIRIP3Q9BW71 556 aaPredicted RBP10.09□□□□□ -0.79
SLC35E3-202ENST00000398004 PNNQ9H307 717 aaKnown RBP10.07□□□□□ -0.8
SLC35E3-202ENST00000398004 MYH16Q9H6N6 1097 aa10.06□□□□□ -0.8
SLC35E3-202ENST00000398004 MSNP26038 577 aaKnown RBP10.06□□□□□ -0.8
SLC35E3-202ENST00000398004 HSP90AA2PQ14568 343 aaPredicted RBP10.06□□□□□ -0.8
SLC35E3-202ENST00000398004 CHAF1AQ13111 956 aaPredicted RBP10.05□□□□□ -0.8
SLC35E3-202ENST00000398004 EIF4G2P78344 907 aaKnown RBP eCLIP10.04□□□□□ -0.8
SLC35E3-202ENST00000398004 AMER1Q5JTC6 1135 aaPredicted RBP10.04□□□□□ -0.8
SLC35E3-202ENST00000398004 P3H3Q8IVL6 736 aa10.02□□□□□ -0.81
SLC35E3-202ENST00000398004 ARID4BQ4LE39 1312 aaPredicted RBP10.01□□□□□ -0.81
SLC35E3-202ENST00000398004 VSIG10Q8N0Z9 540 aa10.01□□□□□ -0.81
SLC35E3-202ENST00000398004 CASC1Q6TDU7 716 aa10.01□□□□□ -0.81
SLC35E3-202ENST00000398004 IPO9Q96P70 1041 aaKnown RBP10.01□□□□□ -0.81
SLC35E3-202ENST00000398004 HSP90AB1P08238 724 aaKnown RBP10□□□□□ -0.81
SLC35E3-202ENST00000398004 TNNT3P45378 269 aaPredicted RBP10□□□□□ -0.81
SLC35E3-202ENST00000398004 ZRSR1Q15695 479 aaKnown RBP9.98□□□□□ -0.81
SLC35E3-202ENST00000398004 USP35Q9P2H5 1018 aa9.98□□□□□ -0.81
SLC35E3-202ENST00000398004 PLCB2Q00722 1185 aa9.97□□□□□ -0.81
SLC35E3-202ENST00000398004 CCER2I3L3R5 266 aa9.97□□□□□ -0.81
SLC35E3-202ENST00000398004 RGS3P49796 1198 aa9.97□□□□□ -0.81
SLC35E3-202ENST00000398004 GOLGA6L6A8MZA4 724 aa9.96□□□□□ -0.81
SLC35E3-202ENST00000398004 TCERG1O14776 1098 aaKnown RBP9.96□□□□□ -0.82
SLC35E3-202ENST00000398004 HSCBQ8IWL3 235 aa9.96□□□□□ -0.82
SLC35E3-202ENST00000398004 GOLGA6L3A6NEY3 463 aa9.95□□□□□ -0.82
SLC35E3-202ENST00000398004 PTMSP20962 102 aa9.95□□□□□ -0.82
SLC35E3-202ENST00000398004 TPRNQ4KMQ1 711 aa9.94□□□□□ -0.82
SLC35E3-202ENST00000398004 KDM2AQ9Y2K7 1162 aa9.94□□□□□ -0.82
SLC35E3-202ENST00000398004 GZF1Q9H116 711 aaPredicted RBP9.94□□□□□ -0.82
SLC35E3-202ENST00000398004 NRDCO43847 1150 aa9.93□□□□□ -0.82
SLC35E3-202ENST00000398004 ARID3AQ99856 593 aa9.92□□□□□ -0.82
SLC35E3-202ENST00000398004 FTSJ3Q8IY81 847 aaKnown RBP9.92□□□□□ -0.82
SLC35E3-202ENST00000398004 KIAA2012Q0VF49 1180 aa9.92□□□□□ -0.82
SLC35E3-202ENST00000398004 ZNF777Q9ULD5 760 aaPredicted RBP9.91□□□□□ -0.82
SLC35E3-202ENST00000398004 SPRYD3Q8NCJ5 442 aa9.91□□□□□ -0.82
SLC35E3-202ENST00000398004 SENP3-EIF4A1A0A087X0R7 540 aa9.91□□□□□ -0.82
SLC35E3-202ENST00000398004 GBP4Q96PP9 640 aa9.91□□□□□ -0.82
SLC35E3-202ENST00000398004 FANCIQ9NVI1 1328 aa9.9□□□□□ -0.82
SLC35E3-202ENST00000398004 DRC7Q8IY82 874 aa9.9□□□□□ -0.83
SLC35E3-202ENST00000398004 ARID3CA6NKF2 412 aa9.89□□□□□ -0.83
SLC35E3-202ENST00000398004 CHIC2Q9UKJ5 165 aa9.89□□□□□ -0.83
SLC35E3-202ENST00000398004 CCDC180Q9P1Z9 1646 aa9.86□□□□□ -0.83
SLC35E3-202ENST00000398004 PRKCSHP14314 528 aaPredicted RBP9.86□□□□□ -0.83
SLC35E3-202ENST00000398004 GSE1Q14687 1217 aa9.86□□□□□ -0.83
SLC35E3-202ENST00000398004 TIMELESSQ9UNS1 1208 aa9.86□□□□□ -0.83
SLC35E3-202ENST00000398004 MS4A1P11836 297 aa9.85□□□□□ -0.83
SLC35E3-202ENST00000398004 CHMP4BQ9H444 224 aaKnown RBP9.84□□□□□ -0.83
SLC35E3-202ENST00000398004 MYO15BQ96JP2 1530 aa9.84□□□□□ -0.83
SLC35E3-202ENST00000398004 KNSTRNQ9Y448 316 aa9.84□□□□□ -0.83
SLC35E3-202ENST00000398004 PKNOX2Q96KN3 472 aa9.84□□□□□ -0.83
SLC35E3-202ENST00000398004 ANO8Q9HCE9 1232 aaPredicted RBP9.83□□□□□ -0.84
SLC35E3-202ENST00000398004 GOLGA6L4A6NEF3 574 aa9.83□□□□□ -0.84
SLC35E3-202ENST00000398004 RCAN3Q9UKA8 241 aa9.82□□□□□ -0.84
SLC35E3-202ENST00000398004 SLKQ9H2G2 1235 aaPredicted RBP9.82□□□□□ -0.84
SLC35E3-202ENST00000398004 FRAT1Q92837 279 aaPredicted RBP9.81□□□□□ -0.84
SLC35E3-202ENST00000398004 ZBTB7CA1YPR0 619 aa9.81□□□□□ -0.84
SLC35E3-202ENST00000398004 CHGAP10645 457 aaKnown RBP9.8□□□□□ -0.84
SLC35E3-202ENST00000398004 RRP7BPQ9NSQ0 103 aa9.8□□□□□ -0.84
SLC35E3-202ENST00000398004 CFAP44Q96MT7 982 aa9.8□□□□□ -0.84
SLC35E3-202ENST00000398004 SYAP1Q96A49 352 aaPredicted RBP9.8□□□□□ -0.84
SLC35E3-202ENST00000398004 CDCA8Q53HL2 280 aa9.79□□□□□ -0.84
SLC35E3-202ENST00000398004 SIN3AQ96ST3 1273 aa9.79□□□□□ -0.84
SLC35E3-202ENST00000398004 CFAP53Q96M91 514 aa9.79□□□□□ -0.84
SLC35E3-202ENST00000398004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.79□□□□□ -0.84
SLC35E3-202ENST00000398004 CALD1Q05682 793 aaKnown RBP9.77□□□□□ -0.85
SLC35E3-202ENST00000398004 MCCP23508 829 aa9.77□□□□□ -0.85
SLC35E3-202ENST00000398004 PODXL2Q9NZ53 605 aa9.77□□□□□ -0.85
SLC35E3-202ENST00000398004 GOLGA6L1Q8N7Z2 621 aa9.76□□□□□ -0.85
SLC35E3-202ENST00000398004 FAM13BQ9NYF5 915 aa9.76□□□□□ -0.85
SLC35E3-202ENST00000398004 DDX11L8A8MPP1 907 aa9.76□□□□□ -0.85
SLC35E3-202ENST00000398004 ZNF771Q7L3S4 317 aaPredicted RBP9.76□□□□□ -0.85
SLC35E3-202ENST00000398004 PHF14O94880 888 aa9.75□□□□□ -0.85
SLC35E3-202ENST00000398004 CARD11Q9BXL7 1154 aa9.75□□□□□ -0.85
SLC35E3-202ENST00000398004 SKOR2Q2VWA4 1001 aaPredicted RBP9.75□□□□□ -0.85
SLC35E3-202ENST00000398004 PABPN1Q86U42 306 aaKnown RBP eCLIP9.75□□□□□ -0.85
SLC35E3-202ENST00000398004 A0A0U1RQG5 324 aaPredicted RBP9.74□□□□□ -0.85
SLC35E3-202ENST00000398004 CC2D1BQ5T0F9 858 aaKnown RBP9.74□□□□□ -0.85
SLC35E3-202ENST00000398004 RWDD1Q9H446 243 aaPredicted RBP9.74□□□□□ -0.85
SLC35E3-202ENST00000398004 FBLN2P98095 1184 aa9.74□□□□□ -0.85
SLC35E3-202ENST00000398004 FAM43AQ8N2R8 423 aa9.74□□□□□ -0.85
SLC35E3-202ENST00000398004 CLIP1P30622 1438 aa9.73□□□□□ -0.85
SLC35E3-202ENST00000398004 PDE4AP27815 886 aa9.73□□□□□ -0.85
SLC35E3-202ENST00000398004 FGD1P98174 961 aa9.73□□□□□ -0.85
SLC35E3-202ENST00000398004 STAG3Q9UJ98 1225 aa9.73□□□□□ -0.85
SLC35E3-202ENST00000398004 NEUROD2Q15784 382 aa9.73□□□□□ -0.85
SLC35E3-202ENST00000398004 SETQ01105 290 aaPredicted RBP9.73□□□□□ -0.85
SLC35E3-202ENST00000398004 TSPY4P0CV99 314 aa9.73□□□□□ -0.85
SLC35E3-202ENST00000398004 TSPY10P0CW01 314 aa9.73□□□□□ -0.85
SLC35E3-202ENST00000398004 MAP7D2Q96T17 732 aa9.72□□□□□ -0.85
SLC35E3-202ENST00000398004 CSPP1Q1MSJ5 1256 aa9.72□□□□□ -0.85
SLC35E3-202ENST00000398004 KCNJ4P48050 445 aa9.72□□□□□ -0.85
SLC35E3-202ENST00000398004 MTERF4Q7Z6M4 381 aaKnown RBP9.71□□□□□ -0.85
SLC35E3-202ENST00000398004 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.71□□□□□ -0.86
SLC35E3-202ENST00000398004 NUDCQ9Y266 331 aa9.71□□□□□ -0.86
SLC35E3-202ENST00000398004 CEP162Q5TB80 1403 aa9.7□□□□□ -0.86
SLC35E3-202ENST00000398004 RGL3Q3MIN7 710 aa9.7□□□□□ -0.86
SLC35E3-202ENST00000398004 SLC4A3P48751 1232 aa9.7□□□□□ -0.86
SLC35E3-202ENST00000398004 IPO8O15397 1037 aaKnown RBP9.69□□□□□ -0.86
SLC35E3-202ENST00000398004 TEX35Q5T0J7 233 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms